RNA–Protein interactions for RNA: YML010W

SPT5, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT5, Length 3,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT5YML010W SGS1P35187 1447 aa21.44■■□□□ 1.02
SPT5YML010W SPA2P23201 1466 aaKnown RBP20.95■□□□□ 0.94
SPT5YML010W SSN2P38931 1420 aa20.86■□□□□ 0.93
SPT5YML010W INO80P53115 1489 aa20.51■□□□□ 0.87
SPT5YML010W DRS1P32892 752 aaKnown RBP20.34■□□□□ 0.85
SPT5YML010W TCB3Q03640 1545 aaKnown RBP19.99■□□□□ 0.79
SPT5YML010W TY1B-DR4Q07793 1604 aa19.68■□□□□ 0.74
SPT5YML010W HSL1P34244 1518 aa19.6■□□□□ 0.73
SPT5YML010W SPT6P23615 1451 aaKnown RBP19.53■□□□□ 0.72
SPT5YML010W SKI3P17883 1432 aaKnown RBP19.41■□□□□ 0.7
SPT5YML010W XRN1P22147 1528 aaKnown RBP19.39■□□□□ 0.69
SPT5YML010W HIR3P47171 1648 aa19.31■□□□□ 0.68
SPT5YML010W TAF2P23255 1407 aa19.11■□□□□ 0.65
SPT5YML010W MMS22Q06164 1454 aa19.1■□□□□ 0.65
SPT5YML010W REV3P14284 1504 aa19.09■□□□□ 0.65
SPT5YML010W CHD1P32657 1468 aa18.96■□□□□ 0.63
SPT5YML010W SWR1Q05471 1514 aa18.95■□□□□ 0.62
SPT5YML010W THO2P53552 1597 aaKnown RBP18.95■□□□□ 0.62
SPT5YML010W RSE1Q04693 1361 aaKnown RBP18.95■□□□□ 0.62
SPT5YML010W SSK2P53599 1579 aa18.88■□□□□ 0.61
SPT5YML010W SIN3P22579 1536 aa18.86■□□□□ 0.61
SPT5YML010W MON2P48563 1636 aaPredicted RBP18.85■□□□□ 0.61
SPT5YML010W SAS10Q12136 610 aaPredicted RBP18.82■□□□□ 0.6
SPT5YML010W ESP1Q03018 1630 aa18.69■□□□□ 0.58
SPT5YML010W STU1P38198 1513 aa18.69■□□□□ 0.58
SPT5YML010W MYO2P19524 1574 aaKnown RBP18.63■□□□□ 0.57
SPT5YML010W NSR1P27476 414 aaKnown RBP RIP-Chip data18.61■□□□□ 0.57not detected
SPT5YML010W BPT1P14772 1559 aa18.59■□□□□ 0.57
SPT5YML010W POL1P13382 1468 aa18.59■□□□□ 0.57
SPT5YML010W UFD4P33202 1483 aa18.55■□□□□ 0.56
SPT5YML010W YTA7P40340 1379 aa18.54■□□□□ 0.56
SPT5YML010W TRM732Q03496 1420 aa18.54■□□□□ 0.56
SPT5YML010W NOP2P40991 618 aaKnown RBP18.46■□□□□ 0.55
SPT5YML010W SCC2Q04002 1493 aa18.41■□□□□ 0.54
SPT5YML010W IKI3Q06706 1349 aaKnown RBP18.39■□□□□ 0.54
SPT5YML010W BUD4P47136 1447 aa18.37■□□□□ 0.53
SPT5YML010W YPK9Q12697 1472 aa18.35■□□□□ 0.53
SPT5YML010W ATG2P53855 1592 aa18.32■□□□□ 0.52
SPT5YML010W RKR1Q04781 1562 aa18.29■□□□□ 0.52
SPT5YML010W DNA2P38859 1522 aa18.26■□□□□ 0.51
SPT5YML010W ECM5Q03214 1411 aa18.26■□□□□ 0.51
SPT5YML010W YOR1P53049 1477 aa18.24■□□□□ 0.51
SPT5YML010W SSM4P40318 1319 aa18.24■□□□□ 0.51
SPT5YML010W MYO4P32492 1471 aa18.17■□□□□ 0.5
SPT5YML010W STH1P32597 1359 aa18.16■□□□□ 0.5
SPT5YML010W SPP41P38904 1435 aa18.12■□□□□ 0.49
SPT5YML010W IFH1P39520 1085 aa18.12■□□□□ 0.49
SPT5YML010W SNQ2P32568 1501 aaKnown RBP18.09■□□□□ 0.49
SPT5YML010W TAF7Q05021 590 aa18.08■□□□□ 0.48
SPT5YML010W RPO31P04051 1460 aa18.02■□□□□ 0.48
SPT5YML010W TOP2P06786 1428 aaKnown RBP18.02■□□□□ 0.48
SPT5YML010W SMC4Q12267 1418 aa18.01■□□□□ 0.47
SPT5YML010W KOG1P38873 1557 aa18■□□□□ 0.47
SPT5YML010W NUP170P38181 1502 aa17.99■□□□□ 0.47
SPT5YML010W PEP1P32319 1579 aa17.97■□□□□ 0.47
SPT5YML010W POL5P39985 1022 aaKnown RBP17.94■□□□□ 0.46
SPT5YML010W PDR15Q04182 1529 aaKnown RBP17.92■□□□□ 0.46
SPT5YML010W GEA1P47102 1408 aaPredicted RBP17.91■□□□□ 0.46
SPT5YML010W RTT106P40161 455 aa17.91■□□□□ 0.46
SPT5YML010W YCF1P39109 1515 aaKnown RBP17.91■□□□□ 0.46
SPT5YML010W MLP2P40457 1679 aa17.9■□□□□ 0.46
SPT5YML010W MDS3P53094 1487 aa17.89■□□□□ 0.46
SPT5YML010W PAN1P32521 1480 aa17.87■□□□□ 0.45
SPT5YML010W ENP1P38333 483 aaKnown RBP17.85■□□□□ 0.45
SPT5YML010W TY1B-DR3Q99231 1755 aa17.84■□□□□ 0.45
SPT5YML010W TSC11P40061 1430 aa17.83■□□□□ 0.45
SPT5YML010W TY2B-LR1P0C2J3 1770 aa17.83■□□□□ 0.44
SPT5YML010W TY2B-FP0CX63 1770 aa17.83■□□□□ 0.44
SPT5YML010W TY2B-GR2P0CX64 1770 aa17.83■□□□□ 0.44
SPT5YML010W TY2B-CP25384 1770 aa17.83■□□□□ 0.44
SPT5YML010W TY2B-DR2Q03494 1770 aa17.83■□□□□ 0.44
SPT5YML010W TY1B-DR1Q03855 1755 aa17.83■□□□□ 0.44
SPT5YML010W TY2B-DR3Q07791 1770 aaKnown RBP17.83■□□□□ 0.44
SPT5YML010W TY2B-OR1Q12113 1770 aa17.83■□□□□ 0.44
SPT5YML010W TY2B-DR1Q12472 1770 aa17.83■□□□□ 0.44
SPT5YML010W TY2B-OR2Q12501 1770 aa17.83■□□□□ 0.44
SPT5YML010W SPT7P35177 1332 aa17.78■□□□□ 0.44
SPT5YML010W RQC2Q12532 1038 aaKnown RBP17.74■□□□□ 0.43
SPT5YML010W ULS1Q08562 1619 aa17.73■□□□□ 0.43
SPT5YML010W TY2B-BQ12491 1770 aa17.7■□□□□ 0.42
SPT5YML010W TY3B-GQ99315 1547 aa17.65■□□□□ 0.42
SPT5YML010W VPS15P22219 1454 aa17.58■□□□□ 0.4
SPT5YML010W PDR10P51533 1564 aa17.55■□□□□ 0.4
SPT5YML010W LEU3P08638 886 aa17.54■□□□□ 0.4
SPT5YML010W SEC3P33332 1336 aaKnown RBP17.52■□□□□ 0.4
SPT5YML010W TY1B-HO13535 1793 aa17.49■□□□□ 0.39
SPT5YML010W TY1B-DR5P0C2I2 1755 aa17.49■□□□□ 0.39
SPT5YML010W TY1B-DR6P0C2I3 1755 aa17.49■□□□□ 0.39
SPT5YML010W TY1B-LR2P0C2I5 1755 aa17.49■□□□□ 0.39
SPT5YML010W TY1B-LR3P0C2I6 1755 aaKnown RBP17.49■□□□□ 0.39
SPT5YML010W TY1B-PR1P0C2I9 1755 aaKnown RBP17.49■□□□□ 0.39
SPT5YML010W TY1B-PR2P0C2J0 1756 aa17.49■□□□□ 0.39
SPT5YML010W TY1B-PR3P0C2J1 1755 aaKnown RBP17.49■□□□□ 0.39
SPT5YML010W TY1B-JR1P47098 1755 aa17.49■□□□□ 0.39
SPT5YML010W TY1B-ML2Q03434 1755 aaKnown RBP17.49■□□□□ 0.39
SPT5YML010W TY1B-ER1Q03612 1755 aa17.49■□□□□ 0.39
SPT5YML010W TY1B-ML1Q04711 1755 aaKnown RBP17.49■□□□□ 0.39
SPT5YML010W TY1B-GR2Q12269 1755 aa17.49■□□□□ 0.39
SPT5YML010W TY1B-OLQ12273 1755 aa17.49■□□□□ 0.39
SPT5YML010W TY1B-PLQ12414 1755 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms