RNA–Protein interactions for RNA: YLR146C

SPE4, Transcript of Spermine synthase, yeastyeast

Gene SPE4, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE4YLR146C MTC1P47018 478 aaKnown RBP16.5■□□□□ 0.23
SPE4YLR146C FAP1P53971 965 aa16.09■□□□□ 0.17
SPE4YLR146C PRY3P47033 881 aa15.18■□□□□ 0.02
SPE4YLR146C AAD16Q02895 342 aa14.59□□□□□ -0.07
SPE4YLR146C PRI1P10363 409 aa14.55□□□□□ -0.08
SPE4YLR146C DRS1P32892 752 aaKnown RBP14.47□□□□□ -0.09
SPE4YLR146C YCK3P39962 524 aa14.33□□□□□ -0.12
SPE4YLR146C HAA1Q12753 694 aaKnown RBP14.2□□□□□ -0.14
SPE4YLR146C ISW2Q08773 1120 aa13.92□□□□□ -0.18
SPE4YLR146C RPG1P38249 964 aaKnown RBP13.79□□□□□ -0.2
SPE4YLR146C TSR3Q12094 313 aaKnown RBP13.67□□□□□ -0.22
SPE4YLR146C MRPL32P25348 183 aa13.14□□□□□ -0.31
SPE4YLR146C YGL015CP33199 130 aa12.92□□□□□ -0.34
SPE4YLR146C DIP2Q12220 943 aaPredicted RBP12.91□□□□□ -0.34
SPE4YLR146C RSE1Q04693 1361 aaKnown RBP12.81□□□□□ -0.36
SPE4YLR146C REB1P21538 810 aa12.51□□□□□ -0.41
SPE4YLR146C RPL17AP05740 184 aaKnown RBP12.46□□□□□ -0.41
SPE4YLR146C RPL17BP46990 184 aaKnown RBP12.46□□□□□ -0.41
SPE4YLR146C BFR2Q06631 534 aaKnown RBP12.38□□□□□ -0.43
SPE4YLR146C BUD31P25337 157 aaPredicted RBP12.37□□□□□ -0.43
SPE4YLR146C CDC27P38042 758 aa12.29□□□□□ -0.44
SPE4YLR146C AVT3P36062 692 aa12.21□□□□□ -0.45
SPE4YLR146C UBP10P53874 792 aaPredicted RBP12.12□□□□□ -0.47
SPE4YLR146C MAP2P38174 421 aaKnown RBP12.04□□□□□ -0.48
SPE4YLR146C YKR023WP36119 530 aaKnown RBP11.99□□□□□ -0.49
SPE4YLR146C SPT21P35209 758 aa11.88□□□□□ -0.51
SPE4YLR146C TFC8Q12308 588 aa11.74□□□□□ -0.53
SPE4YLR146C HOP09932 586 aa11.73□□□□□ -0.53
SPE4YLR146C DCD1P06773 312 aa11.71□□□□□ -0.53
SPE4YLR146C SPA2P23201 1466 aaKnown RBP11.7□□□□□ -0.54
SPE4YLR146C SIS1P25294 352 aaKnown RBP11.64□□□□□ -0.55
SPE4YLR146C TIF4632P39936 914 aaKnown RBP11.6□□□□□ -0.55
SPE4YLR146C SCY1P53009 804 aa11.59□□□□□ -0.55
SPE4YLR146C TGL3P40308 642 aa11.58□□□□□ -0.56
SPE4YLR146C UBP9P39967 754 aa11.56□□□□□ -0.56
SPE4YLR146C SLX5P32828 619 aaKnown RBP11.52□□□□□ -0.57
SPE4YLR146C SGS1P35187 1447 aa11.52□□□□□ -0.57
SPE4YLR146C TFA1P36100 482 aa11.46□□□□□ -0.57
SPE4YLR146C SSN2P38931 1420 aa11.41□□□□□ -0.58
SPE4YLR146C BCH2P36122 765 aa11.31□□□□□ -0.6
SPE4YLR146C SKI3P17883 1432 aaKnown RBP11.25□□□□□ -0.61
SPE4YLR146C RIM101P33400 625 aa11.2□□□□□ -0.62
SPE4YLR146C INO80P53115 1489 aa11.16□□□□□ -0.62
SPE4YLR146C MST1P07236 462 aa10.98□□□□□ -0.65
SPE4YLR146C YBL029C-AQ3E756 94 aa10.97□□□□□ -0.65
SPE4YLR146C EPS1P40557 701 aa10.95□□□□□ -0.66
SPE4YLR146C NOP2P40991 618 aaKnown RBP10.95□□□□□ -0.66
SPE4YLR146C BDF1P35817 686 aa10.94□□□□□ -0.66
SPE4YLR146C YOR238WQ08634 303 aa10.86□□□□□ -0.67
SPE4YLR146C VNX1P42839 908 aa10.8□□□□□ -0.68
SPE4YLR146C OXP1P28273 1286 aa10.78□□□□□ -0.68
SPE4YLR146C NSR1P27476 414 aaKnown RBP RIP-Chip data10.77□□□□□ -0.69not detected
SPE4YLR146C CHD1P32657 1468 aa10.76□□□□□ -0.69
SPE4YLR146C SPP1Q03012 353 aa10.69□□□□□ -0.7
SPE4YLR146C PTP3P40048 928 aa10.65□□□□□ -0.7
SPE4YLR146C TCB3Q03640 1545 aaKnown RBP10.64□□□□□ -0.71
SPE4YLR146C MMS22Q06164 1454 aa10.64□□□□□ -0.71
SPE4YLR146C YAP5P40574 245 aa10.64□□□□□ -0.71
SPE4YLR146C WSC3Q12215 556 aa10.61□□□□□ -0.71
SPE4YLR146C YIL055CP40523 627 aaKnown RBP10.6□□□□□ -0.71
SPE4YLR146C AIR2Q12476 344 aaKnown RBP10.6□□□□□ -0.71
SPE4YLR146C FKH1P40466 484 aa10.56□□□□□ -0.72
SPE4YLR146C BBC1P47068 1157 aa10.55□□□□□ -0.72
SPE4YLR146C XRN1P22147 1528 aaKnown RBP10.53□□□□□ -0.72
SPE4YLR146C YJL171CP46992 396 aa10.53□□□□□ -0.72
SPE4YLR146C TIF11P38912 153 aaKnown RBP10.52□□□□□ -0.73
SPE4YLR146C UFD4P33202 1483 aa10.48□□□□□ -0.73
SPE4YLR146C AI2P03876 854 aa10.47□□□□□ -0.73
SPE4YLR146C RSM7P47150 247 aa10.47□□□□□ -0.73
SPE4YLR146C GTT3P39996 337 aa10.42□□□□□ -0.74
SPE4YLR146C TY1B-DR4Q07793 1604 aa10.41□□□□□ -0.74
SPE4YLR146C LDB19Q12502 818 aa10.37□□□□□ -0.75
SPE4YLR146C RQC2Q12532 1038 aaKnown RBP10.37□□□□□ -0.75
SPE4YLR146C HSL1P34244 1518 aa10.37□□□□□ -0.75
SPE4YLR146C SPP41P38904 1435 aa10.34□□□□□ -0.75
SPE4YLR146C ENP1P38333 483 aaKnown RBP10.34□□□□□ -0.75
SPE4YLR146C BMT6Q12291 365 aa10.32□□□□□ -0.76
SPE4YLR146C ULI1P43604 169 aa10.31□□□□□ -0.76
SPE4YLR146C IOC2Q12072 812 aa10.31□□□□□ -0.76
SPE4YLR146C SPT6P23615 1451 aaKnown RBP10.3□□□□□ -0.76
SPE4YLR146C THO2P53552 1597 aaKnown RBP10.29□□□□□ -0.76
SPE4YLR146C YAH1Q12184 172 aaKnown RBP10.28□□□□□ -0.76
SPE4YLR146C TRM732Q03496 1420 aa10.27□□□□□ -0.77
SPE4YLR146C IKI3Q06706 1349 aaKnown RBP10.27□□□□□ -0.77
SPE4YLR146C SIN3P22579 1536 aa10.26□□□□□ -0.77
SPE4YLR146C HIR3P47171 1648 aa10.23□□□□□ -0.77
SPE4YLR146C CAB3P36076 571 aa10.23□□□□□ -0.77
SPE4YLR146C STU1P38198 1513 aa10.23□□□□□ -0.77
SPE4YLR146C PIB1Q06651 286 aa10.21□□□□□ -0.77
SPE4YLR146C REV3P14284 1504 aa10.21□□□□□ -0.78
SPE4YLR146C SSK2P53599 1579 aa10.19□□□□□ -0.78
SPE4YLR146C YTA7P40340 1379 aa10.19□□□□□ -0.78
SPE4YLR146C EBP2P36049 427 aaKnown RBP10.19□□□□□ -0.78
SPE4YLR146C MON2P48563 1636 aaPredicted RBP10.18□□□□□ -0.78
SPE4YLR146C STH1P32597 1359 aa10.18□□□□□ -0.78
SPE4YLR146C MSB4Q12317 492 aa10.16□□□□□ -0.78
SPE4YLR146C MYO2P19524 1574 aaKnown RBP10.15□□□□□ -0.78
SPE4YLR146C NUP170P38181 1502 aa10.15□□□□□ -0.78
SPE4YLR146C SSP1P38871 571 aa10.14□□□□□ -0.79
SPE4YLR146C POL1P13382 1468 aa10.13□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms