RNA–Protein interactions for RNA: YGL088W

YGL088W, Transcript of Dubious open reading frame, yeastyeast

Gene YGL088W, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGL088WYGL088W INO80P53115 1489 aa10.27□□□□□ -0.77
YGL088WYGL088W MTC1P47018 478 aaKnown RBP10.24□□□□□ -0.77
YGL088WYGL088W MON2P48563 1636 aaPredicted RBP10.1□□□□□ -0.79
YGL088WYGL088W RSE1Q04693 1361 aaKnown RBP9.88□□□□□ -0.83
YGL088WYGL088W DNA2P38859 1522 aa9.66□□□□□ -0.86
YGL088WYGL088W DRS1P32892 752 aaKnown RBP9.49□□□□□ -0.89
YGL088WYGL088W KOG1P38873 1557 aa9.48□□□□□ -0.89
YGL088WYGL088W SWR1Q05471 1514 aa9.35□□□□□ -0.91
YGL088WYGL088W FAP1P53971 965 aa9.26□□□□□ -0.93
YGL088WYGL088W SPA2P23201 1466 aaKnown RBP9.19□□□□□ -0.94
YGL088WYGL088W TCB3Q03640 1545 aaKnown RBP8.97□□□□□ -0.97
YGL088WYGL088W MIF2P35201 549 aa8.95□□□□□ -0.98
YGL088WYGL088W TY1B-DR4Q07793 1604 aa8.89□□□□□ -0.99
YGL088WYGL088W PRY3P47033 881 aa8.73□□□□□ -1.01
YGL088WYGL088W ECM5Q03214 1411 aa8.71□□□□□ -1.01
YGL088WYGL088W PRI1P10363 409 aa8.68□□□□□ -1.02
YGL088WYGL088W AAD16Q02895 342 aa8.61□□□□□ -1.03
YGL088WYGL088W YFR006WP43590 535 aa8.57□□□□□ -1.04
YGL088WYGL088W SPT6P23615 1451 aaKnown RBP8.55□□□□□ -1.04
YGL088WYGL088W BUD4P47136 1447 aa8.54□□□□□ -1.04
YGL088WYGL088W REV3P14284 1504 aa8.54□□□□□ -1.04
YGL088WYGL088W HSL1P34244 1518 aa8.48□□□□□ -1.05
YGL088WYGL088W THO2P53552 1597 aaKnown RBP8.48□□□□□ -1.05
YGL088WYGL088W MDS3P53094 1487 aa8.47□□□□□ -1.05
YGL088WYGL088W ISW2Q08773 1120 aa8.45□□□□□ -1.06
YGL088WYGL088W RPG1P38249 964 aaKnown RBP8.41□□□□□ -1.06
YGL088WYGL088W ABP1P15891 592 aaKnown RBP8.36□□□□□ -1.07
YGL088WYGL088W YCK3P39962 524 aa8.36□□□□□ -1.07
YGL088WYGL088W BPT1P14772 1559 aa8.35□□□□□ -1.07
YGL088WYGL088W DIP2Q12220 943 aaPredicted RBP8.35□□□□□ -1.07
YGL088WYGL088W SGS1P35187 1447 aa8.35□□□□□ -1.07
YGL088WYGL088W PEP1P32319 1579 aa8.28□□□□□ -1.08
YGL088WYGL088W HIR3P47171 1648 aa8.26□□□□□ -1.09
YGL088WYGL088W TAF2P23255 1407 aa8.22□□□□□ -1.09
YGL088WYGL088W TSR3Q12094 313 aaKnown RBP8.22□□□□□ -1.09
YGL088WYGL088W YCF1P39109 1515 aaKnown RBP8.18□□□□□ -1.1
YGL088WYGL088W HAA1Q12753 694 aaKnown RBP8.16□□□□□ -1.1
YGL088WYGL088W LTE1P07866 1435 aa8.15□□□□□ -1.1
YGL088WYGL088W MET5P47169 1442 aa8.08□□□□□ -1.12
YGL088WYGL088W MYO2P19524 1574 aaKnown RBP8.06□□□□□ -1.12
YGL088WYGL088W AVT3P36062 692 aa8.06□□□□□ -1.12
YGL088WYGL088W XRN1P22147 1528 aaKnown RBP8.06□□□□□ -1.12
YGL088WYGL088W ITT1Q04638 464 aa8.05□□□□□ -1.12
YGL088WYGL088W ATG2P53855 1592 aa8.04□□□□□ -1.12
YGL088WYGL088W CDC25P04821 1589 aa7.99□□□□□ -1.13
YGL088WYGL088W SKI3P17883 1432 aaKnown RBP7.99□□□□□ -1.13
YGL088WYGL088W MMS1Q06211 1407 aa7.99□□□□□ -1.13
YGL088WYGL088W GEA2P39993 1459 aaKnown RBP7.99□□□□□ -1.13
YGL088WYGL088W DNF1P32660 1571 aa7.98□□□□□ -1.13
YGL088WYGL088W BNI1P41832 1953 aa7.97□□□□□ -1.13
YGL088WYGL088W RPA190P10964 1664 aaKnown RBP7.97□□□□□ -1.13
YGL088WYGL088W SSK2P53599 1579 aa7.92□□□□□ -1.14
YGL088WYGL088W RQC2Q12532 1038 aaKnown RBP7.9□□□□□ -1.14
YGL088WYGL088W ESC1Q03661 1658 aaKnown RBP7.89□□□□□ -1.15
YGL088WYGL088W DRS2P39524 1355 aa7.84□□□□□ -1.15
YGL088WYGL088W UFD4P33202 1483 aa7.84□□□□□ -1.15
YGL088WYGL088W RPL17AP05740 184 aaKnown RBP7.84□□□□□ -1.15
YGL088WYGL088W RPL17BP46990 184 aaKnown RBP7.84□□□□□ -1.15
YGL088WYGL088W BFR2Q06631 534 aaKnown RBP7.84□□□□□ -1.15
YGL088WYGL088W RPO31P04051 1460 aa7.83□□□□□ -1.16
YGL088WYGL088W MRPL32P25348 183 aa7.83□□□□□ -1.16
YGL088WYGL088W IRC20Q06554 1556 aa7.82□□□□□ -1.16
YGL088WYGL088W RKR1Q04781 1562 aa7.8□□□□□ -1.16
YGL088WYGL088W CHD1P32657 1468 aa7.8□□□□□ -1.16
YGL088WYGL088W REB1P21538 810 aa7.77□□□□□ -1.17
YGL088WYGL088W PAN1P32521 1480 aa7.69□□□□□ -1.18
YGL088WYGL088W YPK9Q12697 1472 aa7.68□□□□□ -1.18
YGL088WYGL088W DNF2Q12675 1612 aa7.65□□□□□ -1.18
YGL088WYGL088W ESP1Q03018 1630 aa7.63□□□□□ -1.19
YGL088WYGL088W SIN3P22579 1536 aa7.63□□□□□ -1.19
YGL088WYGL088W YOR093CQ12275 1648 aa7.63□□□□□ -1.19
YGL088WYGL088W TRM732Q03496 1420 aa7.61□□□□□ -1.19
YGL088WYGL088W VPS15P22219 1454 aa7.59□□□□□ -1.19
YGL088WYGL088W SCC2Q04002 1493 aa7.59□□□□□ -1.19
YGL088WYGL088W SPT21P35209 758 aa7.55□□□□□ -1.2
YGL088WYGL088W YGL015CP33199 130 aa7.52□□□□□ -1.21
YGL088WYGL088W CDC27P38042 758 aa7.51□□□□□ -1.21
YGL088WYGL088W TY1B-BRQ12193 1756 aa7.51□□□□□ -1.21
YGL088WYGL088W TY1B-GR3Q12316 1755 aa7.51□□□□□ -1.21
YGL088WYGL088W TY1B-ORQ92393 1755 aa7.51□□□□□ -1.21
YGL088WYGL088W NUP159P40477 1460 aa7.5□□□□□ -1.21
YGL088WYGL088W MMS22Q06164 1454 aa7.48□□□□□ -1.21
YGL088WYGL088W YKR023WP36119 530 aaKnown RBP7.47□□□□□ -1.21
YGL088WYGL088W YRF1-1P0CX20 1796 aa7.45□□□□□ -1.22
YGL088WYGL088W YRF1-5P0CX21 1796 aa7.45□□□□□ -1.22
YGL088WYGL088W YRF1-8P0CX22 1796 aa7.45□□□□□ -1.22
YGL088WYGL088W TY2B-LR1P0C2J3 1770 aa7.43□□□□□ -1.22
YGL088WYGL088W TY2B-FP0CX63 1770 aa7.43□□□□□ -1.22
YGL088WYGL088W TY2B-GR2P0CX64 1770 aa7.43□□□□□ -1.22
YGL088WYGL088W TY2B-CP25384 1770 aa7.43□□□□□ -1.22
YGL088WYGL088W TY2B-DR2Q03494 1770 aa7.43□□□□□ -1.22
YGL088WYGL088W TY1B-DR1Q03855 1755 aa7.43□□□□□ -1.22
YGL088WYGL088W TY2B-DR3Q07791 1770 aaKnown RBP7.43□□□□□ -1.22
YGL088WYGL088W TY2B-OR1Q12113 1770 aa7.43□□□□□ -1.22
YGL088WYGL088W TY2B-DR1Q12472 1770 aa7.43□□□□□ -1.22
YGL088WYGL088W TY2B-OR2Q12501 1770 aa7.43□□□□□ -1.22
YGL088WYGL088W NUP170P38181 1502 aa7.43□□□□□ -1.22
YGL088WYGL088W NTE1Q04958 1679 aa7.41□□□□□ -1.22
YGL088WYGL088W TOP2P06786 1428 aaKnown RBP7.39□□□□□ -1.23
YGL088WYGL088W TY1B-HO13535 1793 aa7.36□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms