RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C MON2P48563 1636 aaPredicted RBP7.17□□□□□ -1.26
BRE4YDL231C TY1B-DR4Q07793 1604 aa7.1□□□□□ -1.27
BRE4YDL231C DRS1P32892 752 aaKnown RBP7.08□□□□□ -1.28
BRE4YDL231C INO80P53115 1489 aa7.07□□□□□ -1.28
BRE4YDL231C TCB3Q03640 1545 aaKnown RBP7.01□□□□□ -1.29
BRE4YDL231C SGS1P35187 1447 aa7.01□□□□□ -1.29
BRE4YDL231C SWR1Q05471 1514 aa6.87□□□□□ -1.31
BRE4YDL231C MTC1P47018 478 aaKnown RBP6.84□□□□□ -1.31
BRE4YDL231C HSL1P34244 1518 aa6.77□□□□□ -1.33
BRE4YDL231C SPA2P23201 1466 aaKnown RBP6.7□□□□□ -1.34
BRE4YDL231C SPT6P23615 1451 aaKnown RBP6.66□□□□□ -1.34
BRE4YDL231C KOG1P38873 1557 aa6.66□□□□□ -1.34
BRE4YDL231C HIR3P47171 1648 aa6.63□□□□□ -1.35
BRE4YDL231C DNA2P38859 1522 aa6.62□□□□□ -1.35
BRE4YDL231C SSN2P38931 1420 aa6.61□□□□□ -1.35
BRE4YDL231C TAF2P23255 1407 aa6.58□□□□□ -1.36
BRE4YDL231C THO2P53552 1597 aaKnown RBP6.56□□□□□ -1.36
BRE4YDL231C SIN3P22579 1536 aa6.54□□□□□ -1.36
BRE4YDL231C RQC2Q12532 1038 aaKnown RBP6.49□□□□□ -1.37
BRE4YDL231C XRN1P22147 1528 aaKnown RBP6.46□□□□□ -1.38
BRE4YDL231C ATG2P53855 1592 aa6.44□□□□□ -1.38
BRE4YDL231C SAS10Q12136 610 aaPredicted RBP6.44□□□□□ -1.38
BRE4YDL231C PEP1P32319 1579 aa6.44□□□□□ -1.38
BRE4YDL231C REV3P14284 1504 aa6.43□□□□□ -1.38
BRE4YDL231C SSK2P53599 1579 aa6.43□□□□□ -1.38
BRE4YDL231C SKI3P17883 1432 aaKnown RBP6.38□□□□□ -1.39
BRE4YDL231C ESP1Q03018 1630 aa6.38□□□□□ -1.39
BRE4YDL231C BUD4P47136 1447 aa6.37□□□□□ -1.39
BRE4YDL231C ECM5Q03214 1411 aa6.35□□□□□ -1.39
BRE4YDL231C MDS3P53094 1487 aa6.33□□□□□ -1.4
BRE4YDL231C TFA1P36100 482 aa6.29□□□□□ -1.4
BRE4YDL231C MYO2P19524 1574 aaKnown RBP6.29□□□□□ -1.4
BRE4YDL231C RSE1Q04693 1361 aaKnown RBP6.27□□□□□ -1.41
BRE4YDL231C IFH1P39520 1085 aa6.23□□□□□ -1.41
BRE4YDL231C YPK9Q12697 1472 aa6.23□□□□□ -1.41
BRE4YDL231C TY2B-LR1P0C2J3 1770 aa6.23□□□□□ -1.41
BRE4YDL231C TY2B-FP0CX63 1770 aa6.23□□□□□ -1.41
BRE4YDL231C TY2B-GR2P0CX64 1770 aa6.23□□□□□ -1.41
BRE4YDL231C TY2B-CP25384 1770 aa6.23□□□□□ -1.41
BRE4YDL231C TY2B-DR2Q03494 1770 aa6.23□□□□□ -1.41
BRE4YDL231C TY1B-DR1Q03855 1755 aa6.23□□□□□ -1.41
BRE4YDL231C TY2B-DR3Q07791 1770 aaKnown RBP6.23□□□□□ -1.41
BRE4YDL231C TY2B-OR1Q12113 1770 aa6.23□□□□□ -1.41
BRE4YDL231C TY2B-DR1Q12472 1770 aa6.23□□□□□ -1.41
BRE4YDL231C TY2B-OR2Q12501 1770 aa6.23□□□□□ -1.41
BRE4YDL231C BFR2Q06631 534 aaKnown RBP6.2□□□□□ -1.42
BRE4YDL231C TAF7Q05021 590 aa6.19□□□□□ -1.42
BRE4YDL231C TY1B-BRQ12193 1756 aa6.18□□□□□ -1.42
BRE4YDL231C TY1B-GR3Q12316 1755 aa6.18□□□□□ -1.42
BRE4YDL231C TY1B-ORQ92393 1755 aa6.18□□□□□ -1.42
BRE4YDL231C TY1B-DR3Q99231 1755 aa6.18□□□□□ -1.42
BRE4YDL231C SCC2Q04002 1493 aa6.17□□□□□ -1.42
BRE4YDL231C TY2B-BQ12491 1770 aa6.17□□□□□ -1.42
BRE4YDL231C RPO31P04051 1460 aa6.16□□□□□ -1.42
BRE4YDL231C TY1B-HO13535 1793 aa6.15□□□□□ -1.42
BRE4YDL231C TY1B-DR5P0C2I2 1755 aa6.15□□□□□ -1.42
BRE4YDL231C TY1B-DR6P0C2I3 1755 aa6.15□□□□□ -1.42
BRE4YDL231C TY1B-LR2P0C2I5 1755 aa6.15□□□□□ -1.42
BRE4YDL231C TY1B-LR3P0C2I6 1755 aaKnown RBP6.15□□□□□ -1.42
BRE4YDL231C TY1B-PR1P0C2I9 1755 aaKnown RBP6.15□□□□□ -1.42
BRE4YDL231C TY1B-PR2P0C2J0 1756 aa6.15□□□□□ -1.42
BRE4YDL231C TY1B-PR3P0C2J1 1755 aaKnown RBP6.15□□□□□ -1.42
BRE4YDL231C TY1B-JR1P47098 1755 aa6.15□□□□□ -1.42
BRE4YDL231C TY1B-ML2Q03434 1755 aaKnown RBP6.15□□□□□ -1.42
BRE4YDL231C TY1B-ER1Q03612 1755 aa6.15□□□□□ -1.42
BRE4YDL231C TY1B-ML1Q04711 1755 aaKnown RBP6.15□□□□□ -1.42
BRE4YDL231C TY1B-GR2Q12269 1755 aa6.15□□□□□ -1.42
BRE4YDL231C TY1B-OLQ12273 1755 aa6.15□□□□□ -1.42
BRE4YDL231C TY1B-PLQ12414 1755 aaKnown RBP6.15□□□□□ -1.42
BRE4YDL231C POL1P13382 1468 aa6.12□□□□□ -1.43
BRE4YDL231C YCF1P39109 1515 aaKnown RBP6.12□□□□□ -1.43
BRE4YDL231C BPT1P14772 1559 aa6.11□□□□□ -1.43
BRE4YDL231C STU1P38198 1513 aa6.11□□□□□ -1.43
BRE4YDL231C UFD4P33202 1483 aa6.07□□□□□ -1.44
BRE4YDL231C RTT106P40161 455 aa6.07□□□□□ -1.44
BRE4YDL231C RKR1Q04781 1562 aa6.05□□□□□ -1.44
BRE4YDL231C YOR1P53049 1477 aa6.04□□□□□ -1.44
BRE4YDL231C CDC25P04821 1589 aa6.04□□□□□ -1.44
BRE4YDL231C STH1P32597 1359 aa6.03□□□□□ -1.44
BRE4YDL231C CHD1P32657 1468 aa6.03□□□□□ -1.44
BRE4YDL231C TOP2P06786 1428 aaKnown RBP6.03□□□□□ -1.44
BRE4YDL231C RPA190P10964 1664 aaKnown RBP6.02□□□□□ -1.45
BRE4YDL231C TY1B-JR2P47100 1755 aaKnown RBP6.02□□□□□ -1.45
BRE4YDL231C TY1B-ER2Q03619 1755 aa6.02□□□□□ -1.45
BRE4YDL231C TY1B-MR1Q04214 1755 aa6.02□□□□□ -1.45
BRE4YDL231C TY1B-MR2Q04670 1755 aaKnown RBP6.02□□□□□ -1.45
BRE4YDL231C TY1B-LR1Q12088 1755 aaKnown RBP6.02□□□□□ -1.45
BRE4YDL231C TY1B-NL1Q12112 1755 aa6.02□□□□□ -1.45
BRE4YDL231C TY1B-GR1Q12141 1755 aa6.02□□□□□ -1.45
BRE4YDL231C TY1B-BLQ12490 1755 aa6.02□□□□□ -1.45
BRE4YDL231C SMC4Q12267 1418 aa6□□□□□ -1.45
BRE4YDL231C CKB1P43639 278 aa6□□□□□ -1.45
BRE4YDL231C ESC1Q03661 1658 aaKnown RBP6□□□□□ -1.45
BRE4YDL231C YTA7P40340 1379 aa5.99□□□□□ -1.45
BRE4YDL231C MYO4P32492 1471 aa5.97□□□□□ -1.45
BRE4YDL231C NTE1Q04958 1679 aa5.95□□□□□ -1.46
BRE4YDL231C RPO21P04050 1733 aaKnown RBP5.95□□□□□ -1.46
BRE4YDL231C DIP2Q12220 943 aaPredicted RBP5.95□□□□□ -1.46
BRE4YDL231C ORC1P54784 914 aaPredicted RBP5.94□□□□□ -1.46
BRE4YDL231C MMS22Q06164 1454 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms