RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeastyeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOX2YKR009C MON2P48563 1636 aaPredicted RBP9.24□□□□□ -0.93
FOX2YKR009C INO80P53115 1489 aa9.06□□□□□ -0.96
FOX2YKR009C TY1B-DR4Q07793 1604 aa8.81□□□□□ -1
FOX2YKR009C TCB3Q03640 1545 aaKnown RBP8.79□□□□□ -1
FOX2YKR009C SWR1Q05471 1514 aa8.79□□□□□ -1
FOX2YKR009C DNA2P38859 1522 aa8.7□□□□□ -1.02
FOX2YKR009C KOG1P38873 1557 aa8.63□□□□□ -1.03
FOX2YKR009C SGS1P35187 1447 aa8.62□□□□□ -1.03
FOX2YKR009C HSL1P34244 1518 aa8.45□□□□□ -1.06
FOX2YKR009C SPT6P23615 1451 aaKnown RBP8.4□□□□□ -1.07
FOX2YKR009C HIR3P47171 1648 aa8.26□□□□□ -1.09
FOX2YKR009C SPA2P23201 1466 aaKnown RBP8.24□□□□□ -1.09
FOX2YKR009C THO2P53552 1597 aaKnown RBP8.23□□□□□ -1.09
FOX2YKR009C RSE1Q04693 1361 aaKnown RBP8.2□□□□□ -1.1
FOX2YKR009C BUD4P47136 1447 aa8.13□□□□□ -1.11
FOX2YKR009C ECM5Q03214 1411 aa8.13□□□□□ -1.11
FOX2YKR009C MDS3P53094 1487 aa8.07□□□□□ -1.12
FOX2YKR009C PEP1P32319 1579 aa8.06□□□□□ -1.12
FOX2YKR009C XRN1P22147 1528 aaKnown RBP8.05□□□□□ -1.12
FOX2YKR009C ATG2P53855 1592 aa8.01□□□□□ -1.13
FOX2YKR009C SSN2P38931 1420 aa7.99□□□□□ -1.13
FOX2YKR009C REV3P14284 1504 aa7.96□□□□□ -1.14
FOX2YKR009C SIN3P22579 1536 aa7.96□□□□□ -1.14
FOX2YKR009C SSK2P53599 1579 aa7.9□□□□□ -1.15
FOX2YKR009C BPT1P14772 1559 aa7.84□□□□□ -1.15
FOX2YKR009C ESP1Q03018 1630 aa7.81□□□□□ -1.16
FOX2YKR009C YCF1P39109 1515 aaKnown RBP7.72□□□□□ -1.17
FOX2YKR009C SKI3P17883 1432 aaKnown RBP7.72□□□□□ -1.17
FOX2YKR009C YPK9Q12697 1472 aa7.7□□□□□ -1.18
FOX2YKR009C TAF2P23255 1407 aa7.69□□□□□ -1.18
FOX2YKR009C MYO2P19524 1574 aaKnown RBP7.69□□□□□ -1.18
FOX2YKR009C MTC1P47018 478 aaKnown RBP7.68□□□□□ -1.18
FOX2YKR009C SCC2Q04002 1493 aa7.67□□□□□ -1.18
FOX2YKR009C RPO31P04051 1460 aa7.65□□□□□ -1.19
FOX2YKR009C UFD4P33202 1483 aa7.64□□□□□ -1.19
FOX2YKR009C TY2B-LR1P0C2J3 1770 aa7.63□□□□□ -1.19
FOX2YKR009C TY2B-FP0CX63 1770 aa7.63□□□□□ -1.19
FOX2YKR009C TY2B-GR2P0CX64 1770 aa7.63□□□□□ -1.19
FOX2YKR009C TY2B-CP25384 1770 aa7.63□□□□□ -1.19
FOX2YKR009C TY2B-DR2Q03494 1770 aa7.63□□□□□ -1.19
FOX2YKR009C TY1B-DR1Q03855 1755 aa7.63□□□□□ -1.19
FOX2YKR009C TY2B-DR3Q07791 1770 aaKnown RBP7.63□□□□□ -1.19
FOX2YKR009C TY2B-OR1Q12113 1770 aa7.63□□□□□ -1.19
FOX2YKR009C TY2B-DR1Q12472 1770 aa7.63□□□□□ -1.19
FOX2YKR009C TY2B-OR2Q12501 1770 aa7.63□□□□□ -1.19
FOX2YKR009C TY1B-BRQ12193 1756 aa7.61□□□□□ -1.19
FOX2YKR009C TY1B-GR3Q12316 1755 aa7.61□□□□□ -1.19
FOX2YKR009C TY1B-ORQ92393 1755 aa7.61□□□□□ -1.19
FOX2YKR009C DRS1P32892 752 aaKnown RBP7.59□□□□□ -1.19
FOX2YKR009C CDC25P04821 1589 aa7.58□□□□□ -1.2
FOX2YKR009C CHD1P32657 1468 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-HO13535 1793 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-DR5P0C2I2 1755 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-DR6P0C2I3 1755 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-LR2P0C2I5 1755 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-LR3P0C2I6 1755 aaKnown RBP7.54□□□□□ -1.2
FOX2YKR009C TY1B-PR1P0C2I9 1755 aaKnown RBP7.54□□□□□ -1.2
FOX2YKR009C TY1B-PR2P0C2J0 1756 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-PR3P0C2J1 1755 aaKnown RBP7.54□□□□□ -1.2
FOX2YKR009C TY1B-JR1P47098 1755 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-ML2Q03434 1755 aaKnown RBP7.54□□□□□ -1.2
FOX2YKR009C TY1B-ER1Q03612 1755 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-ML1Q04711 1755 aaKnown RBP7.54□□□□□ -1.2
FOX2YKR009C TY1B-GR2Q12269 1755 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-OLQ12273 1755 aa7.54□□□□□ -1.2
FOX2YKR009C TY1B-PLQ12414 1755 aaKnown RBP7.54□□□□□ -1.2
FOX2YKR009C TY2B-BQ12491 1770 aa7.54□□□□□ -1.2
FOX2YKR009C ESC1Q03661 1658 aaKnown RBP7.53□□□□□ -1.2
FOX2YKR009C TY1B-DR3Q99231 1755 aa7.53□□□□□ -1.2
FOX2YKR009C MET5P47169 1442 aa7.52□□□□□ -1.21
FOX2YKR009C DNF1P32660 1571 aa7.52□□□□□ -1.21
FOX2YKR009C RPA190P10964 1664 aaKnown RBP7.5□□□□□ -1.21
FOX2YKR009C TOP2P06786 1428 aaKnown RBP7.5□□□□□ -1.21
FOX2YKR009C PAN1P32521 1480 aa7.48□□□□□ -1.21
FOX2YKR009C RKR1Q04781 1562 aa7.47□□□□□ -1.21
FOX2YKR009C POL1P13382 1468 aa7.46□□□□□ -1.21
FOX2YKR009C LTE1P07866 1435 aa7.41□□□□□ -1.22
FOX2YKR009C MMS22Q06164 1454 aa7.41□□□□□ -1.22
FOX2YKR009C SMC4Q12267 1418 aa7.4□□□□□ -1.23
FOX2YKR009C YOR1P53049 1477 aa7.39□□□□□ -1.23
FOX2YKR009C BNI1P41832 1953 aa7.38□□□□□ -1.23
FOX2YKR009C TY1B-JR2P47100 1755 aaKnown RBP7.38□□□□□ -1.23
FOX2YKR009C TY1B-ER2Q03619 1755 aa7.38□□□□□ -1.23
FOX2YKR009C TY1B-MR1Q04214 1755 aa7.38□□□□□ -1.23
FOX2YKR009C TY1B-MR2Q04670 1755 aaKnown RBP7.38□□□□□ -1.23
FOX2YKR009C TY1B-LR1Q12088 1755 aaKnown RBP7.38□□□□□ -1.23
FOX2YKR009C TY1B-NL1Q12112 1755 aa7.38□□□□□ -1.23
FOX2YKR009C TY1B-GR1Q12141 1755 aa7.38□□□□□ -1.23
FOX2YKR009C TY1B-BLQ12490 1755 aa7.38□□□□□ -1.23
FOX2YKR009C YRF1-1P0CX20 1796 aa7.35□□□□□ -1.23
FOX2YKR009C YRF1-5P0CX21 1796 aa7.35□□□□□ -1.23
FOX2YKR009C YRF1-8P0CX22 1796 aa7.35□□□□□ -1.23
FOX2YKR009C NTE1Q04958 1679 aa7.33□□□□□ -1.24
FOX2YKR009C STU1P38198 1513 aa7.32□□□□□ -1.24
FOX2YKR009C RPO21P04050 1733 aaKnown RBP7.31□□□□□ -1.24
FOX2YKR009C SPP41P38904 1435 aa7.31□□□□□ -1.24
FOX2YKR009C TRM732Q03496 1420 aa7.31□□□□□ -1.24
FOX2YKR009C GEA2P39993 1459 aaKnown RBP7.29□□□□□ -1.24
FOX2YKR009C VTH1P40438 1549 aa7.28□□□□□ -1.24
FOX2YKR009C VTH2P40890 1549 aa7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms