RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C SGS1P35187 1447 aa20.74■□□□□ 0.91
SCC4YER147C INO80P53115 1489 aa20.24■□□□□ 0.83
SCC4YER147C SPA2P23201 1466 aaKnown RBP20.12■□□□□ 0.81
SCC4YER147C SSN2P38931 1420 aa19.97■□□□□ 0.79
SCC4YER147C TCB3Q03640 1545 aaKnown RBP19.83■□□□□ 0.77
SCC4YER147C TY1B-DR4Q07793 1604 aa19.53■□□□□ 0.72
SCC4YER147C DRS1P32892 752 aaKnown RBP19.39■□□□□ 0.69
SCC4YER147C HSL1P34244 1518 aa19.26■□□□□ 0.67
SCC4YER147C SPT6P23615 1451 aaKnown RBP19.19■□□□□ 0.66
SCC4YER147C MON2P48563 1636 aaPredicted RBP19.13■□□□□ 0.65
SCC4YER147C SWR1Q05471 1514 aa18.94■□□□□ 0.62
SCC4YER147C HIR3P47171 1648 aa18.94■□□□□ 0.62
SCC4YER147C XRN1P22147 1528 aaKnown RBP18.87■□□□□ 0.61
SCC4YER147C REV3P14284 1504 aa18.64■□□□□ 0.57
SCC4YER147C SIN3P22579 1536 aa18.53■□□□□ 0.56
SCC4YER147C THO2P53552 1597 aaKnown RBP18.52■□□□□ 0.56
SCC4YER147C SSK2P53599 1579 aa18.44■□□□□ 0.54
SCC4YER147C TAF2P23255 1407 aa18.38■□□□□ 0.53
SCC4YER147C ESP1Q03018 1630 aa18.24■□□□□ 0.51
SCC4YER147C SKI3P17883 1432 aaKnown RBP18.22■□□□□ 0.51
SCC4YER147C DNA2P38859 1522 aa18.22■□□□□ 0.51
SCC4YER147C MYO2P19524 1574 aaKnown RBP18.22■□□□□ 0.51
SCC4YER147C KOG1P38873 1557 aa18.21■□□□□ 0.51
SCC4YER147C CHD1P32657 1468 aa18.16■□□□□ 0.5
SCC4YER147C BUD4P47136 1447 aa18.15■□□□□ 0.5
SCC4YER147C MMS22Q06164 1454 aa18.09■□□□□ 0.49
SCC4YER147C ATG2P53855 1592 aa18.06■□□□□ 0.48
SCC4YER147C ECM5Q03214 1411 aa18.04■□□□□ 0.48
SCC4YER147C POL1P13382 1468 aa18.03■□□□□ 0.48
SCC4YER147C YPK9Q12697 1472 aa17.98■□□□□ 0.47
SCC4YER147C STU1P38198 1513 aa17.96■□□□□ 0.47
SCC4YER147C YTA7P40340 1379 aa17.89■□□□□ 0.45
SCC4YER147C PEP1P32319 1579 aa17.83■□□□□ 0.44
SCC4YER147C MDS3P53094 1487 aa17.79■□□□□ 0.44
SCC4YER147C SCC2Q04002 1493 aa17.78■□□□□ 0.44
SCC4YER147C BPT1P14772 1559 aa17.76■□□□□ 0.43
SCC4YER147C RKR1Q04781 1562 aa17.75■□□□□ 0.43
SCC4YER147C YOR1P53049 1477 aa17.73■□□□□ 0.43
SCC4YER147C RPO31P04051 1460 aa17.7■□□□□ 0.42
SCC4YER147C SAS10Q12136 610 aaPredicted RBP17.68■□□□□ 0.42
SCC4YER147C MYO4P32492 1471 aa17.65■□□□□ 0.42
SCC4YER147C TOP2P06786 1428 aaKnown RBP17.62■□□□□ 0.41
SCC4YER147C SMC4Q12267 1418 aa17.59■□□□□ 0.41
SCC4YER147C UFD4P33202 1483 aa17.56■□□□□ 0.4
SCC4YER147C YCF1P39109 1515 aaKnown RBP17.55■□□□□ 0.4
SCC4YER147C TRM732Q03496 1420 aa17.45■□□□□ 0.38
SCC4YER147C TY2B-LR1P0C2J3 1770 aa17.44■□□□□ 0.38
SCC4YER147C TY2B-FP0CX63 1770 aa17.44■□□□□ 0.38
SCC4YER147C TY2B-GR2P0CX64 1770 aa17.44■□□□□ 0.38
SCC4YER147C TY2B-CP25384 1770 aa17.44■□□□□ 0.38
SCC4YER147C TY2B-DR2Q03494 1770 aa17.44■□□□□ 0.38
SCC4YER147C TY1B-DR1Q03855 1755 aa17.44■□□□□ 0.38
SCC4YER147C TY2B-DR3Q07791 1770 aaKnown RBP17.44■□□□□ 0.38
SCC4YER147C TY2B-OR1Q12113 1770 aa17.44■□□□□ 0.38
SCC4YER147C TY2B-DR1Q12472 1770 aa17.44■□□□□ 0.38
SCC4YER147C TY2B-OR2Q12501 1770 aa17.44■□□□□ 0.38
SCC4YER147C TAF7Q05021 590 aa17.44■□□□□ 0.38
SCC4YER147C SNQ2P32568 1501 aaKnown RBP17.41■□□□□ 0.38
SCC4YER147C RSE1Q04693 1361 aaKnown RBP17.41■□□□□ 0.38
SCC4YER147C TY1B-DR3Q99231 1755 aa17.4■□□□□ 0.38
SCC4YER147C STH1P32597 1359 aa17.38■□□□□ 0.37
SCC4YER147C IKI3Q06706 1349 aaKnown RBP17.37■□□□□ 0.37
SCC4YER147C TY2B-BQ12491 1770 aa17.31■□□□□ 0.36
SCC4YER147C MLP2P40457 1679 aa17.25■□□□□ 0.35
SCC4YER147C SPP41P38904 1435 aa17.21■□□□□ 0.35
SCC4YER147C PDR15Q04182 1529 aaKnown RBP17.21■□□□□ 0.35
SCC4YER147C NUP170P38181 1502 aa17.17■□□□□ 0.34
SCC4YER147C TY1B-HO13535 1793 aa17.16■□□□□ 0.34
SCC4YER147C TY1B-DR5P0C2I2 1755 aa17.16■□□□□ 0.34
SCC4YER147C TY1B-DR6P0C2I3 1755 aa17.16■□□□□ 0.34
SCC4YER147C TY1B-LR2P0C2I5 1755 aa17.16■□□□□ 0.34
SCC4YER147C TY1B-LR3P0C2I6 1755 aaKnown RBP17.16■□□□□ 0.34
SCC4YER147C TY1B-PR1P0C2I9 1755 aaKnown RBP17.16■□□□□ 0.34
SCC4YER147C TY1B-PR2P0C2J0 1756 aa17.16■□□□□ 0.34
SCC4YER147C TY1B-PR3P0C2J1 1755 aaKnown RBP17.16■□□□□ 0.34
SCC4YER147C TY1B-JR1P47098 1755 aa17.16■□□□□ 0.34
SCC4YER147C TY1B-ML2Q03434 1755 aaKnown RBP17.16■□□□□ 0.34
SCC4YER147C TY1B-ER1Q03612 1755 aa17.16■□□□□ 0.34
SCC4YER147C TY1B-ML1Q04711 1755 aaKnown RBP17.16■□□□□ 0.34
SCC4YER147C TY1B-GR2Q12269 1755 aa17.16■□□□□ 0.34
SCC4YER147C TY1B-OLQ12273 1755 aa17.16■□□□□ 0.34
SCC4YER147C TY1B-PLQ12414 1755 aaKnown RBP17.16■□□□□ 0.34
SCC4YER147C GEA1P47102 1408 aaPredicted RBP17.15■□□□□ 0.34
SCC4YER147C IFH1P39520 1085 aa17.14■□□□□ 0.33
SCC4YER147C TY1B-BRQ12193 1756 aa17.13■□□□□ 0.33
SCC4YER147C TY1B-GR3Q12316 1755 aa17.13■□□□□ 0.33
SCC4YER147C TY1B-ORQ92393 1755 aa17.13■□□□□ 0.33
SCC4YER147C ULS1Q08562 1619 aa17.11■□□□□ 0.33
SCC4YER147C RQC2Q12532 1038 aaKnown RBP17.11■□□□□ 0.33
SCC4YER147C SSM4P40318 1319 aa17.09■□□□□ 0.33
SCC4YER147C TSC11P40061 1430 aa17.08■□□□□ 0.33
SCC4YER147C VTH1P40438 1549 aa17.07■□□□□ 0.32
SCC4YER147C VTH2P40890 1549 aa17.07■□□□□ 0.32
SCC4YER147C CDC25P04821 1589 aa17.04■□□□□ 0.32
SCC4YER147C PAN1P32521 1480 aa16.99■□□□□ 0.31
SCC4YER147C SNT2P53127 1403 aa16.97■□□□□ 0.31
SCC4YER147C TY3B-GQ99315 1547 aa16.93■□□□□ 0.3
SCC4YER147C TY1B-JR2P47100 1755 aaKnown RBP16.9■□□□□ 0.3
SCC4YER147C TY1B-ER2Q03619 1755 aa16.9■□□□□ 0.3
SCC4YER147C TY1B-MR1Q04214 1755 aa16.9■□□□□ 0.3
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms