RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C MTC1P47018 478 aaKnown RBP12.64□□□□□ -0.39
RPT6YGL048C DRS1P32892 752 aaKnown RBP12.3□□□□□ -0.44
RPT6YGL048C MON2P48563 1636 aaPredicted RBP10.96□□□□□ -0.65
RPT6YGL048C INO80P53115 1489 aa10.95□□□□□ -0.66
RPT6YGL048C FAP1P53971 965 aa10.82□□□□□ -0.68
RPT6YGL048C DIP2Q12220 943 aaPredicted RBP10.61□□□□□ -0.71
RPT6YGL048C TCB3Q03640 1545 aaKnown RBP10.5□□□□□ -0.73
RPT6YGL048C SWR1Q05471 1514 aa10.5□□□□□ -0.73
RPT6YGL048C BFR2Q06631 534 aaKnown RBP10.48□□□□□ -0.73
RPT6YGL048C SGS1P35187 1447 aa10.48□□□□□ -0.73
RPT6YGL048C DNA2P38859 1522 aa10.46□□□□□ -0.74
RPT6YGL048C TY1B-DR4Q07793 1604 aa10.44□□□□□ -0.74
RPT6YGL048C ISW2Q08773 1120 aa10.43□□□□□ -0.74
RPT6YGL048C PRI1P10363 409 aa10.36□□□□□ -0.75
RPT6YGL048C AVT3P36062 692 aa10.32□□□□□ -0.76
RPT6YGL048C KOG1P38873 1557 aa10.27□□□□□ -0.76
RPT6YGL048C AAD16Q02895 342 aa10.26□□□□□ -0.77
RPT6YGL048C RPG1P38249 964 aaKnown RBP10.22□□□□□ -0.77
RPT6YGL048C RSE1Q04693 1361 aaKnown RBP10.14□□□□□ -0.79
RPT6YGL048C PRY3P47033 881 aa10.12□□□□□ -0.79
RPT6YGL048C HSL1P34244 1518 aa10.12□□□□□ -0.79
RPT6YGL048C SPT6P23615 1451 aaKnown RBP10.1□□□□□ -0.79
RPT6YGL048C SPA2P23201 1466 aaKnown RBP9.96□□□□□ -0.82
RPT6YGL048C HIR3P47171 1648 aa9.89□□□□□ -0.83
RPT6YGL048C ECM5Q03214 1411 aa9.88□□□□□ -0.83
RPT6YGL048C TSR3Q12094 313 aaKnown RBP9.79□□□□□ -0.84
RPT6YGL048C BUD4P47136 1447 aa9.78□□□□□ -0.84
RPT6YGL048C RPL17AP05740 184 aaKnown RBP9.75□□□□□ -0.85
RPT6YGL048C RPL17BP46990 184 aaKnown RBP9.75□□□□□ -0.85
RPT6YGL048C THO2P53552 1597 aaKnown RBP9.75□□□□□ -0.85
RPT6YGL048C XRN1P22147 1528 aaKnown RBP9.73□□□□□ -0.85
RPT6YGL048C REB1P21538 810 aa9.71□□□□□ -0.86
RPT6YGL048C SSN2P38931 1420 aa9.7□□□□□ -0.86
RPT6YGL048C MDS3P53094 1487 aa9.65□□□□□ -0.87
RPT6YGL048C PEP1P32319 1579 aa9.61□□□□□ -0.87
RPT6YGL048C TFA1P36100 482 aa9.59□□□□□ -0.87
RPT6YGL048C HAA1Q12753 694 aaKnown RBP9.59□□□□□ -0.87
RPT6YGL048C REV3P14284 1504 aa9.55□□□□□ -0.88
RPT6YGL048C ATG2P53855 1592 aa9.53□□□□□ -0.88
RPT6YGL048C MRPL32P25348 183 aa9.49□□□□□ -0.89
RPT6YGL048C SIN3P22579 1536 aa9.45□□□□□ -0.9
RPT6YGL048C YCK3P39962 524 aa9.44□□□□□ -0.9
RPT6YGL048C TAF2P23255 1407 aa9.44□□□□□ -0.9
RPT6YGL048C SKI3P17883 1432 aaKnown RBP9.4□□□□□ -0.9
RPT6YGL048C BPT1P14772 1559 aa9.37□□□□□ -0.91
RPT6YGL048C SSK2P53599 1579 aa9.35□□□□□ -0.91
RPT6YGL048C SPT21P35209 758 aa9.33□□□□□ -0.92
RPT6YGL048C ESP1Q03018 1630 aa9.27□□□□□ -0.93
RPT6YGL048C UFD4P33202 1483 aa9.25□□□□□ -0.93
RPT6YGL048C YPK9Q12697 1472 aa9.22□□□□□ -0.93
RPT6YGL048C YCF1P39109 1515 aaKnown RBP9.22□□□□□ -0.93
RPT6YGL048C SCC2Q04002 1493 aa9.21□□□□□ -0.93
RPT6YGL048C RPO31P04051 1460 aa9.18□□□□□ -0.94
RPT6YGL048C RIM101P33400 625 aa9.14□□□□□ -0.95
RPT6YGL048C MYO2P19524 1574 aaKnown RBP9.12□□□□□ -0.95
RPT6YGL048C YKR023WP36119 530 aaKnown RBP9.1□□□□□ -0.95
RPT6YGL048C CHD1P32657 1468 aa9.09□□□□□ -0.95
RPT6YGL048C CDC25P04821 1589 aa9.03□□□□□ -0.96
RPT6YGL048C DNF1P32660 1571 aa9.03□□□□□ -0.96
RPT6YGL048C TOP2P06786 1428 aaKnown RBP9.03□□□□□ -0.96
RPT6YGL048C TY2B-LR1P0C2J3 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-FP0CX63 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-GR2P0CX64 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-CP25384 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-DR2Q03494 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY1B-DR1Q03855 1755 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-DR3Q07791 1770 aaKnown RBP9.01□□□□□ -0.97
RPT6YGL048C TY2B-OR1Q12113 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-DR1Q12472 1770 aa9.01□□□□□ -0.97
RPT6YGL048C TY2B-OR2Q12501 1770 aa9.01□□□□□ -0.97
RPT6YGL048C MET5P47169 1442 aa9□□□□□ -0.97
RPT6YGL048C PAN1P32521 1480 aa9□□□□□ -0.97
RPT6YGL048C CDC27P38042 758 aa8.99□□□□□ -0.97
RPT6YGL048C POL1P13382 1468 aa8.97□□□□□ -0.97
RPT6YGL048C YGL015CP33199 130 aa8.97□□□□□ -0.97
RPT6YGL048C TY1B-BRQ12193 1756 aa8.96□□□□□ -0.97
RPT6YGL048C TY1B-GR3Q12316 1755 aa8.96□□□□□ -0.97
RPT6YGL048C TY1B-ORQ92393 1755 aa8.96□□□□□ -0.97
RPT6YGL048C TFC8Q12308 588 aa8.96□□□□□ -0.98
RPT6YGL048C RQC2Q12532 1038 aaKnown RBP8.96□□□□□ -0.98
RPT6YGL048C RKR1Q04781 1562 aa8.93□□□□□ -0.98
RPT6YGL048C HOP09932 586 aa8.92□□□□□ -0.98
RPT6YGL048C MMS22Q06164 1454 aa8.91□□□□□ -0.98
RPT6YGL048C SMC4Q12267 1418 aa8.89□□□□□ -0.99
RPT6YGL048C YOR1P53049 1477 aa8.89□□□□□ -0.99
RPT6YGL048C TY2B-BQ12491 1770 aa8.89□□□□□ -0.99
RPT6YGL048C RPA190P10964 1664 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C STU1P38198 1513 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-HO13535 1793 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-DR5P0C2I2 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-DR6P0C2I3 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-LR2P0C2I5 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-LR3P0C2I6 1755 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C TY1B-PR1P0C2I9 1755 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C TY1B-PR2P0C2J0 1756 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-PR3P0C2J1 1755 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C TY1B-JR1P47098 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-ML2Q03434 1755 aaKnown RBP8.88□□□□□ -0.99
RPT6YGL048C TY1B-ER1Q03612 1755 aa8.88□□□□□ -0.99
RPT6YGL048C TY1B-ML1Q04711 1755 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms