RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeastyeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID30YGL227W MON2P48563 1636 aaPredicted RBP11.85□□□□□ -0.51
VID30YGL227W INO80P53115 1489 aa11.29□□□□□ -0.6
VID30YGL227W TCB3Q03640 1545 aaKnown RBP11.26□□□□□ -0.61
VID30YGL227W TY1B-DR4Q07793 1604 aa11.19□□□□□ -0.62
VID30YGL227W KOG1P38873 1557 aa11.06□□□□□ -0.64
VID30YGL227W SWR1Q05471 1514 aa11.03□□□□□ -0.64
VID30YGL227W DNA2P38859 1522 aa10.79□□□□□ -0.68
VID30YGL227W THO2P53552 1597 aaKnown RBP10.63□□□□□ -0.71
VID30YGL227W SGS1P35187 1447 aa10.52□□□□□ -0.73
VID30YGL227W HSL1P34244 1518 aa10.5□□□□□ -0.73
VID30YGL227W SPT6P23615 1451 aaKnown RBP10.41□□□□□ -0.74
VID30YGL227W SSK2P53599 1579 aa10.3□□□□□ -0.76
VID30YGL227W HIR3P47171 1648 aa10.25□□□□□ -0.77
VID30YGL227W BUD4P47136 1447 aa10.22□□□□□ -0.77
VID30YGL227W SIN3P22579 1536 aa10.21□□□□□ -0.77
VID30YGL227W PEP1P32319 1579 aa10.19□□□□□ -0.78
VID30YGL227W SPA2P23201 1466 aaKnown RBP10.13□□□□□ -0.79
VID30YGL227W MDS3P53094 1487 aa10.11□□□□□ -0.79
VID30YGL227W RSE1Q04693 1361 aaKnown RBP10.08□□□□□ -0.8
VID30YGL227W REV3P14284 1504 aa10.05□□□□□ -0.8
VID30YGL227W ATG2P53855 1592 aa10.02□□□□□ -0.8
VID30YGL227W ECM5Q03214 1411 aa9.93□□□□□ -0.82
VID30YGL227W BPT1P14772 1559 aa9.85□□□□□ -0.83
VID30YGL227W XRN1P22147 1528 aaKnown RBP9.78□□□□□ -0.84
VID30YGL227W MYO2P19524 1574 aaKnown RBP9.78□□□□□ -0.84
VID30YGL227W YCF1P39109 1515 aaKnown RBP9.76□□□□□ -0.85
VID30YGL227W ESP1Q03018 1630 aa9.75□□□□□ -0.85
VID30YGL227W MET5P47169 1442 aa9.73□□□□□ -0.85
VID30YGL227W YPK9Q12697 1472 aa9.71□□□□□ -0.85
VID30YGL227W SSN2P38931 1420 aa9.7□□□□□ -0.86
VID30YGL227W RPO31P04051 1460 aa9.64□□□□□ -0.87
VID30YGL227W LTE1P07866 1435 aa9.58□□□□□ -0.88
VID30YGL227W ESC1Q03661 1658 aaKnown RBP9.55□□□□□ -0.88
VID30YGL227W SCC2Q04002 1493 aa9.54□□□□□ -0.88
VID30YGL227W CDC25P04821 1589 aa9.54□□□□□ -0.88
VID30YGL227W RKR1Q04781 1562 aa9.52□□□□□ -0.88
VID30YGL227W TY1B-BRQ12193 1756 aa9.51□□□□□ -0.89
VID30YGL227W TY1B-GR3Q12316 1755 aa9.51□□□□□ -0.89
VID30YGL227W TY1B-ORQ92393 1755 aa9.51□□□□□ -0.89
VID30YGL227W TY2B-LR1P0C2J3 1770 aa9.45□□□□□ -0.9
VID30YGL227W TY2B-FP0CX63 1770 aa9.45□□□□□ -0.9
VID30YGL227W TY2B-GR2P0CX64 1770 aa9.45□□□□□ -0.9
VID30YGL227W TY2B-CP25384 1770 aa9.45□□□□□ -0.9
VID30YGL227W TY2B-DR2Q03494 1770 aa9.45□□□□□ -0.9
VID30YGL227W TY1B-DR1Q03855 1755 aa9.45□□□□□ -0.9
VID30YGL227W TY2B-DR3Q07791 1770 aaKnown RBP9.45□□□□□ -0.9
VID30YGL227W TY2B-OR1Q12113 1770 aa9.45□□□□□ -0.9
VID30YGL227W TY2B-DR1Q12472 1770 aa9.45□□□□□ -0.9
VID30YGL227W TY2B-OR2Q12501 1770 aa9.45□□□□□ -0.9
VID30YGL227W RPA190P10964 1664 aaKnown RBP9.44□□□□□ -0.9
VID30YGL227W DNF1P32660 1571 aa9.42□□□□□ -0.9
VID30YGL227W TY1B-HO13535 1793 aa9.41□□□□□ -0.9
VID30YGL227W TY1B-DR5P0C2I2 1755 aa9.41□□□□□ -0.9
VID30YGL227W TY1B-DR6P0C2I3 1755 aa9.41□□□□□ -0.9
VID30YGL227W TY1B-LR2P0C2I5 1755 aa9.41□□□□□ -0.9
VID30YGL227W TY1B-LR3P0C2I6 1755 aaKnown RBP9.41□□□□□ -0.9
VID30YGL227W TY1B-PR1P0C2I9 1755 aaKnown RBP9.41□□□□□ -0.9
VID30YGL227W TY1B-PR2P0C2J0 1756 aa9.41□□□□□ -0.9
VID30YGL227W TY1B-PR3P0C2J1 1755 aaKnown RBP9.41□□□□□ -0.9
VID30YGL227W TY1B-JR1P47098 1755 aa9.41□□□□□ -0.9
VID30YGL227W TY1B-ML2Q03434 1755 aaKnown RBP9.41□□□□□ -0.9
VID30YGL227W TY1B-ER1Q03612 1755 aa9.41□□□□□ -0.9
VID30YGL227W TY1B-ML1Q04711 1755 aaKnown RBP9.41□□□□□ -0.9
VID30YGL227W TY1B-GR2Q12269 1755 aa9.41□□□□□ -0.9
VID30YGL227W TY1B-OLQ12273 1755 aa9.41□□□□□ -0.9
VID30YGL227W TY1B-PLQ12414 1755 aaKnown RBP9.41□□□□□ -0.9
VID30YGL227W CHD1P32657 1468 aa9.4□□□□□ -0.9
VID30YGL227W TAF2P23255 1407 aa9.4□□□□□ -0.91
VID30YGL227W TOP2P06786 1428 aaKnown RBP9.38□□□□□ -0.91
VID30YGL227W PAN1P32521 1480 aa9.38□□□□□ -0.91
VID30YGL227W SMC4Q12267 1418 aa9.36□□□□□ -0.91
VID30YGL227W UFD4P33202 1483 aa9.35□□□□□ -0.91
VID30YGL227W TY2B-BQ12491 1770 aa9.34□□□□□ -0.91
VID30YGL227W POL1P13382 1468 aa9.32□□□□□ -0.92
VID30YGL227W TY1B-DR3Q99231 1755 aa9.31□□□□□ -0.92
VID30YGL227W GEA2P39993 1459 aaKnown RBP9.3□□□□□ -0.92
VID30YGL227W IRC20Q06554 1556 aa9.26□□□□□ -0.93
VID30YGL227W BNI1P41832 1953 aa9.26□□□□□ -0.93
VID30YGL227W SKI3P17883 1432 aaKnown RBP9.25□□□□□ -0.93
VID30YGL227W NTE1Q04958 1679 aa9.25□□□□□ -0.93
VID30YGL227W RPO21P04050 1733 aaKnown RBP9.24□□□□□ -0.93
VID30YGL227W YOR1P53049 1477 aa9.23□□□□□ -0.93
VID30YGL227W SNT2P53127 1403 aa9.23□□□□□ -0.93
VID30YGL227W MMS22Q06164 1454 aa9.22□□□□□ -0.93
VID30YGL227W STU1P38198 1513 aa9.2□□□□□ -0.94
VID30YGL227W TRM3Q07527 1436 aa9.19□□□□□ -0.94
VID30YGL227W MYO4P32492 1471 aa9.19□□□□□ -0.94
VID30YGL227W TY1B-JR2P47100 1755 aaKnown RBP9.17□□□□□ -0.94
VID30YGL227W TY1B-ER2Q03619 1755 aa9.17□□□□□ -0.94
VID30YGL227W TY1B-MR1Q04214 1755 aa9.17□□□□□ -0.94
VID30YGL227W TY1B-MR2Q04670 1755 aaKnown RBP9.17□□□□□ -0.94
VID30YGL227W TY1B-LR1Q12088 1755 aaKnown RBP9.17□□□□□ -0.94
VID30YGL227W TY1B-NL1Q12112 1755 aa9.17□□□□□ -0.94
VID30YGL227W TY1B-GR1Q12141 1755 aa9.17□□□□□ -0.94
VID30YGL227W TY1B-BLQ12490 1755 aa9.17□□□□□ -0.94
VID30YGL227W MIF2P35201 549 aa9.16□□□□□ -0.94
VID30YGL227W HAP1P0CE41 1502 aa9.15□□□□□ -0.94
VID30YGL227W BUD3P25558 1636 aa9.14□□□□□ -0.95
VID30YGL227W MTC1P47018 478 aaKnown RBP9.14□□□□□ -0.95
VID30YGL227W PDR12Q02785 1511 aa9.14□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms