RNA–Protein interactions for RNA: YMR205C

PFK2, Transcript of Beta subunit of heterooctameric phosphofructokinase, yeastyeast

Gene PFK2, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFK2YMR205C SGS1P35187 1447 aa9.99□□□□□ -0.81
PFK2YMR205C SPA2P23201 1466 aaKnown RBP9.79□□□□□ -0.84
PFK2YMR205C SSN2P38931 1420 aa9.75□□□□□ -0.85
PFK2YMR205C INO80P53115 1489 aa9.51□□□□□ -0.89
PFK2YMR205C DRS1P32892 752 aaKnown RBP9.49□□□□□ -0.89
PFK2YMR205C TCB3Q03640 1545 aaKnown RBP9.25□□□□□ -0.93
PFK2YMR205C TY1B-DR4Q07793 1604 aa9.15□□□□□ -0.94
PFK2YMR205C HSL1P34244 1518 aa9.12□□□□□ -0.95
PFK2YMR205C SKI3P17883 1432 aaKnown RBP9.11□□□□□ -0.95
PFK2YMR205C SPT6P23615 1451 aaKnown RBP9.08□□□□□ -0.96
PFK2YMR205C XRN1P22147 1528 aaKnown RBP9.03□□□□□ -0.96
PFK2YMR205C HIR3P47171 1648 aa8.99□□□□□ -0.97
PFK2YMR205C MMS22Q06164 1454 aa8.96□□□□□ -0.98
PFK2YMR205C RSE1Q04693 1361 aaKnown RBP8.95□□□□□ -0.98
PFK2YMR205C TAF2P23255 1407 aa8.92□□□□□ -0.98
PFK2YMR205C REV3P14284 1504 aa8.9□□□□□ -0.98
PFK2YMR205C CHD1P32657 1468 aa8.86□□□□□ -0.99
PFK2YMR205C NSR1P27476 414 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
PFK2YMR205C THO2P53552 1597 aaKnown RBP8.83□□□□□ -1
PFK2YMR205C SAS10Q12136 610 aaPredicted RBP8.81□□□□□ -1
PFK2YMR205C SSK2P53599 1579 aa8.81□□□□□ -1
PFK2YMR205C SIN3P22579 1536 aa8.78□□□□□ -1
PFK2YMR205C SWR1Q05471 1514 aa8.78□□□□□ -1
PFK2YMR205C NOP2P40991 618 aaKnown RBP8.78□□□□□ -1
PFK2YMR205C STU1P38198 1513 aa8.73□□□□□ -1.01
PFK2YMR205C ESP1Q03018 1630 aa8.73□□□□□ -1.01
PFK2YMR205C UFD4P33202 1483 aa8.72□□□□□ -1.01
PFK2YMR205C BPT1P14772 1559 aa8.71□□□□□ -1.01
PFK2YMR205C TRM732Q03496 1420 aa8.71□□□□□ -1.02
PFK2YMR205C MON2P48563 1636 aaPredicted RBP8.7□□□□□ -1.02
PFK2YMR205C MYO2P19524 1574 aaKnown RBP8.67□□□□□ -1.02
PFK2YMR205C POL1P13382 1468 aa8.66□□□□□ -1.02
PFK2YMR205C SCC2Q04002 1493 aa8.63□□□□□ -1.03
PFK2YMR205C YTA7P40340 1379 aa8.63□□□□□ -1.03
PFK2YMR205C IKI3Q06706 1349 aaKnown RBP8.61□□□□□ -1.03
PFK2YMR205C SSM4P40318 1319 aa8.57□□□□□ -1.04
PFK2YMR205C RKR1Q04781 1562 aa8.53□□□□□ -1.04
PFK2YMR205C BUD4P47136 1447 aa8.53□□□□□ -1.04
PFK2YMR205C ATG2P53855 1592 aa8.53□□□□□ -1.04
PFK2YMR205C YPK9Q12697 1472 aa8.53□□□□□ -1.04
PFK2YMR205C ECM5Q03214 1411 aa8.52□□□□□ -1.05
PFK2YMR205C DNA2P38859 1522 aa8.52□□□□□ -1.05
PFK2YMR205C YOR1P53049 1477 aa8.5□□□□□ -1.05
PFK2YMR205C SPP41P38904 1435 aa8.5□□□□□ -1.05
PFK2YMR205C IFH1P39520 1085 aa8.47□□□□□ -1.05
PFK2YMR205C STH1P32597 1359 aa8.47□□□□□ -1.05
PFK2YMR205C MYO4P32492 1471 aa8.46□□□□□ -1.06
PFK2YMR205C SNQ2P32568 1501 aaKnown RBP8.45□□□□□ -1.06
PFK2YMR205C NUP170P38181 1502 aa8.44□□□□□ -1.06
PFK2YMR205C POL5P39985 1022 aaKnown RBP8.42□□□□□ -1.06
PFK2YMR205C RTT106P40161 455 aa8.42□□□□□ -1.06
PFK2YMR205C ENP1P38333 483 aaKnown RBP8.41□□□□□ -1.06
PFK2YMR205C SPT7P35177 1332 aa8.4□□□□□ -1.07
PFK2YMR205C MLP2P40457 1679 aa8.39□□□□□ -1.07
PFK2YMR205C TAF7Q05021 590 aa8.39□□□□□ -1.07
PFK2YMR205C RPO31P04051 1460 aa8.38□□□□□ -1.07
PFK2YMR205C PDR15Q04182 1529 aaKnown RBP8.38□□□□□ -1.07
PFK2YMR205C PEP1P32319 1579 aa8.38□□□□□ -1.07
PFK2YMR205C TOP2P06786 1428 aaKnown RBP8.37□□□□□ -1.07
PFK2YMR205C GEA1P47102 1408 aaPredicted RBP8.37□□□□□ -1.07
PFK2YMR205C SMC4Q12267 1418 aa8.37□□□□□ -1.07
PFK2YMR205C TY1B-DR3Q99231 1755 aa8.36□□□□□ -1.07
PFK2YMR205C PAN1P32521 1480 aa8.35□□□□□ -1.07
PFK2YMR205C YCF1P39109 1515 aaKnown RBP8.35□□□□□ -1.07
PFK2YMR205C TSC11P40061 1430 aa8.34□□□□□ -1.07
PFK2YMR205C TY2B-LR1P0C2J3 1770 aa8.34□□□□□ -1.07
PFK2YMR205C TY2B-FP0CX63 1770 aa8.34□□□□□ -1.07
PFK2YMR205C TY2B-GR2P0CX64 1770 aa8.34□□□□□ -1.07
PFK2YMR205C TY2B-CP25384 1770 aa8.34□□□□□ -1.07
PFK2YMR205C TY2B-DR2Q03494 1770 aa8.34□□□□□ -1.07
PFK2YMR205C TY1B-DR1Q03855 1755 aa8.34□□□□□ -1.07
PFK2YMR205C TY2B-DR3Q07791 1770 aaKnown RBP8.34□□□□□ -1.07
PFK2YMR205C TY2B-OR1Q12113 1770 aa8.34□□□□□ -1.07
PFK2YMR205C TY2B-DR1Q12472 1770 aa8.34□□□□□ -1.07
PFK2YMR205C TY2B-OR2Q12501 1770 aa8.34□□□□□ -1.07
PFK2YMR205C KOG1P38873 1557 aa8.32□□□□□ -1.08
PFK2YMR205C ULS1Q08562 1619 aa8.3□□□□□ -1.08
PFK2YMR205C MDS3P53094 1487 aa8.3□□□□□ -1.08
PFK2YMR205C PDR10P51533 1564 aa8.29□□□□□ -1.08
PFK2YMR205C TY2B-BQ12491 1770 aa8.29□□□□□ -1.08
PFK2YMR205C LEU3P08638 886 aa8.28□□□□□ -1.08
PFK2YMR205C TY3B-GQ99315 1547 aa8.28□□□□□ -1.08
PFK2YMR205C BFR2Q06631 534 aaKnown RBP8.27□□□□□ -1.09
PFK2YMR205C RQC2Q12532 1038 aaKnown RBP8.24□□□□□ -1.09
PFK2YMR205C PRS1P32895 427 aaKnown RBP8.23□□□□□ -1.09
PFK2YMR205C VPS15P22219 1454 aa8.22□□□□□ -1.09
PFK2YMR205C SEC3P33332 1336 aaKnown RBP8.21□□□□□ -1.09
PFK2YMR205C TY1B-HO13535 1793 aa8.18□□□□□ -1.1
PFK2YMR205C TY1B-DR5P0C2I2 1755 aa8.18□□□□□ -1.1
PFK2YMR205C TY1B-DR6P0C2I3 1755 aa8.18□□□□□ -1.1
PFK2YMR205C TY1B-LR2P0C2I5 1755 aa8.18□□□□□ -1.1
PFK2YMR205C TY1B-LR3P0C2I6 1755 aaKnown RBP8.18□□□□□ -1.1
PFK2YMR205C TY1B-PR1P0C2I9 1755 aaKnown RBP8.18□□□□□ -1.1
PFK2YMR205C TY1B-PR2P0C2J0 1756 aa8.18□□□□□ -1.1
PFK2YMR205C TY1B-PR3P0C2J1 1755 aaKnown RBP8.18□□□□□ -1.1
PFK2YMR205C TY1B-JR1P47098 1755 aa8.18□□□□□ -1.1
PFK2YMR205C TY1B-ML2Q03434 1755 aaKnown RBP8.18□□□□□ -1.1
PFK2YMR205C TY1B-ER1Q03612 1755 aa8.18□□□□□ -1.1
PFK2YMR205C TY1B-ML1Q04711 1755 aaKnown RBP8.18□□□□□ -1.1
PFK2YMR205C TY1B-GR2Q12269 1755 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms