RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C MTC1P47018 478 aaKnown RBP12.64□□□□□ -0.39
RPT6YGL048C DRS1P32892 752 aaKnown RBP12.3□□□□□ -0.44
RPT6YGL048C MON2P48563 1636 aaPredicted RBP10.96□□□□□ -0.65
RPT6YGL048C INO80P53115 1489 aa10.95□□□□□ -0.66
RPT6YGL048C FAP1P53971 965 aa10.82□□□□□ -0.68
RPT6YGL048C DIP2Q12220 943 aaPredicted RBP10.61□□□□□ -0.71
RPT6YGL048C TCB3Q03640 1545 aaKnown RBP10.5□□□□□ -0.73
RPT6YGL048C SWR1Q05471 1514 aa10.5□□□□□ -0.73
RPT6YGL048C BFR2Q06631 534 aaKnown RBP10.48□□□□□ -0.73
RPT6YGL048C SGS1P35187 1447 aa10.48□□□□□ -0.73
RPT6YGL048C DNA2P38859 1522 aa10.46□□□□□ -0.74
RPT6YGL048C TY1B-DR4Q07793 1604 aa10.44□□□□□ -0.74
RPT6YGL048C ISW2Q08773 1120 aa10.43□□□□□ -0.74
RPT6YGL048C PRI1P10363 409 aa10.36□□□□□ -0.75
RPT6YGL048C AVT3P36062 692 aa10.32□□□□□ -0.76
RPT6YGL048C KOG1P38873 1557 aa10.27□□□□□ -0.76
RPT6YGL048C AAD16Q02895 342 aa10.26□□□□□ -0.77
RPT6YGL048C RPG1P38249 964 aaKnown RBP10.22□□□□□ -0.77
RPT6YGL048C RSE1Q04693 1361 aaKnown RBP10.14□□□□□ -0.79
RPT6YGL048C PRY3P47033 881 aa10.12□□□□□ -0.79
RPT6YGL048C HSL1P34244 1518 aa10.12□□□□□ -0.79
RPT6YGL048C SPT6P23615 1451 aaKnown RBP10.1□□□□□ -0.79
RPT6YGL048C SPA2P23201 1466 aaKnown RBP9.96□□□□□ -0.82
RPT6YGL048C HIR3P47171 1648 aa9.89□□□□□ -0.83
RPT6YGL048C ECM5Q03214 1411 aa9.88□□□□□ -0.83
RPT6YGL048C TSR3Q12094 313 aaKnown RBP9.79□□□□□ -0.84
RPT6YGL048C BUD4P47136 1447 aa9.78□□□□□ -0.84
RPT6YGL048C RPL17AP05740 184 aaKnown RBP9.75□□□□□ -0.85
RPT6YGL048C RPL17BP46990 184 aaKnown RBP9.75□□□□□ -0.85
RPT6YGL048C THO2P53552 1597 aaKnown RBP9.75□□□□□ -0.85
RPT6YGL048C XRN1P22147 1528 aaKnown RBP9.73□□□□□ -0.85
RPT6YGL048C REB1P21538 810 aa9.71□□□□□ -0.86
RPT6YGL048C SSN2P38931 1420 aa9.7□□□□□ -0.86
RPT6YGL048C MDS3P53094 1487 aa9.65□□□□□ -0.87
RPT6YGL048C PEP1P32319 1579 aa9.61□□□□□ -0.87
RPT6YGL048C TFA1P36100 482 aa9.59□□□□□ -0.87
RPT6YGL048C HAA1Q12753 694 aaKnown RBP9.59□□□□□ -0.87
RPT6YGL048C REV3P14284 1504 aa9.55□□□□□ -0.88
RPT6YGL048C ATG2P53855 1592 aa9.53□□□□□ -0.88
RPT6YGL048C MRPL32P25348 183 aa9.49□□□□□ -0.89
RPT6YGL048C SIN3P22579 1536 aa9.45□□□□□ -0.9
RPT6YGL048C YCK3P39962 524 aa9.44□□□□□ -0.9
RPT6YGL048C TAF2P23255 1407 aa9.44□□□□□ -0.9
RPT6YGL048C SKI3P17883 1432 aaKnown RBP9.4□□□□□ -0.9
RPT6YGL048C BPT1P14772 1559 aa9.37□□□□□ -0.91
RPT6YGL048C SSK2P53599 1579 aa9.35□□□□□ -0.91
RPT6YGL048C SPT21P35209 758 aa9.33□□□□□ -0.92
RPT6YGL048C ESP1Q03018 1630 aa9.27□□□□□ -0.93
RPT6YGL048C UFD4P33202 1483 aa9.25□□□□□ -0.93
RPT6YGL048C YPK9Q12697 1472 aa9.22□□□□□ -0.93
RPT6YGL048C YCF1P39109 1515 aaKnown RBP9.22□□□□□ -0.93
RPT6YGL048C SCC2Q04002 1493 aa9.21□□□□□ -0.93
RPT6YGL048C RPO31P04051 1460 aa9.18□□□□□ -0.94
RPT6YGL048C RIM101P33400 625 aa9.14□□□□□ -0.95
RPT6YGL048C MYO2P19524 1574 aaKnown RBP9.12□□□□□ -0.95
RPT6YGL048C YKR023WP36119 530 aaKnown RBP9.1□□□□□ -0.95
RPT6YGL048C CHD1P32657 1468 aa9.09□□□□□ -0.95
RPT6YGL048C CDC25P04821 1589 aa9.03□□□□□ -0.96
RPT6YGL048C DNF1P32660 1571 aa9.03□□□□□ -0.96
RPT6YGL048C TOP2P06786 1428 aaKnown RBP9.03□□□□□ -0.96
RPT6YGL048C TY2B-LR1P0C2J3 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-FP0CX63 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-GR2P0CX64 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-CP25384 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-DR2Q03494 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY1B-DR1Q03855 1755 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-DR3Q07791 1770 aaKnown RBP9.01□□□□□ -0.97
RPT6YGL048C TY2B-OR1Q12113 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-DR1Q12472 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-OR2Q12501 1770 aa9.01□□□□□ -0.97
RPT6YGL048C MET5P47169 1442 aa9□□□□□ -0.97
RPT6YGL048C PAN1P32521 1480 aa9□□□□□ -0.97
RPT6YGL048C CDC27P38042 758 aa8.99□□□□□ -0.97
RPT6YGL048C POL1P13382 1468 aa8.97□□□□□ -0.97
RPT6YGL048C YGL015CP33199 130 aa8.97□□□□□ -0.97
RPT6YGL048C TY1B-BRQ12193 1756 aa8.96□□□□□ -0.97
RPT6YGL048C TY1B-GR3Q12316 1755 aa8.96□□□□□ -0.97
RPT6YGL048C TY1B-ORQ92393 1755 aa8.96□□□□□ -0.97
RPT6YGL048C TFC8Q12308 588 aa8.96□□□□□ -0.98
RPT6YGL048C RQC2Q12532 1038 aaKnown RBP8.96□□□□□ -0.98
RPT6YGL048C RKR1Q04781 1562 aa8.93□□□□□ -0.98
RPT6YGL048C HOP09932 586 aa8.92□□□□□ -0.98
RPT6YGL048C MMS22Q06164 1454 aa8.91□□□□□ -0.98
RPT6YGL048C SMC4Q12267 1418 aa8.89□□□□□ -0.99
RPT6YGL048C YOR1P53049 1477 aa8.89□□□□□ -0.99
RPT6YGL048C TY2B-BQ12491 1770 aa8.89□□□□□ -0.99
RPT6YGL048C RPA190P10964 1664 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C STU1P38198 1513 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-HO13535 1793 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-DR5P0C2I2 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-DR6P0C2I3 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-LR2P0C2I5 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-LR3P0C2I6 1755 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C TY1B-PR1P0C2I9 1755 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C TY1B-PR2P0C2J0 1756 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-PR3P0C2J1 1755 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C TY1B-JR1P47098 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-ML2Q03434 1755 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C TY1B-ER1Q03612 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-ML1Q04711 1755 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms