RNA–Protein interactions for RNA: YLR088W

GAA1, Transcript of Subunit of the GPI:protein transamidase complex, yeastyeast

Gene GAA1, Length 1,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAA1YLR088W DRS1P32892 752 aaKnown RBP12.79□□□□□ -0.36
GAA1YLR088W TFA1P36100 482 aa12.04□□□□□ -0.48
GAA1YLR088W BFR2Q06631 534 aaKnown RBP11.7□□□□□ -0.54
GAA1YLR088W RQC2Q12532 1038 aaKnown RBP11.61□□□□□ -0.55
GAA1YLR088W MON2P48563 1636 aaPredicted RBP11.49□□□□□ -0.57
GAA1YLR088W INO80P53115 1489 aa11.41□□□□□ -0.58
GAA1YLR088W TAF7Q05021 590 aa11.32□□□□□ -0.6
GAA1YLR088W MTC1P47018 478 aaKnown RBP11.3□□□□□ -0.6
GAA1YLR088W SWR1Q05471 1514 aa10.91□□□□□ -0.66
GAA1YLR088W DNA2P38859 1522 aa10.9□□□□□ -0.66
GAA1YLR088W TCB3Q03640 1545 aaKnown RBP10.83□□□□□ -0.68
GAA1YLR088W TY1B-DR4Q07793 1604 aa10.8□□□□□ -0.68
GAA1YLR088W KOG1P38873 1557 aa10.76□□□□□ -0.69
GAA1YLR088W AVT3P36062 692 aa10.71□□□□□ -0.69
GAA1YLR088W SGS1P35187 1447 aa10.58□□□□□ -0.72
GAA1YLR088W RSE1Q04693 1361 aaKnown RBP10.48□□□□□ -0.73
GAA1YLR088W DMA1P38823 416 aa10.47□□□□□ -0.73
GAA1YLR088W HSL1P34244 1518 aa10.4□□□□□ -0.74
GAA1YLR088W DIP2Q12220 943 aaPredicted RBP10.4□□□□□ -0.74
GAA1YLR088W SPT6P23615 1451 aaKnown RBP10.38□□□□□ -0.75
GAA1YLR088W LEO1P38439 464 aa10.32□□□□□ -0.76
GAA1YLR088W SPA2P23201 1466 aaKnown RBP10.25□□□□□ -0.77
GAA1YLR088W ECM5Q03214 1411 aa10.16□□□□□ -0.78
GAA1YLR088W HIR3P47171 1648 aa10.16□□□□□ -0.78
GAA1YLR088W THO2P53552 1597 aaKnown RBP10.13□□□□□ -0.79
GAA1YLR088W BUD4P47136 1447 aa10.1□□□□□ -0.79
GAA1YLR088W MDS3P53094 1487 aa10.01□□□□□ -0.81
GAA1YLR088W XRN1P22147 1528 aaKnown RBP9.94□□□□□ -0.82
GAA1YLR088W PEP1P32319 1579 aa9.92□□□□□ -0.82
GAA1YLR088W REV3P14284 1504 aa9.84□□□□□ -0.83
GAA1YLR088W ATG2P53855 1592 aa9.84□□□□□ -0.84
GAA1YLR088W BPT1P14772 1559 aa9.74□□□□□ -0.85
GAA1YLR088W SSN2P38931 1420 aa9.73□□□□□ -0.85
GAA1YLR088W LEU3P08638 886 aa9.7□□□□□ -0.86
GAA1YLR088W SIN3P22579 1536 aa9.7□□□□□ -0.86
GAA1YLR088W SSK2P53599 1579 aa9.65□□□□□ -0.86
GAA1YLR088W SKI3P17883 1432 aaKnown RBP9.61□□□□□ -0.87
GAA1YLR088W TAF2P23255 1407 aa9.59□□□□□ -0.87
GAA1YLR088W YCF1P39109 1515 aaKnown RBP9.59□□□□□ -0.88
GAA1YLR088W PTP3P40048 928 aa9.56□□□□□ -0.88
GAA1YLR088W ESP1Q03018 1630 aa9.53□□□□□ -0.88
GAA1YLR088W DMA2P53924 522 aa9.49□□□□□ -0.89
GAA1YLR088W SAS10Q12136 610 aaPredicted RBP9.47□□□□□ -0.89
GAA1YLR088W UFD4P33202 1483 aa9.47□□□□□ -0.89
GAA1YLR088W YPK9Q12697 1472 aa9.44□□□□□ -0.9
GAA1YLR088W ABP1P15891 592 aaKnown RBP9.44□□□□□ -0.9
GAA1YLR088W SCC2Q04002 1493 aa9.43□□□□□ -0.9
GAA1YLR088W IFH1P39520 1085 aa9.42□□□□□ -0.9
GAA1YLR088W MYO2P19524 1574 aaKnown RBP9.39□□□□□ -0.91
GAA1YLR088W RPO31P04051 1460 aa9.38□□□□□ -0.91
GAA1YLR088W NAP1P25293 417 aaKnown RBP9.38□□□□□ -0.91
GAA1YLR088W CDC25P04821 1589 aa9.35□□□□□ -0.91
GAA1YLR088W CHD1P32657 1468 aa9.35□□□□□ -0.91
GAA1YLR088W MET5P47169 1442 aa9.35□□□□□ -0.91
GAA1YLR088W AIM44Q99299 758 aa9.34□□□□□ -0.91
GAA1YLR088W RLF2Q12495 606 aa9.32□□□□□ -0.92
GAA1YLR088W DNF1P32660 1571 aa9.31□□□□□ -0.92
GAA1YLR088W IOC4Q04213 475 aa9.31□□□□□ -0.92
GAA1YLR088W TY2B-LR1P0C2J3 1770 aa9.3□□□□□ -0.92
GAA1YLR088W TY2B-FP0CX63 1770 aa9.3□□□□□ -0.92
GAA1YLR088W TY2B-GR2P0CX64 1770 aa9.3□□□□□ -0.92
GAA1YLR088W TY2B-CP25384 1770 aa9.3□□□□□ -0.92
GAA1YLR088W TY2B-DR2Q03494 1770 aa9.3□□□□□ -0.92
GAA1YLR088W TY1B-DR1Q03855 1755 aa9.3□□□□□ -0.92
GAA1YLR088W TY2B-DR3Q07791 1770 aaKnown RBP9.3□□□□□ -0.92
GAA1YLR088W TY2B-OR1Q12113 1770 aa9.3□□□□□ -0.92
GAA1YLR088W TY2B-DR1Q12472 1770 aa9.3□□□□□ -0.92
GAA1YLR088W TY2B-OR2Q12501 1770 aa9.3□□□□□ -0.92
GAA1YLR088W ESC1Q03661 1658 aaKnown RBP9.29□□□□□ -0.92
GAA1YLR088W TY1B-BRQ12193 1756 aa9.28□□□□□ -0.92
GAA1YLR088W TY1B-GR3Q12316 1755 aa9.28□□□□□ -0.92
GAA1YLR088W TY1B-ORQ92393 1755 aa9.28□□□□□ -0.92
GAA1YLR088W RPN1P38764 993 aaKnown RBP9.26□□□□□ -0.93
GAA1YLR088W PAN1P32521 1480 aa9.25□□□□□ -0.93
GAA1YLR088W LTE1P07866 1435 aa9.25□□□□□ -0.93
GAA1YLR088W RKR1Q04781 1562 aa9.24□□□□□ -0.93
GAA1YLR088W RPA190P10964 1664 aaKnown RBP9.21□□□□□ -0.93
GAA1YLR088W TOP2P06786 1428 aaKnown RBP9.21□□□□□ -0.94
GAA1YLR088W SSP1P38871 571 aa9.2□□□□□ -0.94
GAA1YLR088W ORC1P54784 914 aaPredicted RBP9.19□□□□□ -0.94
GAA1YLR088W TY1B-HO13535 1793 aa9.18□□□□□ -0.94
GAA1YLR088W TY1B-DR5P0C2I2 1755 aa9.18□□□□□ -0.94
GAA1YLR088W TY1B-DR6P0C2I3 1755 aa9.18□□□□□ -0.94
GAA1YLR088W TY1B-LR2P0C2I5 1755 aa9.18□□□□□ -0.94
GAA1YLR088W TY1B-LR3P0C2I6 1755 aaKnown RBP9.18□□□□□ -0.94
GAA1YLR088W TY1B-PR1P0C2I9 1755 aaKnown RBP9.18□□□□□ -0.94
GAA1YLR088W TY1B-PR2P0C2J0 1756 aa9.18□□□□□ -0.94
GAA1YLR088W TY1B-PR3P0C2J1 1755 aaKnown RBP9.18□□□□□ -0.94
GAA1YLR088W TY1B-JR1P47098 1755 aa9.18□□□□□ -0.94
GAA1YLR088W TY1B-ML2Q03434 1755 aaKnown RBP9.18□□□□□ -0.94
GAA1YLR088W TY1B-ER1Q03612 1755 aa9.18□□□□□ -0.94
GAA1YLR088W TY1B-ML1Q04711 1755 aaKnown RBP9.18□□□□□ -0.94
GAA1YLR088W TY1B-GR2Q12269 1755 aa9.18□□□□□ -0.94
GAA1YLR088W TY1B-OLQ12273 1755 aa9.18□□□□□ -0.94
GAA1YLR088W TY1B-PLQ12414 1755 aaKnown RBP9.18□□□□□ -0.94
GAA1YLR088W TY2B-BQ12491 1770 aa9.18□□□□□ -0.94
GAA1YLR088W MIF2P35201 549 aa9.18□□□□□ -0.94
GAA1YLR088W BNI1P41832 1953 aa9.16□□□□□ -0.94
GAA1YLR088W TY1B-DR3Q99231 1755 aa9.15□□□□□ -0.94
GAA1YLR088W MMS22Q06164 1454 aa9.13□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms