RNA–Protein interactions for RNA: YLR299W

ECM38, Transcript of Gamma-glutamyltranspeptidase, yeastyeast

Gene ECM38, Length 1,983 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM38YLR299W INO80P53115 1489 aa10.82□□□□□ -0.68
ECM38YLR299W MON2P48563 1636 aaPredicted RBP10.73□□□□□ -0.69
ECM38YLR299W SPA2P23201 1466 aaKnown RBP10.48□□□□□ -0.73
ECM38YLR299W SGS1P35187 1447 aa10.48□□□□□ -0.73
ECM38YLR299W SSN2P38931 1420 aa10.34□□□□□ -0.75
ECM38YLR299W RSE1Q04693 1361 aaKnown RBP10.33□□□□□ -0.76
ECM38YLR299W DNA2P38859 1522 aa10.23□□□□□ -0.77
ECM38YLR299W KOG1P38873 1557 aa10.04□□□□□ -0.8
ECM38YLR299W DRS1P32892 752 aaKnown RBP9.97□□□□□ -0.81
ECM38YLR299W SWR1Q05471 1514 aa9.94□□□□□ -0.82
ECM38YLR299W SKI3P17883 1432 aaKnown RBP9.92□□□□□ -0.82
ECM38YLR299W RQC2Q12532 1038 aaKnown RBP9.86□□□□□ -0.83
ECM38YLR299W TCB3Q03640 1545 aaKnown RBP9.67□□□□□ -0.86
ECM38YLR299W MTC1P47018 478 aaKnown RBP9.66□□□□□ -0.86
ECM38YLR299W NOP2P40991 618 aaKnown RBP9.61□□□□□ -0.87
ECM38YLR299W NSR1P27476 414 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
ECM38YLR299W CHD1P32657 1468 aa9.57□□□□□ -0.88
ECM38YLR299W MMS22Q06164 1454 aa9.56□□□□□ -0.88
ECM38YLR299W TY1B-DR4Q07793 1604 aa9.52□□□□□ -0.89
ECM38YLR299W HSL1P34244 1518 aa9.49□□□□□ -0.89
ECM38YLR299W XRN1P22147 1528 aaKnown RBP9.45□□□□□ -0.9
ECM38YLR299W SPT6P23615 1451 aaKnown RBP9.42□□□□□ -0.9
ECM38YLR299W UFD4P33202 1483 aa9.37□□□□□ -0.91
ECM38YLR299W HIR3P47171 1648 aa9.36□□□□□ -0.91
ECM38YLR299W BFR2Q06631 534 aaKnown RBP9.35□□□□□ -0.91
ECM38YLR299W MIF2P35201 549 aa9.34□□□□□ -0.91
ECM38YLR299W REV3P14284 1504 aa9.29□□□□□ -0.92
ECM38YLR299W TFA1P36100 482 aa9.28□□□□□ -0.92
ECM38YLR299W TRM732Q03496 1420 aa9.26□□□□□ -0.93
ECM38YLR299W SIN3P22579 1536 aa9.26□□□□□ -0.93
ECM38YLR299W THO2P53552 1597 aaKnown RBP9.26□□□□□ -0.93
ECM38YLR299W TAF7Q05021 590 aa9.25□□□□□ -0.93
ECM38YLR299W SSK2P53599 1579 aa9.24□□□□□ -0.93
ECM38YLR299W ECM5Q03214 1411 aa9.24□□□□□ -0.93
ECM38YLR299W STU1P38198 1513 aa9.21□□□□□ -0.93
ECM38YLR299W IKI3Q06706 1349 aaKnown RBP9.19□□□□□ -0.94
ECM38YLR299W SPP41P38904 1435 aa9.18□□□□□ -0.94
ECM38YLR299W TAF2P23255 1407 aa9.17□□□□□ -0.94
ECM38YLR299W POL1P13382 1468 aa9.16□□□□□ -0.94
ECM38YLR299W MYO2P19524 1574 aaKnown RBP9.15□□□□□ -0.95
ECM38YLR299W SAS10Q12136 610 aaPredicted RBP9.14□□□□□ -0.95
ECM38YLR299W YTA7P40340 1379 aa9.14□□□□□ -0.95
ECM38YLR299W ENP1P38333 483 aaKnown RBP9.12□□□□□ -0.95
ECM38YLR299W BPT1P14772 1559 aa9.11□□□□□ -0.95
ECM38YLR299W ESP1Q03018 1630 aa9.09□□□□□ -0.95
ECM38YLR299W SCC2Q04002 1493 aa9.08□□□□□ -0.96
ECM38YLR299W NUP170P38181 1502 aa9.08□□□□□ -0.96
ECM38YLR299W SSM4P40318 1319 aa9.08□□□□□ -0.96
ECM38YLR299W BUD4P47136 1447 aa9.07□□□□□ -0.96
ECM38YLR299W STH1P32597 1359 aa9.02□□□□□ -0.97
ECM38YLR299W POL5P39985 1022 aaKnown RBP9□□□□□ -0.97
ECM38YLR299W MDS3P53094 1487 aa9□□□□□ -0.97
ECM38YLR299W MYO4P32492 1471 aa8.98□□□□□ -0.97
ECM38YLR299W YPK9Q12697 1472 aa8.97□□□□□ -0.97
ECM38YLR299W SPT7P35177 1332 aa8.96□□□□□ -0.97
ECM38YLR299W YOR1P53049 1477 aa8.96□□□□□ -0.97
ECM38YLR299W YFR006WP43590 535 aa8.93□□□□□ -0.98
ECM38YLR299W RKR1Q04781 1562 aa8.91□□□□□ -0.98
ECM38YLR299W SNQ2P32568 1501 aaKnown RBP8.91□□□□□ -0.98
ECM38YLR299W SEC3P33332 1336 aaKnown RBP8.9□□□□□ -0.98
ECM38YLR299W PRS1P32895 427 aaKnown RBP8.88□□□□□ -0.99
ECM38YLR299W SMC4Q12267 1418 aa8.86□□□□□ -0.99
ECM38YLR299W RTT106P40161 455 aa8.86□□□□□ -0.99
ECM38YLR299W ATG2P53855 1592 aa8.85□□□□□ -0.99
ECM38YLR299W PAN1P32521 1480 aa8.85□□□□□ -0.99
ECM38YLR299W PEP1P32319 1579 aa8.85□□□□□ -0.99
ECM38YLR299W PDR10P51533 1564 aa8.84□□□□□ -0.99
ECM38YLR299W EBP2P36049 427 aaKnown RBP8.83□□□□□ -1
ECM38YLR299W CAB3P36076 571 aa8.83□□□□□ -1
ECM38YLR299W MLP2P40457 1679 aa8.83□□□□□ -1
ECM38YLR299W YCF1P39109 1515 aaKnown RBP8.83□□□□□ -1
ECM38YLR299W TSC11P40061 1430 aa8.83□□□□□ -1
ECM38YLR299W GEA1P47102 1408 aaPredicted RBP8.83□□□□□ -1
ECM38YLR299W YPR148CQ06523 435 aa8.82□□□□□ -1
ECM38YLR299W PDR15Q04182 1529 aaKnown RBP8.79□□□□□ -1
ECM38YLR299W RPO31P04051 1460 aa8.79□□□□□ -1
ECM38YLR299W TOP2P06786 1428 aaKnown RBP8.79□□□□□ -1
ECM38YLR299W IFH1P39520 1085 aa8.77□□□□□ -1
ECM38YLR299W SRB8P25648 1427 aa8.73□□□□□ -1.01
ECM38YLR299W TY3B-GQ99315 1547 aa8.73□□□□□ -1.01
ECM38YLR299W ULS1Q08562 1619 aa8.72□□□□□ -1.01
ECM38YLR299W YLR419WQ06698 1435 aaKnown RBP8.7□□□□□ -1.02
ECM38YLR299W ABP1P15891 592 aaKnown RBP8.7□□□□□ -1.02
ECM38YLR299W URN1Q06525 465 aaKnown RBP8.69□□□□□ -1.02
ECM38YLR299W VPS15P22219 1454 aa8.68□□□□□ -1.02
ECM38YLR299W TY1B-DR3Q99231 1755 aa8.68□□□□□ -1.02
ECM38YLR299W LEU3P08638 886 aa8.67□□□□□ -1.02
ECM38YLR299W CFT1Q06632 1357 aaKnown RBP8.67□□□□□ -1.02
ECM38YLR299W PSD2P53037 1138 aaKnown RBP8.65□□□□□ -1.02
ECM38YLR299W TY2B-LR1P0C2J3 1770 aa8.64□□□□□ -1.03
ECM38YLR299W TY2B-FP0CX63 1770 aa8.64□□□□□ -1.03
ECM38YLR299W TY2B-GR2P0CX64 1770 aa8.64□□□□□ -1.03
ECM38YLR299W TY2B-CP25384 1770 aa8.64□□□□□ -1.03
ECM38YLR299W TY2B-DR2Q03494 1770 aa8.64□□□□□ -1.03
ECM38YLR299W TY1B-DR1Q03855 1755 aa8.64□□□□□ -1.03
ECM38YLR299W TY2B-DR3Q07791 1770 aaKnown RBP8.64□□□□□ -1.03
ECM38YLR299W TY2B-OR1Q12113 1770 aa8.64□□□□□ -1.03
ECM38YLR299W TY2B-DR1Q12472 1770 aa8.64□□□□□ -1.03
ECM38YLR299W TY2B-OR2Q12501 1770 aa8.64□□□□□ -1.03
ECM38YLR299W NUP159P40477 1460 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms