RNA–Protein interactions for RNA: YDR294C

DPL1, Transcript of Dihydrosphingosine phosphate lyase, yeastyeast

Gene DPL1, Length 1,770 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPL1YDR294C SGS1P35187 1447 aa14.49□□□□□ -0.09
DPL1YDR294C SPA2P23201 1466 aaKnown RBP14□□□□□ -0.17
DPL1YDR294C SSN2P38931 1420 aa13.97□□□□□ -0.17
DPL1YDR294C INO80P53115 1489 aa13.97□□□□□ -0.17
DPL1YDR294C TCB3Q03640 1545 aaKnown RBP13.69□□□□□ -0.22
DPL1YDR294C DRS1P32892 752 aaKnown RBP13.6□□□□□ -0.23
DPL1YDR294C TY1B-DR4Q07793 1604 aa13.5□□□□□ -0.25
DPL1YDR294C HSL1P34244 1518 aa13.36□□□□□ -0.27
DPL1YDR294C SPT6P23615 1451 aaKnown RBP13.32□□□□□ -0.28
DPL1YDR294C HIR3P47171 1648 aa13.15□□□□□ -0.3
DPL1YDR294C MON2P48563 1636 aaPredicted RBP13.15□□□□□ -0.3
DPL1YDR294C XRN1P22147 1528 aaKnown RBP13.15□□□□□ -0.3
DPL1YDR294C SWR1Q05471 1514 aa13.1□□□□□ -0.31
DPL1YDR294C REV3P14284 1504 aa12.95□□□□□ -0.34
DPL1YDR294C TAF2P23255 1407 aa12.9□□□□□ -0.34
DPL1YDR294C THO2P53552 1597 aaKnown RBP12.82□□□□□ -0.36
DPL1YDR294C SIN3P22579 1536 aa12.81□□□□□ -0.36
DPL1YDR294C SSK2P53599 1579 aa12.78□□□□□ -0.36
DPL1YDR294C SKI3P17883 1432 aaKnown RBP12.74□□□□□ -0.37
DPL1YDR294C MMS22Q06164 1454 aa12.67□□□□□ -0.38
DPL1YDR294C ESP1Q03018 1630 aa12.66□□□□□ -0.38
DPL1YDR294C CHD1P32657 1468 aa12.64□□□□□ -0.39
DPL1YDR294C DNA2P38859 1522 aa12.61□□□□□ -0.39
DPL1YDR294C MYO2P19524 1574 aaKnown RBP12.6□□□□□ -0.39
DPL1YDR294C BUD4P47136 1447 aa12.55□□□□□ -0.4
DPL1YDR294C STU1P38198 1513 aa12.55□□□□□ -0.4
DPL1YDR294C ECM5Q03214 1411 aa12.54□□□□□ -0.4
DPL1YDR294C POL1P13382 1468 aa12.54□□□□□ -0.4
DPL1YDR294C KOG1P38873 1557 aa12.51□□□□□ -0.41
DPL1YDR294C ATG2P53855 1592 aa12.51□□□□□ -0.41
DPL1YDR294C SAS10Q12136 610 aaPredicted RBP12.49□□□□□ -0.41
DPL1YDR294C YPK9Q12697 1472 aa12.47□□□□□ -0.41
DPL1YDR294C YTA7P40340 1379 aa12.46□□□□□ -0.42
DPL1YDR294C BPT1P14772 1559 aa12.45□□□□□ -0.42
DPL1YDR294C RSE1Q04693 1361 aaKnown RBP12.43□□□□□ -0.42
DPL1YDR294C RKR1Q04781 1562 aa12.35□□□□□ -0.43
DPL1YDR294C PEP1P32319 1579 aa12.35□□□□□ -0.43
DPL1YDR294C SCC2Q04002 1493 aa12.34□□□□□ -0.43
DPL1YDR294C YOR1P53049 1477 aa12.33□□□□□ -0.44
DPL1YDR294C MDS3P53094 1487 aa12.3□□□□□ -0.44
DPL1YDR294C RPO31P04051 1460 aa12.28□□□□□ -0.44
DPL1YDR294C TRM732Q03496 1420 aa12.27□□□□□ -0.45
DPL1YDR294C MYO4P32492 1471 aa12.24□□□□□ -0.45
DPL1YDR294C UFD4P33202 1483 aa12.23□□□□□ -0.45
DPL1YDR294C TOP2P06786 1428 aaKnown RBP12.23□□□□□ -0.45
DPL1YDR294C SMC4Q12267 1418 aa12.2□□□□□ -0.46
DPL1YDR294C IKI3Q06706 1349 aaKnown RBP12.19□□□□□ -0.46
DPL1YDR294C YCF1P39109 1515 aaKnown RBP12.19□□□□□ -0.46
DPL1YDR294C MTC1P47018 478 aaKnown RBP12.18□□□□□ -0.46
DPL1YDR294C STH1P32597 1359 aa12.17□□□□□ -0.46
DPL1YDR294C SNQ2P32568 1501 aaKnown RBP12.15□□□□□ -0.46
DPL1YDR294C TAF7Q05021 590 aa12.13□□□□□ -0.47
DPL1YDR294C TY2B-LR1P0C2J3 1770 aa12.11□□□□□ -0.47
DPL1YDR294C TY2B-FP0CX63 1770 aa12.11□□□□□ -0.47
DPL1YDR294C TY2B-GR2P0CX64 1770 aa12.11□□□□□ -0.47
DPL1YDR294C TY2B-CP25384 1770 aa12.11□□□□□ -0.47
DPL1YDR294C TY2B-DR2Q03494 1770 aa12.11□□□□□ -0.47
DPL1YDR294C TY1B-DR1Q03855 1755 aa12.11□□□□□ -0.47
DPL1YDR294C TY2B-DR3Q07791 1770 aaKnown RBP12.11□□□□□ -0.47
DPL1YDR294C TY2B-OR1Q12113 1770 aa12.11□□□□□ -0.47
DPL1YDR294C TY2B-DR1Q12472 1770 aa12.11□□□□□ -0.47
DPL1YDR294C TY2B-OR2Q12501 1770 aa12.11□□□□□ -0.47
DPL1YDR294C IFH1P39520 1085 aa12.09□□□□□ -0.47
DPL1YDR294C TY1B-DR3Q99231 1755 aa12.09□□□□□ -0.47
DPL1YDR294C SSM4P40318 1319 aa12.07□□□□□ -0.48
DPL1YDR294C TY2B-BQ12491 1770 aa12.01□□□□□ -0.49
DPL1YDR294C PDR15Q04182 1529 aaKnown RBP12.01□□□□□ -0.49
DPL1YDR294C RQC2Q12532 1038 aaKnown RBP12□□□□□ -0.49
DPL1YDR294C GEA1P47102 1408 aaPredicted RBP11.99□□□□□ -0.49
DPL1YDR294C MLP2P40457 1679 aa11.99□□□□□ -0.49
DPL1YDR294C NUP170P38181 1502 aa11.98□□□□□ -0.49
DPL1YDR294C SPP41P38904 1435 aa11.97□□□□□ -0.49
DPL1YDR294C ULS1Q08562 1619 aa11.92□□□□□ -0.5
DPL1YDR294C TSC11P40061 1430 aa11.9□□□□□ -0.51
DPL1YDR294C NSR1P27476 414 aaKnown RBP RIP-Chip data11.9□□□□□ -0.51not detected
DPL1YDR294C TY1B-HO13535 1793 aa11.89□□□□□ -0.51
DPL1YDR294C TY1B-DR5P0C2I2 1755 aa11.89□□□□□ -0.51
DPL1YDR294C TY1B-DR6P0C2I3 1755 aa11.89□□□□□ -0.51
DPL1YDR294C TY1B-LR2P0C2I5 1755 aa11.89□□□□□ -0.51
DPL1YDR294C TY1B-LR3P0C2I6 1755 aaKnown RBP11.89□□□□□ -0.51
DPL1YDR294C TY1B-PR1P0C2I9 1755 aaKnown RBP11.89□□□□□ -0.51
DPL1YDR294C TY1B-PR2P0C2J0 1756 aa11.89□□□□□ -0.51
DPL1YDR294C TY1B-PR3P0C2J1 1755 aaKnown RBP11.89□□□□□ -0.51
DPL1YDR294C TY1B-JR1P47098 1755 aa11.89□□□□□ -0.51
DPL1YDR294C TY1B-ML2Q03434 1755 aaKnown RBP11.89□□□□□ -0.51
DPL1YDR294C TY1B-ER1Q03612 1755 aa11.89□□□□□ -0.51
DPL1YDR294C TY1B-ML1Q04711 1755 aaKnown RBP11.89□□□□□ -0.51
DPL1YDR294C TY1B-GR2Q12269 1755 aa11.89□□□□□ -0.51
DPL1YDR294C TY1B-OLQ12273 1755 aa11.89□□□□□ -0.51
DPL1YDR294C TY1B-PLQ12414 1755 aaKnown RBP11.89□□□□□ -0.51
DPL1YDR294C TY1B-BRQ12193 1756 aa11.88□□□□□ -0.51
DPL1YDR294C TY1B-GR3Q12316 1755 aa11.88□□□□□ -0.51
DPL1YDR294C TY1B-ORQ92393 1755 aa11.88□□□□□ -0.51
DPL1YDR294C VTH1P40438 1549 aa11.85□□□□□ -0.51
DPL1YDR294C VTH2P40890 1549 aa11.85□□□□□ -0.51
DPL1YDR294C PAN1P32521 1480 aa11.85□□□□□ -0.51
DPL1YDR294C TY3B-GQ99315 1547 aa11.84□□□□□ -0.51
DPL1YDR294C SNT2P53127 1403 aa11.81□□□□□ -0.52
DPL1YDR294C CDC25P04821 1589 aa11.78□□□□□ -0.52
DPL1YDR294C RTT106P40161 455 aa11.77□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms