RNA–Protein interactions for RNA: YJR072C

NPA3, Transcript of Member of the conserved GPN-loop GTPase family, yeastyeast

Gene NPA3, Length 1,158 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPA3YJR072C FAP1P53971 965 aa13.79□□□□□ -0.2
NPA3YJR072C MTC1P47018 478 aaKnown RBP13.53□□□□□ -0.24
NPA3YJR072C DRS1P32892 752 aaKnown RBP13.51□□□□□ -0.25
NPA3YJR072C PRY3P47033 881 aa13.01□□□□□ -0.33
NPA3YJR072C AAD16Q02895 342 aa12.34□□□□□ -0.43
NPA3YJR072C PRI1P10363 409 aa12.22□□□□□ -0.45
NPA3YJR072C YCK3P39962 524 aa12.2□□□□□ -0.46
NPA3YJR072C HAA1Q12753 694 aaKnown RBP12.17□□□□□ -0.46
NPA3YJR072C BFR2Q06631 534 aaKnown RBP11.77□□□□□ -0.53
NPA3YJR072C ISW2Q08773 1120 aa11.56□□□□□ -0.56
NPA3YJR072C RPG1P38249 964 aaKnown RBP11.45□□□□□ -0.58
NPA3YJR072C TSR3Q12094 313 aaKnown RBP11.44□□□□□ -0.58
NPA3YJR072C DIP2Q12220 943 aaPredicted RBP11.44□□□□□ -0.58
NPA3YJR072C AVT3P36062 692 aa11.25□□□□□ -0.61
NPA3YJR072C TFA1P36100 482 aa11.12□□□□□ -0.63
NPA3YJR072C MRPL32P25348 183 aa11.05□□□□□ -0.64
NPA3YJR072C YGL015CP33199 130 aa11.01□□□□□ -0.65
NPA3YJR072C RSE1Q04693 1361 aaKnown RBP10.77□□□□□ -0.69
NPA3YJR072C BUD31P25337 157 aaPredicted RBP10.72□□□□□ -0.69
NPA3YJR072C SGS1P35187 1447 aa10.4□□□□□ -0.75
NPA3YJR072C RPL17AP05740 184 aaKnown RBP10.34□□□□□ -0.75
NPA3YJR072C RPL17BP46990 184 aaKnown RBP10.34□□□□□ -0.75
NPA3YJR072C INO80P53115 1489 aa10.26□□□□□ -0.77
NPA3YJR072C REB1P21538 810 aa10.26□□□□□ -0.77
NPA3YJR072C MON2P48563 1636 aaPredicted RBP10.24□□□□□ -0.77
NPA3YJR072C CDC27P38042 758 aa10.19□□□□□ -0.78
NPA3YJR072C UBP10P53874 792 aaPredicted RBP10.15□□□□□ -0.78
NPA3YJR072C TCB3Q03640 1545 aaKnown RBP10.12□□□□□ -0.79
NPA3YJR072C SIS1P25294 352 aaKnown RBP10.06□□□□□ -0.8
NPA3YJR072C MAP2P38174 421 aaKnown RBP10.05□□□□□ -0.8
NPA3YJR072C TY1B-DR4Q07793 1604 aa10.01□□□□□ -0.81
NPA3YJR072C SPA2P23201 1466 aaKnown RBP9.97□□□□□ -0.81
NPA3YJR072C SSN2P38931 1420 aa9.9□□□□□ -0.82
NPA3YJR072C UBP9P39967 754 aa9.89□□□□□ -0.83
NPA3YJR072C SPT21P35209 758 aa9.86□□□□□ -0.83
NPA3YJR072C YKR023WP36119 530 aaKnown RBP9.83□□□□□ -0.84
NPA3YJR072C RIM101P33400 625 aa9.8□□□□□ -0.84
NPA3YJR072C HSL1P34244 1518 aa9.78□□□□□ -0.84
NPA3YJR072C RQC2Q12532 1038 aaKnown RBP9.78□□□□□ -0.84
NPA3YJR072C SWR1Q05471 1514 aa9.77□□□□□ -0.84
NPA3YJR072C TIF4632P39936 914 aaKnown RBP9.76□□□□□ -0.85
NPA3YJR072C SPT6P23615 1451 aaKnown RBP9.74□□□□□ -0.85
NPA3YJR072C DNA2P38859 1522 aa9.73□□□□□ -0.85
NPA3YJR072C TGL3P40308 642 aa9.73□□□□□ -0.85
NPA3YJR072C PTP3P40048 928 aa9.67□□□□□ -0.86
NPA3YJR072C TFC8Q12308 588 aa9.64□□□□□ -0.87
NPA3YJR072C HOP09932 586 aa9.61□□□□□ -0.87
NPA3YJR072C HIR3P47171 1648 aa9.6□□□□□ -0.87
NPA3YJR072C DCD1P06773 312 aa9.6□□□□□ -0.87
NPA3YJR072C SCY1P53009 804 aa9.6□□□□□ -0.87
NPA3YJR072C SLX5P32828 619 aaKnown RBP9.59□□□□□ -0.87
NPA3YJR072C KOG1P38873 1557 aa9.57□□□□□ -0.88
NPA3YJR072C XRN1P22147 1528 aaKnown RBP9.51□□□□□ -0.89
NPA3YJR072C YIL055CP40523 627 aaKnown RBP9.51□□□□□ -0.89
NPA3YJR072C SSP1P38871 571 aa9.5□□□□□ -0.89
NPA3YJR072C YAH1Q12184 172 aaKnown RBP9.49□□□□□ -0.89
NPA3YJR072C OXP1P28273 1286 aa9.48□□□□□ -0.89
NPA3YJR072C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.4□□□□□ -0.9 RIP-Chip
NPA3YJR072C REV3P14284 1504 aa9.4□□□□□ -0.91
NPA3YJR072C SIN3P22579 1536 aa9.37□□□□□ -0.91
NPA3YJR072C THO2P53552 1597 aaKnown RBP9.34□□□□□ -0.91
NPA3YJR072C SSK2P53599 1579 aa9.29□□□□□ -0.92
NPA3YJR072C YLR271WQ06152 274 aa9.29□□□□□ -0.92
NPA3YJR072C BUD4P47136 1447 aa9.29□□□□□ -0.92
NPA3YJR072C RSM7P47150 247 aa9.28□□□□□ -0.92
NPA3YJR072C DMA1P38823 416 aa9.27□□□□□ -0.93
NPA3YJR072C BCH2P36122 765 aa9.26□□□□□ -0.93
NPA3YJR072C ECM5Q03214 1411 aa9.24□□□□□ -0.93
NPA3YJR072C ESP1Q03018 1630 aa9.22□□□□□ -0.93
NPA3YJR072C TAF2P23255 1407 aa9.2□□□□□ -0.94
NPA3YJR072C ATG2P53855 1592 aa9.2□□□□□ -0.94
NPA3YJR072C YBL029C-AQ3E756 94 aa9.19□□□□□ -0.94
NPA3YJR072C MYO2P19524 1574 aaKnown RBP9.18□□□□□ -0.94
NPA3YJR072C MST1P07236 462 aa9.15□□□□□ -0.94
NPA3YJR072C MGA2P40578 1113 aa9.15□□□□□ -0.94
NPA3YJR072C PEP1P32319 1579 aa9.14□□□□□ -0.95
NPA3YJR072C MDS3P53094 1487 aa9.12□□□□□ -0.95
NPA3YJR072C AI2P03876 854 aa9.11□□□□□ -0.95
NPA3YJR072C BBC1P47068 1157 aa9.1□□□□□ -0.95
NPA3YJR072C SKI3P17883 1432 aaKnown RBP9.09□□□□□ -0.95
NPA3YJR072C YPK9Q12697 1472 aa9.08□□□□□ -0.96
NPA3YJR072C VNX1P42839 908 aa9.05□□□□□ -0.96
NPA3YJR072C YOR238WQ08634 303 aa9.05□□□□□ -0.96
NPA3YJR072C POL1P13382 1468 aa9.03□□□□□ -0.96
NPA3YJR072C CST9Q06032 482 aa9.01□□□□□ -0.97
NPA3YJR072C PSD2P53037 1138 aaKnown RBP9□□□□□ -0.97
NPA3YJR072C SCC2Q04002 1493 aa8.99□□□□□ -0.97
NPA3YJR072C EPS1P40557 701 aa8.98□□□□□ -0.97
NPA3YJR072C SPP1Q03012 353 aa8.97□□□□□ -0.97
NPA3YJR072C RPO31P04051 1460 aa8.96□□□□□ -0.97
NPA3YJR072C CHD1P32657 1468 aa8.96□□□□□ -0.97
NPA3YJR072C YJL171CP46992 396 aa8.96□□□□□ -0.98
NPA3YJR072C STU1P38198 1513 aa8.95□□□□□ -0.98
NPA3YJR072C BDF1P35817 686 aa8.94□□□□□ -0.98
NPA3YJR072C AIR2Q12476 344 aaKnown RBP8.94□□□□□ -0.98
NPA3YJR072C RKR1Q04781 1562 aa8.92□□□□□ -0.98
NPA3YJR072C UFD4P33202 1483 aa8.9□□□□□ -0.98
NPA3YJR072C YTA7P40340 1379 aa8.9□□□□□ -0.98
NPA3YJR072C YOR1P53049 1477 aa8.89□□□□□ -0.99
NPA3YJR072C TOP2P06786 1428 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms