RNA–Protein interactions for RNA: YLR073C

RFU1, Transcript of Protein that inhibits Doa4p deubiquitinating activity, yeastyeast

Gene RFU1, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFU1YLR073C FAP1P53971 965 aa13.91□□□□□ -0.18
RFU1YLR073C MTC1P47018 478 aaKnown RBP13.24□□□□□ -0.29
RFU1YLR073C PRY3P47033 881 aa13.16□□□□□ -0.3
RFU1YLR073C YCK3P39962 524 aa12.41□□□□□ -0.42
RFU1YLR073C AAD16Q02895 342 aa12.33□□□□□ -0.44
RFU1YLR073C HAA1Q12753 694 aaKnown RBP12.26□□□□□ -0.45
RFU1YLR073C PRI1P10363 409 aa12.18□□□□□ -0.46
RFU1YLR073C TSR3Q12094 313 aaKnown RBP11.4□□□□□ -0.58
RFU1YLR073C ISW2Q08773 1120 aa11.35□□□□□ -0.59
RFU1YLR073C RPG1P38249 964 aaKnown RBP11.29□□□□□ -0.6
RFU1YLR073C YGL015CP33199 130 aa11.03□□□□□ -0.64
RFU1YLR073C MRPL32P25348 183 aa10.96□□□□□ -0.65
RFU1YLR073C BUD31P25337 157 aaPredicted RBP10.92□□□□□ -0.66
RFU1YLR073C DRS1P32892 752 aaKnown RBP10.54□□□□□ -0.72
RFU1YLR073C SIS1P25294 352 aaKnown RBP10.19□□□□□ -0.78
RFU1YLR073C CDC27P38042 758 aa10.11□□□□□ -0.79
RFU1YLR073C RSE1Q04693 1361 aaKnown RBP10.08□□□□□ -0.8
RFU1YLR073C UBP10P53874 792 aaPredicted RBP10.06□□□□□ -0.8
RFU1YLR073C MAP2P38174 421 aaKnown RBP9.99□□□□□ -0.81
RFU1YLR073C REB1P21538 810 aa9.98□□□□□ -0.81
RFU1YLR073C DIP2Q12220 943 aaPredicted RBP9.91□□□□□ -0.82
RFU1YLR073C UBP9P39967 754 aa9.89□□□□□ -0.83
RFU1YLR073C RPL17AP05740 184 aaKnown RBP9.87□□□□□ -0.83
RFU1YLR073C RPL17BP46990 184 aaKnown RBP9.87□□□□□ -0.83
RFU1YLR073C YKR023WP36119 530 aaKnown RBP9.65□□□□□ -0.86
RFU1YLR073C TGL3P40308 642 aa9.65□□□□□ -0.86
RFU1YLR073C TIF4632P39936 914 aaKnown RBP9.64□□□□□ -0.87
RFU1YLR073C INO80P53115 1489 aa9.59□□□□□ -0.87
RFU1YLR073C MON2P48563 1636 aaPredicted RBP9.56□□□□□ -0.88
RFU1YLR073C SCY1P53009 804 aa9.46□□□□□ -0.9
RFU1YLR073C SLX5P32828 619 aaKnown RBP9.45□□□□□ -0.9
RFU1YLR073C TFC8Q12308 588 aa9.45□□□□□ -0.9
RFU1YLR073C DCD1P06773 312 aa9.44□□□□□ -0.9
RFU1YLR073C HOP09932 586 aa9.43□□□□□ -0.9
RFU1YLR073C SPT21P35209 758 aa9.34□□□□□ -0.91
RFU1YLR073C YBL029C-AQ3E756 94 aa9.16□□□□□ -0.94
RFU1YLR073C DNA2P38859 1522 aa9.15□□□□□ -0.95
RFU1YLR073C BCH2P36122 765 aa9.07□□□□□ -0.96
RFU1YLR073C MST1P07236 462 aa9.06□□□□□ -0.96
RFU1YLR073C AVT3P36062 692 aa9.06□□□□□ -0.96
RFU1YLR073C SWR1Q05471 1514 aa9□□□□□ -0.97
RFU1YLR073C VNX1P42839 908 aa8.99□□□□□ -0.97
RFU1YLR073C AIR2Q12476 344 aaKnown RBP8.94□□□□□ -0.98
RFU1YLR073C YJL171CP46992 396 aa8.92□□□□□ -0.98
RFU1YLR073C KOG1P38873 1557 aa8.91□□□□□ -0.98
RFU1YLR073C YOR238WQ08634 303 aa8.9□□□□□ -0.98
RFU1YLR073C SPP1Q03012 353 aa8.89□□□□□ -0.99
RFU1YLR073C FKH1P40466 484 aa8.84□□□□□ -0.99
RFU1YLR073C TY1B-DR4Q07793 1604 aa8.76□□□□□ -1.01
RFU1YLR073C WSC3Q12215 556 aa8.73□□□□□ -1.01
RFU1YLR073C TCB3Q03640 1545 aaKnown RBP8.72□□□□□ -1.01
RFU1YLR073C BDF1P35817 686 aa8.72□□□□□ -1.01
RFU1YLR073C NSR1P27476 414 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
RFU1YLR073C EPS1P40557 701 aa8.7□□□□□ -1.02
RFU1YLR073C TIF11P38912 153 aaKnown RBP8.69□□□□□ -1.02
RFU1YLR073C BMT6Q12291 365 aa8.66□□□□□ -1.02
RFU1YLR073C RIM101P33400 625 aa8.61□□□□□ -1.03
RFU1YLR073C YAP5P40574 245 aa8.59□□□□□ -1.03
RFU1YLR073C LDB19Q12502 818 aa8.56□□□□□ -1.04
RFU1YLR073C IOC2Q12072 812 aa8.49□□□□□ -1.05
RFU1YLR073C SPA2P23201 1466 aaKnown RBP8.49□□□□□ -1.05
RFU1YLR073C ULI1P43604 169 aa8.46□□□□□ -1.06
RFU1YLR073C SGS1P35187 1447 aa8.44□□□□□ -1.06
RFU1YLR073C GTT3P39996 337 aa8.43□□□□□ -1.06
RFU1YLR073C SPT6P23615 1451 aaKnown RBP8.4□□□□□ -1.06
RFU1YLR073C ECM5Q03214 1411 aa8.39□□□□□ -1.07
RFU1YLR073C HSL1P34244 1518 aa8.39□□□□□ -1.07
RFU1YLR073C RGA2Q06407 1009 aa8.34□□□□□ -1.07
RFU1YLR073C OXP1P28273 1286 aa8.27□□□□□ -1.09
RFU1YLR073C RQC2Q12532 1038 aaKnown RBP8.27□□□□□ -1.09
RFU1YLR073C RTG1P32607 177 aa8.24□□□□□ -1.09
RFU1YLR073C NCR1Q12200 1170 aa8.24□□□□□ -1.09
RFU1YLR073C BUD4P47136 1447 aa8.23□□□□□ -1.09
RFU1YLR073C BBC1P47068 1157 aa8.22□□□□□ -1.09
RFU1YLR073C HIR3P47171 1648 aa8.21□□□□□ -1.1
RFU1YLR073C THO2P53552 1597 aaKnown RBP8.2□□□□□ -1.1
RFU1YLR073C MSB4Q12317 492 aa8.2□□□□□ -1.1
RFU1YLR073C BCK2P33306 851 aa8.19□□□□□ -1.1
RFU1YLR073C EAP1P36041 632 aaKnown RBP8.19□□□□□ -1.1
RFU1YLR073C TFA1P36100 482 aa8.19□□□□□ -1.1
RFU1YLR073C MDS3P53094 1487 aa8.19□□□□□ -1.1
RFU1YLR073C PTP3P40048 928 aa8.18□□□□□ -1.1
RFU1YLR073C SEC61P32915 480 aa8.12□□□□□ -1.11
RFU1YLR073C YIL055CP40523 627 aaKnown RBP8.12□□□□□ -1.11
RFU1YLR073C PIB1Q06651 286 aa8.12□□□□□ -1.11
RFU1YLR073C REV3P14284 1504 aa8.12□□□□□ -1.11
RFU1YLR073C TRP5P00931 707 aaKnown RBP8.11□□□□□ -1.11
RFU1YLR073C AI2P03876 854 aa8.1□□□□□ -1.11
RFU1YLR073C YNL035CP53962 389 aaKnown RBP8.09□□□□□ -1.11
RFU1YLR073C PEP1P32319 1579 aa8.06□□□□□ -1.12
RFU1YLR073C RSM7P47150 247 aa8.03□□□□□ -1.12
RFU1YLR073C YOL036WQ08206 761 aa8.03□□□□□ -1.12
RFU1YLR073C CHL1P22516 861 aaPredicted RBP8.02□□□□□ -1.13
RFU1YLR073C SET4P42948 560 aa8.02□□□□□ -1.13
RFU1YLR073C XRN1P22147 1528 aaKnown RBP8.02□□□□□ -1.13
RFU1YLR073C BPT1P14772 1559 aa8.01□□□□□ -1.13
RFU1YLR073C BFR2Q06631 534 aaKnown RBP8.01□□□□□ -1.13
RFU1YLR073C SAP30P38429 201 aa7.98□□□□□ -1.13
RFU1YLR073C TFG1P41895 735 aaPredicted RBP7.98□□□□□ -1.13
RFU1YLR073C RGA1P39083 1007 aa7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms