RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeastyeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP30YCR021C MTC1P47018 478 aaKnown RBP10.47□□□□□ -0.73
HSP30YCR021C DRS1P32892 752 aaKnown RBP9.87□□□□□ -0.83
HSP30YCR021C FAP1P53971 965 aa9.43□□□□□ -0.9
HSP30YCR021C PRY3P47033 881 aa8.86□□□□□ -0.99
HSP30YCR021C PRI1P10363 409 aa8.81□□□□□ -1
HSP30YCR021C AAD16Q02895 342 aa8.76□□□□□ -1.01
HSP30YCR021C ISW2Q08773 1120 aa8.67□□□□□ -1.02
HSP30YCR021C DIP2Q12220 943 aaPredicted RBP8.64□□□□□ -1.03
HSP30YCR021C RPG1P38249 964 aaKnown RBP8.62□□□□□ -1.03
HSP30YCR021C TSR3Q12094 313 aaKnown RBP8.37□□□□□ -1.07
HSP30YCR021C YCK3P39962 524 aa8.32□□□□□ -1.08
HSP30YCR021C RSE1Q04693 1361 aaKnown RBP8.32□□□□□ -1.08
HSP30YCR021C AVT3P36062 692 aa8.3□□□□□ -1.08
HSP30YCR021C HAA1Q12753 694 aaKnown RBP8.27□□□□□ -1.09
HSP30YCR021C BFR2Q06631 534 aaKnown RBP8.22□□□□□ -1.09
HSP30YCR021C RPL17AP05740 184 aaKnown RBP8.07□□□□□ -1.12
HSP30YCR021C RPL17BP46990 184 aaKnown RBP8.07□□□□□ -1.12
HSP30YCR021C REB1P21538 810 aa8.03□□□□□ -1.12
HSP30YCR021C MRPL32P25348 183 aa8.02□□□□□ -1.13
HSP30YCR021C YGL015CP33199 130 aa7.67□□□□□ -1.18
HSP30YCR021C SPT21P35209 758 aa7.67□□□□□ -1.18
HSP30YCR021C SGS1P35187 1447 aa7.62□□□□□ -1.19
HSP30YCR021C YKR023WP36119 530 aaKnown RBP7.62□□□□□ -1.19
HSP30YCR021C CDC27P38042 758 aa7.62□□□□□ -1.19
HSP30YCR021C INO80P53115 1489 aa7.61□□□□□ -1.19
HSP30YCR021C MON2P48563 1636 aaPredicted RBP7.6□□□□□ -1.19
HSP30YCR021C HOP09932 586 aa7.5□□□□□ -1.21
HSP30YCR021C DCD1P06773 312 aa7.47□□□□□ -1.21
HSP30YCR021C TFC8Q12308 588 aa7.45□□□□□ -1.22
HSP30YCR021C TCB3Q03640 1545 aaKnown RBP7.43□□□□□ -1.22
HSP30YCR021C RIM101P33400 625 aa7.43□□□□□ -1.22
HSP30YCR021C TY1B-DR4Q07793 1604 aa7.41□□□□□ -1.22
HSP30YCR021C SWR1Q05471 1514 aa7.4□□□□□ -1.22
HSP30YCR021C MAP2P38174 421 aaKnown RBP7.38□□□□□ -1.23
HSP30YCR021C UBP10P53874 792 aaPredicted RBP7.37□□□□□ -1.23
HSP30YCR021C DNA2P38859 1522 aa7.3□□□□□ -1.24
HSP30YCR021C HSL1P34244 1518 aa7.27□□□□□ -1.25
HSP30YCR021C SCY1P53009 804 aa7.26□□□□□ -1.25
HSP30YCR021C SPT6P23615 1451 aaKnown RBP7.24□□□□□ -1.25
HSP30YCR021C TFA1P36100 482 aa7.23□□□□□ -1.25
HSP30YCR021C BCH2P36122 765 aa7.23□□□□□ -1.25
HSP30YCR021C OXP1P28273 1286 aa7.21□□□□□ -1.26
HSP30YCR021C SSN2P38931 1420 aa7.18□□□□□ -1.26
HSP30YCR021C SPA2P23201 1466 aaKnown RBP7.15□□□□□ -1.27
HSP30YCR021C SLX5P32828 619 aaKnown RBP7.14□□□□□ -1.27
HSP30YCR021C YIL055CP40523 627 aaKnown RBP7.13□□□□□ -1.27
HSP30YCR021C PTP3P40048 928 aa7.12□□□□□ -1.27
HSP30YCR021C HIR3P47171 1648 aa7.12□□□□□ -1.27
HSP30YCR021C KOG1P38873 1557 aa7.12□□□□□ -1.27
HSP30YCR021C TIF4632P39936 914 aaKnown RBP7.08□□□□□ -1.28
HSP30YCR021C XRN1P22147 1528 aaKnown RBP7.06□□□□□ -1.28
HSP30YCR021C TGL3P40308 642 aa7.04□□□□□ -1.28
HSP30YCR021C EPS1P40557 701 aa7.04□□□□□ -1.28
HSP30YCR021C YAH1Q12184 172 aaKnown RBP7.04□□□□□ -1.28
HSP30YCR021C BDF1P35817 686 aa7.01□□□□□ -1.29
HSP30YCR021C RSM7P47150 247 aa7□□□□□ -1.29
HSP30YCR021C BUD31P25337 157 aaPredicted RBP6.99□□□□□ -1.29
HSP30YCR021C ECM5Q03214 1411 aa6.99□□□□□ -1.29
HSP30YCR021C TAF2P23255 1407 aa6.93□□□□□ -1.3
HSP30YCR021C REV3P14284 1504 aa6.93□□□□□ -1.3
HSP30YCR021C AI2P03876 854 aa6.93□□□□□ -1.3
HSP30YCR021C BBC1P47068 1157 aa6.93□□□□□ -1.3
HSP30YCR021C BUD4P47136 1447 aa6.92□□□□□ -1.3
HSP30YCR021C YLR271WQ06152 274 aa6.89□□□□□ -1.31
HSP30YCR021C THO2P53552 1597 aaKnown RBP6.88□□□□□ -1.31
HSP30YCR021C MDS3P53094 1487 aa6.85□□□□□ -1.31
HSP30YCR021C ATG2P53855 1592 aa6.82□□□□□ -1.32
HSP30YCR021C UBP9P39967 754 aa6.82□□□□□ -1.32
HSP30YCR021C PEP1P32319 1579 aa6.82□□□□□ -1.32
HSP30YCR021C SSP1P38871 571 aa6.81□□□□□ -1.32
HSP30YCR021C SKI3P17883 1432 aaKnown RBP6.81□□□□□ -1.32
HSP30YCR021C SIN3P22579 1536 aa6.81□□□□□ -1.32
HSP30YCR021C SSK2P53599 1579 aa6.78□□□□□ -1.32
HSP30YCR021C MST1P07236 462 aa6.78□□□□□ -1.32
HSP30YCR021C NSR1P27476 414 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
HSP30YCR021C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
HSP30YCR021C PSD2P53037 1138 aaKnown RBP6.76□□□□□ -1.33
HSP30YCR021C YOR238WQ08634 303 aa6.75□□□□□ -1.33
HSP30YCR021C ESP1Q03018 1630 aa6.71□□□□□ -1.34
HSP30YCR021C SIS1P25294 352 aaKnown RBP6.7□□□□□ -1.34
HSP30YCR021C YAP5P40574 245 aa6.7□□□□□ -1.34
HSP30YCR021C MRM1P25270 412 aa6.69□□□□□ -1.34
HSP30YCR021C CST9Q06032 482 aa6.66□□□□□ -1.34
HSP30YCR021C YBL029C-AQ3E756 94 aa6.66□□□□□ -1.34
HSP30YCR021C UFD4P33202 1483 aa6.64□□□□□ -1.35
HSP30YCR021C SCC2Q04002 1493 aa6.64□□□□□ -1.35
HSP30YCR021C MGA2P40578 1113 aa6.63□□□□□ -1.35
HSP30YCR021C YPK9Q12697 1472 aa6.63□□□□□ -1.35
HSP30YCR021C BPT1P14772 1559 aa6.61□□□□□ -1.35
HSP30YCR021C PIB1Q06651 286 aa6.61□□□□□ -1.35
HSP30YCR021C WSC3Q12215 556 aa6.6□□□□□ -1.35
HSP30YCR021C MYO2P19524 1574 aaKnown RBP6.6□□□□□ -1.35
HSP30YCR021C RPO31P04051 1460 aa6.59□□□□□ -1.36
HSP30YCR021C VNX1P42839 908 aa6.58□□□□□ -1.36
HSP30YCR021C GTT3P39996 337 aa6.56□□□□□ -1.36
HSP30YCR021C STU1P38198 1513 aa6.55□□□□□ -1.36
HSP30YCR021C YCF1P39109 1515 aaKnown RBP6.55□□□□□ -1.36
HSP30YCR021C SPP1Q03012 353 aa6.54□□□□□ -1.36
HSP30YCR021C POL1P13382 1468 aa6.53□□□□□ -1.36
HSP30YCR021C RTG3P38165 486 aa6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms