RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeastyeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP2YLR335W DRS1P32892 752 aaKnown RBP7.43□□□□□ -1.22
NUP2YLR335W FAP1P53971 965 aa7.39□□□□□ -1.23
NUP2YLR335W SGS1P35187 1447 aa7.32□□□□□ -1.24
NUP2YLR335W MTC1P47018 478 aaKnown RBP7.26□□□□□ -1.25
NUP2YLR335W SPA2P23201 1466 aaKnown RBP7.24□□□□□ -1.25
NUP2YLR335W INO80P53115 1489 aa7.17□□□□□ -1.26
NUP2YLR335W SSN2P38931 1420 aa7.11□□□□□ -1.27
NUP2YLR335W PRY3P47033 881 aa6.99□□□□□ -1.29
NUP2YLR335W TCB3Q03640 1545 aaKnown RBP6.93□□□□□ -1.3
NUP2YLR335W SKI3P17883 1432 aaKnown RBP6.75□□□□□ -1.33
NUP2YLR335W TY1B-DR4Q07793 1604 aa6.74□□□□□ -1.33
NUP2YLR335W HSL1P34244 1518 aa6.68□□□□□ -1.34
NUP2YLR335W SPT6P23615 1451 aaKnown RBP6.66□□□□□ -1.34
NUP2YLR335W CHD1P32657 1468 aa6.61□□□□□ -1.35
NUP2YLR335W HIR3P47171 1648 aa6.57□□□□□ -1.36
NUP2YLR335W XRN1P22147 1528 aaKnown RBP6.57□□□□□ -1.36
NUP2YLR335W YCK3P39962 524 aa6.54□□□□□ -1.36
NUP2YLR335W THO2P53552 1597 aaKnown RBP6.53□□□□□ -1.36
NUP2YLR335W HAA1Q12753 694 aaKnown RBP6.53□□□□□ -1.36
NUP2YLR335W SIN3P22579 1536 aa6.53□□□□□ -1.36
NUP2YLR335W BFR2Q06631 534 aaKnown RBP6.52□□□□□ -1.36
NUP2YLR335W MMS22Q06164 1454 aa6.52□□□□□ -1.37
NUP2YLR335W REV3P14284 1504 aa6.51□□□□□ -1.37
NUP2YLR335W AAD16Q02895 342 aa6.51□□□□□ -1.37
NUP2YLR335W MON2P48563 1636 aaPredicted RBP6.47□□□□□ -1.37
NUP2YLR335W SWR1Q05471 1514 aa6.46□□□□□ -1.37
NUP2YLR335W SSK2P53599 1579 aa6.46□□□□□ -1.37
NUP2YLR335W TAF2P23255 1407 aa6.44□□□□□ -1.38
NUP2YLR335W MYO2P19524 1574 aaKnown RBP6.43□□□□□ -1.38
NUP2YLR335W YTA7P40340 1379 aa6.43□□□□□ -1.38
NUP2YLR335W PRI1P10363 409 aa6.41□□□□□ -1.38
NUP2YLR335W POL1P13382 1468 aa6.39□□□□□ -1.39
NUP2YLR335W STU1P38198 1513 aa6.39□□□□□ -1.39
NUP2YLR335W ESP1Q03018 1630 aa6.38□□□□□ -1.39
NUP2YLR335W TFA1P36100 482 aa6.38□□□□□ -1.39
NUP2YLR335W UFD4P33202 1483 aa6.33□□□□□ -1.4
NUP2YLR335W TAF7Q05021 590 aa6.33□□□□□ -1.4
NUP2YLR335W BUD4P47136 1447 aa6.32□□□□□ -1.4
NUP2YLR335W YPK9Q12697 1472 aa6.32□□□□□ -1.4
NUP2YLR335W IKI3Q06706 1349 aaKnown RBP6.31□□□□□ -1.4
NUP2YLR335W AVT3P36062 692 aa6.3□□□□□ -1.4
NUP2YLR335W ECM5Q03214 1411 aa6.3□□□□□ -1.4
NUP2YLR335W MYO4P32492 1471 aa6.29□□□□□ -1.4
NUP2YLR335W DNA2P38859 1522 aa6.27□□□□□ -1.41
NUP2YLR335W TRM732Q03496 1420 aa6.27□□□□□ -1.41
NUP2YLR335W SAS10Q12136 610 aaPredicted RBP6.27□□□□□ -1.41
NUP2YLR335W YOR1P53049 1477 aa6.27□□□□□ -1.41
NUP2YLR335W SPP41P38904 1435 aa6.26□□□□□ -1.41
NUP2YLR335W DIP2Q12220 943 aaPredicted RBP6.26□□□□□ -1.41
NUP2YLR335W ATG2P53855 1592 aa6.25□□□□□ -1.41
NUP2YLR335W SMC4Q12267 1418 aa6.24□□□□□ -1.41
NUP2YLR335W BPT1P14772 1559 aa6.24□□□□□ -1.41
NUP2YLR335W RKR1Q04781 1562 aa6.24□□□□□ -1.41
NUP2YLR335W NOP2P40991 618 aaKnown RBP6.23□□□□□ -1.41
NUP2YLR335W RPO31P04051 1460 aa6.21□□□□□ -1.41
NUP2YLR335W SCC2Q04002 1493 aa6.21□□□□□ -1.41
NUP2YLR335W KOG1P38873 1557 aa6.21□□□□□ -1.42
NUP2YLR335W TOP2P06786 1428 aaKnown RBP6.2□□□□□ -1.42
NUP2YLR335W NUP170P38181 1502 aa6.2□□□□□ -1.42
NUP2YLR335W NSR1P27476 414 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
NUP2YLR335W SNQ2P32568 1501 aaKnown RBP6.18□□□□□ -1.42
NUP2YLR335W STH1P32597 1359 aa6.18□□□□□ -1.42
NUP2YLR335W RSE1Q04693 1361 aaKnown RBP6.15□□□□□ -1.43
NUP2YLR335W PEP1P32319 1579 aa6.14□□□□□ -1.43
NUP2YLR335W YCF1P39109 1515 aaKnown RBP6.13□□□□□ -1.43
NUP2YLR335W SSM4P40318 1319 aa6.13□□□□□ -1.43
NUP2YLR335W ENP1P38333 483 aaKnown RBP6.11□□□□□ -1.43
NUP2YLR335W POL5P39985 1022 aaKnown RBP6.11□□□□□ -1.43
NUP2YLR335W PAN1P32521 1480 aa6.11□□□□□ -1.43
NUP2YLR335W MDS3P53094 1487 aa6.11□□□□□ -1.43
NUP2YLR335W GEA1P47102 1408 aaPredicted RBP6.11□□□□□ -1.43
NUP2YLR335W SEC3P33332 1336 aaKnown RBP6.08□□□□□ -1.44
NUP2YLR335W TSC11P40061 1430 aa6.07□□□□□ -1.44
NUP2YLR335W MLP2P40457 1679 aa6.07□□□□□ -1.44
NUP2YLR335W PDR15Q04182 1529 aaKnown RBP6.07□□□□□ -1.44
NUP2YLR335W IFH1P39520 1085 aa6.07□□□□□ -1.44
NUP2YLR335W TY1B-DR3Q99231 1755 aa6.03□□□□□ -1.44
NUP2YLR335W TY2B-LR1P0C2J3 1770 aa6.03□□□□□ -1.44
NUP2YLR335W TY2B-FP0CX63 1770 aa6.03□□□□□ -1.44
NUP2YLR335W TY2B-GR2P0CX64 1770 aa6.03□□□□□ -1.44
NUP2YLR335W TY2B-CP25384 1770 aa6.03□□□□□ -1.44
NUP2YLR335W TY2B-DR2Q03494 1770 aa6.03□□□□□ -1.44
NUP2YLR335W TY1B-DR1Q03855 1755 aa6.03□□□□□ -1.44
NUP2YLR335W TY2B-DR3Q07791 1770 aaKnown RBP6.03□□□□□ -1.44
NUP2YLR335W TY2B-OR1Q12113 1770 aa6.03□□□□□ -1.44
NUP2YLR335W TY2B-DR1Q12472 1770 aa6.03□□□□□ -1.44
NUP2YLR335W TY2B-OR2Q12501 1770 aa6.03□□□□□ -1.44
NUP2YLR335W ULS1Q08562 1619 aa6.01□□□□□ -1.45
NUP2YLR335W RTT106P40161 455 aa6□□□□□ -1.45
NUP2YLR335W SNT2P53127 1403 aa6□□□□□ -1.45
NUP2YLR335W TY2B-BQ12491 1770 aa5.99□□□□□ -1.45
NUP2YLR335W CAT8P39113 1433 aa5.98□□□□□ -1.45
NUP2YLR335W VTH1P40438 1549 aa5.97□□□□□ -1.45
NUP2YLR335W VTH2P40890 1549 aa5.97□□□□□ -1.45
NUP2YLR335W VPS15P22219 1454 aa5.97□□□□□ -1.45
NUP2YLR335W TSR3Q12094 313 aaKnown RBP5.97□□□□□ -1.45
NUP2YLR335W TY3B-GQ99315 1547 aa5.96□□□□□ -1.45
NUP2YLR335W ISW2Q08773 1120 aa5.96□□□□□ -1.46
NUP2YLR335W TY1B-HO13535 1793 aa5.94□□□□□ -1.46
NUP2YLR335W TY1B-DR5P0C2I2 1755 aa5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms