RNA–Protein interactions for RNA: YHR115C

DMA1, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene DMA1, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DMA1YHR115C MTC1P47018 478 aaKnown RBP13.83□□□□□ -0.2
DMA1YHR115C FAP1P53971 965 aa13.43□□□□□ -0.26
DMA1YHR115C PRY3P47033 881 aa12.65□□□□□ -0.38
DMA1YHR115C DRS1P32892 752 aaKnown RBP12.28□□□□□ -0.44
DMA1YHR115C AAD16Q02895 342 aa12.11□□□□□ -0.47
DMA1YHR115C PRI1P10363 409 aa12.01□□□□□ -0.49
DMA1YHR115C HAA1Q12753 694 aaKnown RBP11.91□□□□□ -0.5
DMA1YHR115C YCK3P39962 524 aa11.86□□□□□ -0.51
DMA1YHR115C ISW2Q08773 1120 aa11.55□□□□□ -0.56
DMA1YHR115C RPG1P38249 964 aaKnown RBP11.43□□□□□ -0.58
DMA1YHR115C TSR3Q12094 313 aaKnown RBP11.24□□□□□ -0.61
DMA1YHR115C DIP2Q12220 943 aaPredicted RBP10.99□□□□□ -0.65
DMA1YHR115C MRPL32P25348 183 aa10.88□□□□□ -0.67
DMA1YHR115C YGL015CP33199 130 aa10.83□□□□□ -0.68
DMA1YHR115C RSE1Q04693 1361 aaKnown RBP10.79□□□□□ -0.68
DMA1YHR115C SGS1P35187 1447 aa10.5□□□□□ -0.73
DMA1YHR115C AVT3P36062 692 aa10.49□□□□□ -0.73
DMA1YHR115C RPL17AP05740 184 aaKnown RBP10.47□□□□□ -0.73
DMA1YHR115C RPL17BP46990 184 aaKnown RBP10.47□□□□□ -0.73
DMA1YHR115C REB1P21538 810 aa10.45□□□□□ -0.74
DMA1YHR115C BUD31P25337 157 aaPredicted RBP10.43□□□□□ -0.74
DMA1YHR115C INO80P53115 1489 aa10.23□□□□□ -0.77
DMA1YHR115C SPA2P23201 1466 aaKnown RBP10.21□□□□□ -0.78
DMA1YHR115C CDC27P38042 758 aa10.2□□□□□ -0.78
DMA1YHR115C SSN2P38931 1420 aa10.13□□□□□ -0.79
DMA1YHR115C SPT21P35209 758 aa10.06□□□□□ -0.8
DMA1YHR115C YKR023WP36119 530 aaKnown RBP10.05□□□□□ -0.8
DMA1YHR115C UBP10P53874 792 aaPredicted RBP10.02□□□□□ -0.81
DMA1YHR115C TCB3Q03640 1545 aaKnown RBP10.02□□□□□ -0.81
DMA1YHR115C MAP2P38174 421 aaKnown RBP9.94□□□□□ -0.82
DMA1YHR115C BFR2Q06631 534 aaKnown RBP9.92□□□□□ -0.82
DMA1YHR115C TFC8Q12308 588 aa9.84□□□□□ -0.83
DMA1YHR115C SIS1P25294 352 aaKnown RBP9.8□□□□□ -0.84
DMA1YHR115C TY1B-DR4Q07793 1604 aa9.79□□□□□ -0.84
DMA1YHR115C HOP09932 586 aa9.78□□□□□ -0.84
DMA1YHR115C DCD1P06773 312 aa9.75□□□□□ -0.85
DMA1YHR115C UBP9P39967 754 aa9.73□□□□□ -0.85
DMA1YHR115C SPT6P23615 1451 aaKnown RBP9.71□□□□□ -0.86
DMA1YHR115C HSL1P34244 1518 aa9.7□□□□□ -0.86
DMA1YHR115C TIF4632P39936 914 aaKnown RBP9.64□□□□□ -0.87
DMA1YHR115C TGL3P40308 642 aa9.62□□□□□ -0.87
DMA1YHR115C SCY1P53009 804 aa9.61□□□□□ -0.87
DMA1YHR115C RIM101P33400 625 aa9.57□□□□□ -0.88
DMA1YHR115C MON2P48563 1636 aaPredicted RBP9.56□□□□□ -0.88
DMA1YHR115C XRN1P22147 1528 aaKnown RBP9.56□□□□□ -0.88
DMA1YHR115C HIR3P47171 1648 aa9.55□□□□□ -0.88
DMA1YHR115C SLX5P32828 619 aaKnown RBP9.54□□□□□ -0.88
DMA1YHR115C SWR1Q05471 1514 aa9.51□□□□□ -0.89
DMA1YHR115C BCH2P36122 765 aa9.48□□□□□ -0.89
DMA1YHR115C REV3P14284 1504 aa9.42□□□□□ -0.9
DMA1YHR115C THO2P53552 1597 aaKnown RBP9.41□□□□□ -0.9
DMA1YHR115C TAF2P23255 1407 aa9.37□□□□□ -0.91
DMA1YHR115C SKI3P17883 1432 aaKnown RBP9.34□□□□□ -0.91
DMA1YHR115C SIN3P22579 1536 aa9.34□□□□□ -0.91
DMA1YHR115C SSK2P53599 1579 aa9.31□□□□□ -0.92
DMA1YHR115C MYO2P19524 1574 aaKnown RBP9.27□□□□□ -0.93
DMA1YHR115C MMS22Q06164 1454 aa9.22□□□□□ -0.93
DMA1YHR115C ESP1Q03018 1630 aa9.22□□□□□ -0.93
DMA1YHR115C CHD1P32657 1468 aa9.21□□□□□ -0.93
DMA1YHR115C OXP1P28273 1286 aa9.21□□□□□ -0.94
DMA1YHR115C EPS1P40557 701 aa9.2□□□□□ -0.94
DMA1YHR115C BDF1P35817 686 aa9.19□□□□□ -0.94
DMA1YHR115C KOG1P38873 1557 aa9.18□□□□□ -0.94
DMA1YHR115C BUD4P47136 1447 aa9.18□□□□□ -0.94
DMA1YHR115C MST1P07236 462 aa9.15□□□□□ -0.94
DMA1YHR115C DNA2P38859 1522 aa9.15□□□□□ -0.95
DMA1YHR115C YTA7P40340 1379 aa9.13□□□□□ -0.95
DMA1YHR115C STU1P38198 1513 aa9.13□□□□□ -0.95
DMA1YHR115C POL1P13382 1468 aa9.13□□□□□ -0.95
DMA1YHR115C SAS10Q12136 610 aaPredicted RBP9.12□□□□□ -0.95
DMA1YHR115C ECM5Q03214 1411 aa9.1□□□□□ -0.95
DMA1YHR115C YPK9Q12697 1472 aa9.08□□□□□ -0.96
DMA1YHR115C ATG2P53855 1592 aa9.07□□□□□ -0.96
DMA1YHR115C NSR1P27476 414 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
DMA1YHR115C PTP3P40048 928 aa9.02□□□□□ -0.97
DMA1YHR115C YOR238WQ08634 303 aa9.02□□□□□ -0.97
DMA1YHR115C RKR1Q04781 1562 aa9.02□□□□□ -0.97
DMA1YHR115C YBL029C-AQ3E756 94 aa9.01□□□□□ -0.97
DMA1YHR115C BPT1P14772 1559 aa9□□□□□ -0.97
DMA1YHR115C YIL055CP40523 627 aaKnown RBP9□□□□□ -0.97
DMA1YHR115C YOR1P53049 1477 aa8.98□□□□□ -0.97
DMA1YHR115C TAF7Q05021 590 aa8.98□□□□□ -0.97
DMA1YHR115C SCC2Q04002 1493 aa8.97□□□□□ -0.97
DMA1YHR115C MYO4P32492 1471 aa8.96□□□□□ -0.97
DMA1YHR115C MDS3P53094 1487 aa8.96□□□□□ -0.97
DMA1YHR115C RSM7P47150 247 aa8.93□□□□□ -0.98
DMA1YHR115C PEP1P32319 1579 aa8.93□□□□□ -0.98
DMA1YHR115C TOP2P06786 1428 aaKnown RBP8.92□□□□□ -0.98
DMA1YHR115C SMC4Q12267 1418 aa8.92□□□□□ -0.98
DMA1YHR115C VNX1P42839 908 aa8.92□□□□□ -0.98
DMA1YHR115C RPO31P04051 1460 aa8.91□□□□□ -0.98
DMA1YHR115C BBC1P47068 1157 aa8.91□□□□□ -0.98
DMA1YHR115C UFD4P33202 1483 aa8.89□□□□□ -0.99
DMA1YHR115C STH1P32597 1359 aa8.89□□□□□ -0.99
DMA1YHR115C IKI3Q06706 1349 aaKnown RBP8.89□□□□□ -0.99
DMA1YHR115C TRM732Q03496 1420 aa8.88□□□□□ -0.99
DMA1YHR115C AI2P03876 854 aa8.88□□□□□ -0.99
DMA1YHR115C YAP5P40574 245 aa8.88□□□□□ -0.99
DMA1YHR115C YCF1P39109 1515 aaKnown RBP8.85□□□□□ -0.99
DMA1YHR115C SNQ2P32568 1501 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms