RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C SGS1P35187 1447 aa5.6□□□□□ -1.51
NMD2YHR077C INO80P53115 1489 aa5.5□□□□□ -1.53
NMD2YHR077C TY1B-DR4Q07793 1604 aa5.5□□□□□ -1.53
NMD2YHR077C SPA2P23201 1466 aaKnown RBP5.46□□□□□ -1.54
NMD2YHR077C TCB3Q03640 1545 aaKnown RBP5.42□□□□□ -1.54
NMD2YHR077C SSN2P38931 1420 aa5.42□□□□□ -1.54
NMD2YHR077C MON2P48563 1636 aaPredicted RBP5.38□□□□□ -1.55
NMD2YHR077C HSL1P34244 1518 aa5.32□□□□□ -1.56
NMD2YHR077C SWR1Q05471 1514 aa5.27□□□□□ -1.57
NMD2YHR077C SPT6P23615 1451 aaKnown RBP5.24□□□□□ -1.57
NMD2YHR077C HIR3P47171 1648 aa5.23□□□□□ -1.57
NMD2YHR077C XRN1P22147 1528 aaKnown RBP5.13□□□□□ -1.59
NMD2YHR077C SIN3P22579 1536 aa5.13□□□□□ -1.59
NMD2YHR077C REV3P14284 1504 aa5.11□□□□□ -1.59
NMD2YHR077C SSK2P53599 1579 aa5.09□□□□□ -1.59
NMD2YHR077C DRS1P32892 752 aaKnown RBP5.08□□□□□ -1.6
NMD2YHR077C THO2P53552 1597 aaKnown RBP5.07□□□□□ -1.6
NMD2YHR077C ESP1Q03018 1630 aa5.05□□□□□ -1.6
NMD2YHR077C DNA2P38859 1522 aa5.05□□□□□ -1.6
NMD2YHR077C ATG2P53855 1592 aa5.04□□□□□ -1.6
NMD2YHR077C PEP1P32319 1579 aa5□□□□□ -1.61
NMD2YHR077C KOG1P38873 1557 aa5□□□□□ -1.61
NMD2YHR077C MYO2P19524 1574 aaKnown RBP4.95□□□□□ -1.62
NMD2YHR077C BUD4P47136 1447 aa4.93□□□□□ -1.62
NMD2YHR077C CHD1P32657 1468 aa4.92□□□□□ -1.62
NMD2YHR077C TY2B-LR1P0C2J3 1770 aa4.92□□□□□ -1.62
NMD2YHR077C TY2B-FP0CX63 1770 aa4.92□□□□□ -1.62
NMD2YHR077C TY2B-GR2P0CX64 1770 aa4.92□□□□□ -1.62
NMD2YHR077C TY2B-CP25384 1770 aa4.92□□□□□ -1.62
NMD2YHR077C TY2B-DR2Q03494 1770 aa4.92□□□□□ -1.62
NMD2YHR077C TY1B-DR1Q03855 1755 aa4.92□□□□□ -1.62
NMD2YHR077C TY2B-DR3Q07791 1770 aaKnown RBP4.92□□□□□ -1.62
NMD2YHR077C TY2B-OR1Q12113 1770 aa4.92□□□□□ -1.62
NMD2YHR077C TY2B-DR1Q12472 1770 aa4.92□□□□□ -1.62
NMD2YHR077C TY2B-OR2Q12501 1770 aa4.92□□□□□ -1.62
NMD2YHR077C YPK9Q12697 1472 aa4.92□□□□□ -1.62
NMD2YHR077C TAF2P23255 1407 aa4.91□□□□□ -1.62
NMD2YHR077C TY1B-DR3Q99231 1755 aa4.91□□□□□ -1.62
NMD2YHR077C POL1P13382 1468 aa4.91□□□□□ -1.62
NMD2YHR077C ECM5Q03214 1411 aa4.89□□□□□ -1.63
NMD2YHR077C MDS3P53094 1487 aa4.89□□□□□ -1.63
NMD2YHR077C SCC2Q04002 1493 aa4.88□□□□□ -1.63
NMD2YHR077C TY2B-BQ12491 1770 aa4.88□□□□□ -1.63
NMD2YHR077C STU1P38198 1513 aa4.88□□□□□ -1.63
NMD2YHR077C BPT1P14772 1559 aa4.86□□□□□ -1.63
NMD2YHR077C MMS22Q06164 1454 aa4.86□□□□□ -1.63
NMD2YHR077C RPO31P04051 1460 aa4.85□□□□□ -1.63
NMD2YHR077C TY1B-BRQ12193 1756 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-GR3Q12316 1755 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-ORQ92393 1755 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-HO13535 1793 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-DR5P0C2I2 1755 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-DR6P0C2I3 1755 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-LR2P0C2I5 1755 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-LR3P0C2I6 1755 aaKnown RBP4.84□□□□□ -1.63
NMD2YHR077C TY1B-PR1P0C2I9 1755 aaKnown RBP4.84□□□□□ -1.63
NMD2YHR077C TY1B-PR2P0C2J0 1756 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-PR3P0C2J1 1755 aaKnown RBP4.84□□□□□ -1.63
NMD2YHR077C TY1B-JR1P47098 1755 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-ML2Q03434 1755 aaKnown RBP4.84□□□□□ -1.63
NMD2YHR077C TY1B-ER1Q03612 1755 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-ML1Q04711 1755 aaKnown RBP4.84□□□□□ -1.63
NMD2YHR077C TY1B-GR2Q12269 1755 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-OLQ12273 1755 aa4.84□□□□□ -1.63
NMD2YHR077C TY1B-PLQ12414 1755 aaKnown RBP4.84□□□□□ -1.63
NMD2YHR077C RKR1Q04781 1562 aa4.84□□□□□ -1.64
NMD2YHR077C YCF1P39109 1515 aaKnown RBP4.83□□□□□ -1.64
NMD2YHR077C YOR1P53049 1477 aa4.83□□□□□ -1.64
NMD2YHR077C SKI3P17883 1432 aaKnown RBP4.82□□□□□ -1.64
NMD2YHR077C TOP2P06786 1428 aaKnown RBP4.77□□□□□ -1.65
NMD2YHR077C MYO4P32492 1471 aa4.76□□□□□ -1.65
NMD2YHR077C UFD4P33202 1483 aa4.76□□□□□ -1.65
NMD2YHR077C SMC4Q12267 1418 aa4.76□□□□□ -1.65
NMD2YHR077C TY1B-JR2P47100 1755 aaKnown RBP4.75□□□□□ -1.65
NMD2YHR077C TY1B-ER2Q03619 1755 aa4.75□□□□□ -1.65
NMD2YHR077C TY1B-MR1Q04214 1755 aa4.75□□□□□ -1.65
NMD2YHR077C TY1B-MR2Q04670 1755 aaKnown RBP4.75□□□□□ -1.65
NMD2YHR077C TY1B-LR1Q12088 1755 aaKnown RBP4.75□□□□□ -1.65
NMD2YHR077C TY1B-NL1Q12112 1755 aa4.75□□□□□ -1.65
NMD2YHR077C TY1B-GR1Q12141 1755 aa4.75□□□□□ -1.65
NMD2YHR077C TY1B-BLQ12490 1755 aa4.75□□□□□ -1.65
NMD2YHR077C ULS1Q08562 1619 aa4.75□□□□□ -1.65
NMD2YHR077C NUP170P38181 1502 aa4.74□□□□□ -1.65
NMD2YHR077C MLP2P40457 1679 aa4.73□□□□□ -1.65
NMD2YHR077C YTA7P40340 1379 aa4.72□□□□□ -1.65
NMD2YHR077C SNQ2P32568 1501 aaKnown RBP4.71□□□□□ -1.65
NMD2YHR077C ESC1Q03661 1658 aaKnown RBP4.71□□□□□ -1.66
NMD2YHR077C TY3B-GQ99315 1547 aa4.7□□□□□ -1.66
NMD2YHR077C CDC25P04821 1589 aa4.69□□□□□ -1.66
NMD2YHR077C MTC1P47018 478 aaKnown RBP4.69□□□□□ -1.66
NMD2YHR077C TRM732Q03496 1420 aa4.69□□□□□ -1.66
NMD2YHR077C RPA190P10964 1664 aaKnown RBP4.68□□□□□ -1.66
NMD2YHR077C PDR15Q04182 1529 aaKnown RBP4.66□□□□□ -1.66
NMD2YHR077C YBT1P32386 1661 aa4.66□□□□□ -1.66
NMD2YHR077C VTH1P40438 1549 aa4.65□□□□□ -1.67
NMD2YHR077C VTH2P40890 1549 aa4.65□□□□□ -1.67
NMD2YHR077C DNF1P32660 1571 aa4.65□□□□□ -1.67
NMD2YHR077C RPO21P04050 1733 aaKnown RBP4.64□□□□□ -1.67
NMD2YHR077C SNT2P53127 1403 aa4.64□□□□□ -1.67
NMD2YHR077C IRC20Q06554 1556 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms