RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W MTC1P47018 478 aaKnown RBP18.05■□□□□ 0.48
LIP1YMR298W SGS1P35187 1447 aa17.17■□□□□ 0.34
LIP1YMR298W DRS1P32892 752 aaKnown RBP17.11■□□□□ 0.33
LIP1YMR298W INO80P53115 1489 aa16.93■□□□□ 0.3
LIP1YMR298W TCB3Q03640 1545 aaKnown RBP16.74■□□□□ 0.27
LIP1YMR298W MON2P48563 1636 aaPredicted RBP16.56■□□□□ 0.24
LIP1YMR298W TY1B-DR4Q07793 1604 aa16.51■□□□□ 0.23
LIP1YMR298W SPA2P23201 1466 aaKnown RBP16.39■□□□□ 0.21
LIP1YMR298W SSN2P38931 1420 aa16.34■□□□□ 0.21
LIP1YMR298W SWR1Q05471 1514 aa16.19■□□□□ 0.18
LIP1YMR298W HSL1P34244 1518 aa16.17■□□□□ 0.18
LIP1YMR298W SPT6P23615 1451 aaKnown RBP16.13■□□□□ 0.17
LIP1YMR298W FAP1P53971 965 aa16.11■□□□□ 0.17
LIP1YMR298W HIR3P47171 1648 aa15.87■□□□□ 0.13
LIP1YMR298W XRN1P22147 1528 aaKnown RBP15.74■□□□□ 0.11
LIP1YMR298W DNA2P38859 1522 aa15.73■□□□□ 0.11
LIP1YMR298W KOG1P38873 1557 aa15.7■□□□□ 0.1
LIP1YMR298W REV3P14284 1504 aa15.53■□□□□ 0.08
LIP1YMR298W SIN3P22579 1536 aa15.44■□□□□ 0.06
LIP1YMR298W THO2P53552 1597 aaKnown RBP15.41■□□□□ 0.06
LIP1YMR298W BUD4P47136 1447 aa15.38■□□□□ 0.05
LIP1YMR298W SSK2P53599 1579 aa15.33■□□□□ 0.05
LIP1YMR298W ECM5Q03214 1411 aa15.33■□□□□ 0.04
LIP1YMR298W TAF2P23255 1407 aa15.29■□□□□ 0.04
LIP1YMR298W ESP1Q03018 1630 aa15.2■□□□□ 0.02
LIP1YMR298W ATG2P53855 1592 aa15.19■□□□□ 0.02
LIP1YMR298W MYO2P19524 1574 aaKnown RBP15.15■□□□□ 0.02
LIP1YMR298W PRY3P47033 881 aa15.12■□□□□ 0.01
LIP1YMR298W MDS3P53094 1487 aa15.11■□□□□ 0.01
LIP1YMR298W PRI1P10363 409 aa15.1■□□□□ 0.01
LIP1YMR298W SKI3P17883 1432 aaKnown RBP15.09■□□□□ 0.01
LIP1YMR298W PEP1P32319 1579 aa15.09■□□□□ 0.01
LIP1YMR298W YPK9Q12697 1472 aa15.01□□□□□ -0.01
LIP1YMR298W AAD16Q02895 342 aa14.99□□□□□ -0.01
LIP1YMR298W ISW2Q08773 1120 aa14.92□□□□□ -0.02
LIP1YMR298W DIP2Q12220 943 aaPredicted RBP14.9□□□□□ -0.02
LIP1YMR298W POL1P13382 1468 aa14.89□□□□□ -0.03
LIP1YMR298W SCC2Q04002 1493 aa14.86□□□□□ -0.03
LIP1YMR298W RPO31P04051 1460 aa14.81□□□□□ -0.04
LIP1YMR298W RPG1P38249 964 aaKnown RBP14.8□□□□□ -0.04
LIP1YMR298W STU1P38198 1513 aa14.79□□□□□ -0.04
LIP1YMR298W UFD4P33202 1483 aa14.75□□□□□ -0.05
LIP1YMR298W RKR1Q04781 1562 aa14.73□□□□□ -0.05
LIP1YMR298W CHD1P32657 1468 aa14.7□□□□□ -0.06
LIP1YMR298W YTA7P40340 1379 aa14.7□□□□□ -0.06
LIP1YMR298W TOP2P06786 1428 aaKnown RBP14.69□□□□□ -0.06
LIP1YMR298W YOR1P53049 1477 aa14.68□□□□□ -0.06
LIP1YMR298W YCF1P39109 1515 aaKnown RBP14.67□□□□□ -0.06
LIP1YMR298W BPT1P14772 1559 aa14.64□□□□□ -0.07
LIP1YMR298W SMC4Q12267 1418 aa14.61□□□□□ -0.07
LIP1YMR298W MMS22Q06164 1454 aa14.61□□□□□ -0.07
LIP1YMR298W TY2B-LR1P0C2J3 1770 aa14.6□□□□□ -0.07
LIP1YMR298W TY2B-FP0CX63 1770 aa14.6□□□□□ -0.07
LIP1YMR298W TY2B-GR2P0CX64 1770 aa14.6□□□□□ -0.07
LIP1YMR298W TY2B-CP25384 1770 aa14.6□□□□□ -0.07
LIP1YMR298W TY2B-DR2Q03494 1770 aa14.6□□□□□ -0.07
LIP1YMR298W TY1B-DR1Q03855 1755 aa14.6□□□□□ -0.07
LIP1YMR298W TY2B-DR3Q07791 1770 aaKnown RBP14.6□□□□□ -0.07
LIP1YMR298W TY2B-OR1Q12113 1770 aa14.6□□□□□ -0.07
LIP1YMR298W TY2B-DR1Q12472 1770 aa14.6□□□□□ -0.07
LIP1YMR298W TY2B-OR2Q12501 1770 aa14.6□□□□□ -0.07
LIP1YMR298W RSE1Q04693 1361 aaKnown RBP14.59□□□□□ -0.07
LIP1YMR298W MYO4P32492 1471 aa14.55□□□□□ -0.08
LIP1YMR298W TY1B-DR3Q99231 1755 aa14.5□□□□□ -0.09
LIP1YMR298W TY2B-BQ12491 1770 aa14.46□□□□□ -0.09
LIP1YMR298W TY1B-BRQ12193 1756 aa14.39□□□□□ -0.11
LIP1YMR298W TY1B-GR3Q12316 1755 aa14.39□□□□□ -0.11
LIP1YMR298W TY1B-ORQ92393 1755 aa14.39□□□□□ -0.11
LIP1YMR298W AVT3P36062 692 aa14.39□□□□□ -0.11
LIP1YMR298W CDC25P04821 1589 aa14.38□□□□□ -0.11
LIP1YMR298W TY1B-HO13535 1793 aa14.37□□□□□ -0.11
LIP1YMR298W TY1B-DR5P0C2I2 1755 aa14.37□□□□□ -0.11
LIP1YMR298W TY1B-DR6P0C2I3 1755 aa14.37□□□□□ -0.11
LIP1YMR298W TY1B-LR2P0C2I5 1755 aa14.37□□□□□ -0.11
LIP1YMR298W TY1B-LR3P0C2I6 1755 aaKnown RBP14.37□□□□□ -0.11
LIP1YMR298W TY1B-PR1P0C2I9 1755 aaKnown RBP14.37□□□□□ -0.11
LIP1YMR298W TY1B-PR2P0C2J0 1756 aa14.37□□□□□ -0.11
LIP1YMR298W TY1B-PR3P0C2J1 1755 aaKnown RBP14.37□□□□□ -0.11
LIP1YMR298W TY1B-JR1P47098 1755 aa14.37□□□□□ -0.11
LIP1YMR298W TY1B-ML2Q03434 1755 aaKnown RBP14.37□□□□□ -0.11
LIP1YMR298W TY1B-ER1Q03612 1755 aa14.37□□□□□ -0.11
LIP1YMR298W TY1B-ML1Q04711 1755 aaKnown RBP14.37□□□□□ -0.11
LIP1YMR298W TY1B-GR2Q12269 1755 aa14.37□□□□□ -0.11
LIP1YMR298W TY1B-OLQ12273 1755 aa14.37□□□□□ -0.11
LIP1YMR298W TY1B-PLQ12414 1755 aaKnown RBP14.37□□□□□ -0.11
LIP1YMR298W SAS10Q12136 610 aaPredicted RBP14.37□□□□□ -0.11
LIP1YMR298W SPP41P38904 1435 aa14.35□□□□□ -0.11
LIP1YMR298W TSR3Q12094 313 aaKnown RBP14.35□□□□□ -0.11
LIP1YMR298W RQC2Q12532 1038 aaKnown RBP14.35□□□□□ -0.11
LIP1YMR298W SNQ2P32568 1501 aaKnown RBP14.32□□□□□ -0.12
LIP1YMR298W PAN1P32521 1480 aa14.31□□□□□ -0.12
LIP1YMR298W TAF7Q05021 590 aa14.31□□□□□ -0.12
LIP1YMR298W BFR2Q06631 534 aaKnown RBP14.31□□□□□ -0.12
LIP1YMR298W STH1P32597 1359 aa14.27□□□□□ -0.12
LIP1YMR298W TSC11P40061 1430 aa14.24□□□□□ -0.13
LIP1YMR298W VTH1P40438 1549 aa14.24□□□□□ -0.13
LIP1YMR298W VTH2P40890 1549 aa14.24□□□□□ -0.13
LIP1YMR298W YCK3P39962 524 aa14.22□□□□□ -0.13
LIP1YMR298W ESC1Q03661 1658 aaKnown RBP14.2□□□□□ -0.14
LIP1YMR298W MLP2P40457 1679 aa14.19□□□□□ -0.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms