RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C MTC1P47018 478 aaKnown RBP14.22□□□□□ -0.13
RRP43YCR035C DRS1P32892 752 aaKnown RBP14.18□□□□□ -0.14
RRP43YCR035C SGS1P35187 1447 aa13.74□□□□□ -0.21
RRP43YCR035C INO80P53115 1489 aa13.61□□□□□ -0.23
RRP43YCR035C MON2P48563 1636 aaPredicted RBP13.53□□□□□ -0.24
RRP43YCR035C TCB3Q03640 1545 aaKnown RBP13.44□□□□□ -0.26
RRP43YCR035C TY1B-DR4Q07793 1604 aa13.27□□□□□ -0.29
RRP43YCR035C SWR1Q05471 1514 aa13.17□□□□□ -0.3
RRP43YCR035C SPT6P23615 1451 aaKnown RBP12.98□□□□□ -0.33
RRP43YCR035C HSL1P34244 1518 aa12.98□□□□□ -0.33
RRP43YCR035C DNA2P38859 1522 aa12.95□□□□□ -0.34
RRP43YCR035C SSN2P38931 1420 aa12.92□□□□□ -0.34
RRP43YCR035C SPA2P23201 1466 aaKnown RBP12.91□□□□□ -0.34
RRP43YCR035C KOG1P38873 1557 aa12.81□□□□□ -0.36
RRP43YCR035C HIR3P47171 1648 aa12.74□□□□□ -0.37
RRP43YCR035C XRN1P22147 1528 aaKnown RBP12.65□□□□□ -0.38
RRP43YCR035C ECM5Q03214 1411 aa12.5□□□□□ -0.41
RRP43YCR035C BUD4P47136 1447 aa12.44□□□□□ -0.42
RRP43YCR035C REV3P14284 1504 aa12.42□□□□□ -0.42
RRP43YCR035C THO2P53552 1597 aaKnown RBP12.4□□□□□ -0.42
RRP43YCR035C TAF2P23255 1407 aa12.37□□□□□ -0.43
RRP43YCR035C SIN3P22579 1536 aa12.27□□□□□ -0.45
RRP43YCR035C FAP1P53971 965 aa12.26□□□□□ -0.45
RRP43YCR035C BFR2Q06631 534 aaKnown RBP12.26□□□□□ -0.45
RRP43YCR035C MDS3P53094 1487 aa12.23□□□□□ -0.45
RRP43YCR035C SKI3P17883 1432 aaKnown RBP12.2□□□□□ -0.46
RRP43YCR035C RSE1Q04693 1361 aaKnown RBP12.2□□□□□ -0.46
RRP43YCR035C ATG2P53855 1592 aa12.2□□□□□ -0.46
RRP43YCR035C SSK2P53599 1579 aa12.19□□□□□ -0.46
RRP43YCR035C PEP1P32319 1579 aa12.17□□□□□ -0.46
RRP43YCR035C ESP1Q03018 1630 aa12.11□□□□□ -0.47
RRP43YCR035C DIP2Q12220 943 aaPredicted RBP12.1□□□□□ -0.47
RRP43YCR035C MYO2P19524 1574 aaKnown RBP12.01□□□□□ -0.49
RRP43YCR035C YPK9Q12697 1472 aa11.97□□□□□ -0.49
RRP43YCR035C AVT3P36062 692 aa11.97□□□□□ -0.49
RRP43YCR035C UFD4P33202 1483 aa11.9□□□□□ -0.5
RRP43YCR035C SCC2Q04002 1493 aa11.89□□□□□ -0.51
RRP43YCR035C BPT1P14772 1559 aa11.88□□□□□ -0.51
RRP43YCR035C RPO31P04051 1460 aa11.85□□□□□ -0.51
RRP43YCR035C POL1P13382 1468 aa11.81□□□□□ -0.52
RRP43YCR035C STU1P38198 1513 aa11.76□□□□□ -0.53
RRP43YCR035C TOP2P06786 1428 aaKnown RBP11.75□□□□□ -0.53
RRP43YCR035C YCF1P39109 1515 aaKnown RBP11.74□□□□□ -0.53
RRP43YCR035C RKR1Q04781 1562 aa11.74□□□□□ -0.53
RRP43YCR035C RQC2Q12532 1038 aaKnown RBP11.73□□□□□ -0.53
RRP43YCR035C YOR1P53049 1477 aa11.67□□□□□ -0.54
RRP43YCR035C TY2B-LR1P0C2J3 1770 aa11.67□□□□□ -0.54
RRP43YCR035C TY2B-FP0CX63 1770 aa11.67□□□□□ -0.54
RRP43YCR035C TY2B-GR2P0CX64 1770 aa11.67□□□□□ -0.54
RRP43YCR035C TY2B-CP25384 1770 aa11.67□□□□□ -0.54
RRP43YCR035C TY2B-DR2Q03494 1770 aa11.67□□□□□ -0.54
RRP43YCR035C TY1B-DR1Q03855 1755 aa11.67□□□□□ -0.54
RRP43YCR035C TY2B-DR3Q07791 1770 aaKnown RBP11.67□□□□□ -0.54
RRP43YCR035C TY2B-OR1Q12113 1770 aa11.67□□□□□ -0.54
RRP43YCR035C TY2B-DR1Q12472 1770 aa11.67□□□□□ -0.54
RRP43YCR035C TY2B-OR2Q12501 1770 aa11.67□□□□□ -0.54
RRP43YCR035C SMC4Q12267 1418 aa11.64□□□□□ -0.55
RRP43YCR035C YTA7P40340 1379 aa11.64□□□□□ -0.55
RRP43YCR035C CHD1P32657 1468 aa11.62□□□□□ -0.55
RRP43YCR035C PRY3P47033 881 aa11.58□□□□□ -0.56
RRP43YCR035C CDC25P04821 1589 aa11.58□□□□□ -0.56
RRP43YCR035C TY1B-DR3Q99231 1755 aa11.56□□□□□ -0.56
RRP43YCR035C TFA1P36100 482 aa11.56□□□□□ -0.56
RRP43YCR035C ISW2Q08773 1120 aa11.56□□□□□ -0.56
RRP43YCR035C MMS22Q06164 1454 aa11.56□□□□□ -0.56
RRP43YCR035C TY1B-BRQ12193 1756 aa11.54□□□□□ -0.56
RRP43YCR035C TY1B-GR3Q12316 1755 aa11.54□□□□□ -0.56
RRP43YCR035C TY2B-BQ12491 1770 aa11.54□□□□□ -0.56
RRP43YCR035C TY1B-ORQ92393 1755 aa11.54□□□□□ -0.56
RRP43YCR035C PAN1P32521 1480 aa11.54□□□□□ -0.56
RRP43YCR035C SAS10Q12136 610 aaPredicted RBP11.5□□□□□ -0.57
RRP43YCR035C SPP41P38904 1435 aa11.5□□□□□ -0.57
RRP43YCR035C TY1B-HO13535 1793 aa11.49□□□□□ -0.57
RRP43YCR035C TY1B-DR5P0C2I2 1755 aa11.49□□□□□ -0.57
RRP43YCR035C TY1B-DR6P0C2I3 1755 aa11.49□□□□□ -0.57
RRP43YCR035C TY1B-LR2P0C2I5 1755 aa11.49□□□□□ -0.57
RRP43YCR035C TY1B-LR3P0C2I6 1755 aaKnown RBP11.49□□□□□ -0.57
RRP43YCR035C TY1B-PR1P0C2I9 1755 aaKnown RBP11.49□□□□□ -0.57
RRP43YCR035C TY1B-PR2P0C2J0 1756 aa11.49□□□□□ -0.57
RRP43YCR035C TY1B-PR3P0C2J1 1755 aaKnown RBP11.49□□□□□ -0.57
RRP43YCR035C TY1B-JR1P47098 1755 aa11.49□□□□□ -0.57
RRP43YCR035C TY1B-ML2Q03434 1755 aaKnown RBP11.49□□□□□ -0.57
RRP43YCR035C TY1B-ER1Q03612 1755 aa11.49□□□□□ -0.57
RRP43YCR035C TY1B-ML1Q04711 1755 aaKnown RBP11.49□□□□□ -0.57
RRP43YCR035C TY1B-GR2Q12269 1755 aa11.49□□□□□ -0.57
RRP43YCR035C TY1B-OLQ12273 1755 aa11.49□□□□□ -0.57
RRP43YCR035C TY1B-PLQ12414 1755 aaKnown RBP11.49□□□□□ -0.57
RRP43YCR035C MYO4P32492 1471 aa11.48□□□□□ -0.57
RRP43YCR035C DNF1P32660 1571 aa11.45□□□□□ -0.58
RRP43YCR035C PRI1P10363 409 aa11.45□□□□□ -0.58
RRP43YCR035C ESC1Q03661 1658 aaKnown RBP11.43□□□□□ -0.58
RRP43YCR035C TRM732Q03496 1420 aa11.42□□□□□ -0.58
RRP43YCR035C TSC11P40061 1430 aa11.41□□□□□ -0.58
RRP43YCR035C RPG1P38249 964 aaKnown RBP11.38□□□□□ -0.59
RRP43YCR035C STH1P32597 1359 aa11.38□□□□□ -0.59
RRP43YCR035C VTH1P40438 1549 aa11.36□□□□□ -0.59
RRP43YCR035C VTH2P40890 1549 aa11.36□□□□□ -0.59
RRP43YCR035C SNQ2P32568 1501 aaKnown RBP11.35□□□□□ -0.59
RRP43YCR035C RPA190P10964 1664 aaKnown RBP11.35□□□□□ -0.59
RRP43YCR035C TAF7Q05021 590 aa11.34□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms