RNA–Protein interactions for RNA: YLR011W

LOT6, Transcript of FMN-dependent NAD(P)H:quinone reductase, yeastyeast

Gene LOT6, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOT6YLR011W SGS1P35187 1447 aa11.69□□□□□ -0.54
LOT6YLR011W MTC1P47018 478 aaKnown RBP11.54□□□□□ -0.56
LOT6YLR011W SPA2P23201 1466 aaKnown RBP11.42□□□□□ -0.58
LOT6YLR011W SSN2P38931 1420 aa11.33□□□□□ -0.6
LOT6YLR011W INO80P53115 1489 aa11.26□□□□□ -0.61
LOT6YLR011W DRS1P32892 752 aaKnown RBP11.09□□□□□ -0.63
LOT6YLR011W TCB3Q03640 1545 aaKnown RBP10.97□□□□□ -0.65
LOT6YLR011W FAP1P53971 965 aa10.93□□□□□ -0.66
LOT6YLR011W TY1B-DR4Q07793 1604 aa10.74□□□□□ -0.69
LOT6YLR011W HSL1P34244 1518 aa10.67□□□□□ -0.7
LOT6YLR011W SPT6P23615 1451 aaKnown RBP10.65□□□□□ -0.7
LOT6YLR011W SKI3P17883 1432 aaKnown RBP10.58□□□□□ -0.72
LOT6YLR011W XRN1P22147 1528 aaKnown RBP10.54□□□□□ -0.72
LOT6YLR011W HIR3P47171 1648 aa10.51□□□□□ -0.73
LOT6YLR011W REV3P14284 1504 aa10.39□□□□□ -0.75
LOT6YLR011W CHD1P32657 1468 aa10.36□□□□□ -0.75
LOT6YLR011W SWR1Q05471 1514 aa10.36□□□□□ -0.75
LOT6YLR011W MMS22Q06164 1454 aa10.36□□□□□ -0.75
LOT6YLR011W TAF2P23255 1407 aa10.34□□□□□ -0.75
LOT6YLR011W THO2P53552 1597 aaKnown RBP10.34□□□□□ -0.75
LOT6YLR011W MON2P48563 1636 aaPredicted RBP10.33□□□□□ -0.76
LOT6YLR011W SIN3P22579 1536 aa10.3□□□□□ -0.76
LOT6YLR011W PRY3P47033 881 aa10.29□□□□□ -0.76
LOT6YLR011W SSK2P53599 1579 aa10.27□□□□□ -0.76
LOT6YLR011W MYO2P19524 1574 aaKnown RBP10.18□□□□□ -0.78
LOT6YLR011W SAS10Q12136 610 aaPredicted RBP10.17□□□□□ -0.78
LOT6YLR011W ESP1Q03018 1630 aa10.17□□□□□ -0.78
LOT6YLR011W YTA7P40340 1379 aa10.15□□□□□ -0.78
LOT6YLR011W STU1P38198 1513 aa10.14□□□□□ -0.79
LOT6YLR011W POL1P13382 1468 aa10.13□□□□□ -0.79
LOT6YLR011W RSE1Q04693 1361 aaKnown RBP10.11□□□□□ -0.79
LOT6YLR011W AAD16Q02895 342 aa10.05□□□□□ -0.8
LOT6YLR011W BUD4P47136 1447 aa10.05□□□□□ -0.8
LOT6YLR011W UFD4P33202 1483 aa10.04□□□□□ -0.8
LOT6YLR011W PRI1P10363 409 aa10.03□□□□□ -0.8
LOT6YLR011W BPT1P14772 1559 aa10.03□□□□□ -0.8
LOT6YLR011W YPK9Q12697 1472 aa10.03□□□□□ -0.8
LOT6YLR011W TRM732Q03496 1420 aa10.02□□□□□ -0.81
LOT6YLR011W IKI3Q06706 1349 aaKnown RBP10.01□□□□□ -0.81
LOT6YLR011W ECM5Q03214 1411 aa9.98□□□□□ -0.81
LOT6YLR011W DNA2P38859 1522 aa9.97□□□□□ -0.81
LOT6YLR011W ATG2P53855 1592 aa9.97□□□□□ -0.81
LOT6YLR011W NSR1P27476 414 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
LOT6YLR011W TAF7Q05021 590 aa9.96□□□□□ -0.82
LOT6YLR011W YOR1P53049 1477 aa9.96□□□□□ -0.82
LOT6YLR011W SCC2Q04002 1493 aa9.96□□□□□ -0.82
LOT6YLR011W RKR1Q04781 1562 aa9.95□□□□□ -0.82
LOT6YLR011W MYO4P32492 1471 aa9.93□□□□□ -0.82
LOT6YLR011W NOP2P40991 618 aaKnown RBP9.92□□□□□ -0.82
LOT6YLR011W KOG1P38873 1557 aa9.9□□□□□ -0.82
LOT6YLR011W STH1P32597 1359 aa9.88□□□□□ -0.83
LOT6YLR011W SPP41P38904 1435 aa9.87□□□□□ -0.83
LOT6YLR011W SMC4Q12267 1418 aa9.86□□□□□ -0.83
LOT6YLR011W RPO31P04051 1460 aa9.85□□□□□ -0.83
LOT6YLR011W SSM4P40318 1319 aa9.85□□□□□ -0.83
LOT6YLR011W TOP2P06786 1428 aaKnown RBP9.85□□□□□ -0.83
LOT6YLR011W SNQ2P32568 1501 aaKnown RBP9.84□□□□□ -0.83
LOT6YLR011W IFH1P39520 1085 aa9.83□□□□□ -0.84
LOT6YLR011W PEP1P32319 1579 aa9.81□□□□□ -0.84
LOT6YLR011W MDS3P53094 1487 aa9.78□□□□□ -0.84
LOT6YLR011W NUP170P38181 1502 aa9.77□□□□□ -0.84
LOT6YLR011W YCF1P39109 1515 aaKnown RBP9.77□□□□□ -0.85
LOT6YLR011W GEA1P47102 1408 aaPredicted RBP9.74□□□□□ -0.85
LOT6YLR011W POL5P39985 1022 aaKnown RBP9.74□□□□□ -0.85
LOT6YLR011W YCK3P39962 524 aa9.73□□□□□ -0.85
LOT6YLR011W PAN1P32521 1480 aa9.71□□□□□ -0.86
LOT6YLR011W PDR15Q04182 1529 aaKnown RBP9.7□□□□□ -0.86
LOT6YLR011W MLP2P40457 1679 aa9.7□□□□□ -0.86
LOT6YLR011W ENP1P38333 483 aaKnown RBP9.69□□□□□ -0.86
LOT6YLR011W TSC11P40061 1430 aa9.69□□□□□ -0.86
LOT6YLR011W ISW2Q08773 1120 aa9.69□□□□□ -0.86
LOT6YLR011W HAA1Q12753 694 aaKnown RBP9.69□□□□□ -0.86
LOT6YLR011W RTT106P40161 455 aa9.68□□□□□ -0.86
LOT6YLR011W TY2B-LR1P0C2J3 1770 aa9.66□□□□□ -0.86
LOT6YLR011W TY2B-FP0CX63 1770 aa9.66□□□□□ -0.86
LOT6YLR011W TY2B-GR2P0CX64 1770 aa9.66□□□□□ -0.86
LOT6YLR011W TY2B-CP25384 1770 aa9.66□□□□□ -0.86
LOT6YLR011W TY2B-DR2Q03494 1770 aa9.66□□□□□ -0.86
LOT6YLR011W TY1B-DR1Q03855 1755 aa9.66□□□□□ -0.86
LOT6YLR011W TY2B-DR3Q07791 1770 aaKnown RBP9.66□□□□□ -0.86
LOT6YLR011W TY2B-OR1Q12113 1770 aa9.66□□□□□ -0.86
LOT6YLR011W TY2B-DR1Q12472 1770 aa9.66□□□□□ -0.86
LOT6YLR011W TY2B-OR2Q12501 1770 aa9.66□□□□□ -0.86
LOT6YLR011W TY1B-DR3Q99231 1755 aa9.66□□□□□ -0.86
LOT6YLR011W RQC2Q12532 1038 aaKnown RBP9.63□□□□□ -0.87
LOT6YLR011W ULS1Q08562 1619 aa9.6□□□□□ -0.87
LOT6YLR011W TY2B-BQ12491 1770 aa9.6□□□□□ -0.87
LOT6YLR011W RPG1P38249 964 aaKnown RBP9.59□□□□□ -0.87
LOT6YLR011W SEC3P33332 1336 aaKnown RBP9.56□□□□□ -0.88
LOT6YLR011W SPT7P35177 1332 aa9.56□□□□□ -0.88
LOT6YLR011W VPS15P22219 1454 aa9.55□□□□□ -0.88
LOT6YLR011W TY3B-GQ99315 1547 aa9.54□□□□□ -0.88
LOT6YLR011W VTH1P40438 1549 aa9.52□□□□□ -0.88
LOT6YLR011W VTH2P40890 1549 aa9.52□□□□□ -0.88
LOT6YLR011W SNT2P53127 1403 aa9.52□□□□□ -0.89
LOT6YLR011W TY1B-HO13535 1793 aa9.5□□□□□ -0.89
LOT6YLR011W TY1B-DR5P0C2I2 1755 aa9.5□□□□□ -0.89
LOT6YLR011W TY1B-DR6P0C2I3 1755 aa9.5□□□□□ -0.89
LOT6YLR011W TY1B-LR2P0C2I5 1755 aa9.5□□□□□ -0.89
LOT6YLR011W TY1B-LR3P0C2I6 1755 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms