RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W DRS1P32892 752 aaKnown RBP10.48□□□□□ -0.73
SIF2YBR103W MTC1P47018 478 aaKnown RBP9.67□□□□□ -0.86
SIF2YBR103W BFR2Q06631 534 aaKnown RBP9.41□□□□□ -0.9
SIF2YBR103W TFA1P36100 482 aa9.31□□□□□ -0.92
SIF2YBR103W MON2P48563 1636 aaPredicted RBP9.27□□□□□ -0.93
SIF2YBR103W INO80P53115 1489 aa9.17□□□□□ -0.94
SIF2YBR103W TCB3Q03640 1545 aaKnown RBP8.96□□□□□ -0.97
SIF2YBR103W TY1B-DR4Q07793 1604 aa8.93□□□□□ -0.98
SIF2YBR103W SGS1P35187 1447 aa8.92□□□□□ -0.98
SIF2YBR103W SWR1Q05471 1514 aa8.88□□□□□ -0.99
SIF2YBR103W RQC2Q12532 1038 aaKnown RBP8.77□□□□□ -1.01
SIF2YBR103W DNA2P38859 1522 aa8.77□□□□□ -1.01
SIF2YBR103W AVT3P36062 692 aa8.72□□□□□ -1.01
SIF2YBR103W KOG1P38873 1557 aa8.7□□□□□ -1.02
SIF2YBR103W DIP2Q12220 943 aaPredicted RBP8.66□□□□□ -1.02
SIF2YBR103W HSL1P34244 1518 aa8.63□□□□□ -1.03
SIF2YBR103W SPT6P23615 1451 aaKnown RBP8.59□□□□□ -1.03
SIF2YBR103W SPA2P23201 1466 aaKnown RBP8.48□□□□□ -1.05
SIF2YBR103W HIR3P47171 1648 aa8.45□□□□□ -1.06
SIF2YBR103W THO2P53552 1597 aaKnown RBP8.33□□□□□ -1.08
SIF2YBR103W SSN2P38931 1420 aa8.32□□□□□ -1.08
SIF2YBR103W ECM5Q03214 1411 aa8.3□□□□□ -1.08
SIF2YBR103W BUD4P47136 1447 aa8.3□□□□□ -1.08
SIF2YBR103W XRN1P22147 1528 aaKnown RBP8.29□□□□□ -1.08
SIF2YBR103W RSE1Q04693 1361 aaKnown RBP8.27□□□□□ -1.09
SIF2YBR103W MDS3P53094 1487 aa8.19□□□□□ -1.1
SIF2YBR103W PEP1P32319 1579 aa8.17□□□□□ -1.1
SIF2YBR103W REV3P14284 1504 aa8.17□□□□□ -1.1
SIF2YBR103W ATG2P53855 1592 aa8.15□□□□□ -1.1
SIF2YBR103W SIN3P22579 1536 aa8.14□□□□□ -1.11
SIF2YBR103W SSK2P53599 1579 aa8.05□□□□□ -1.12
SIF2YBR103W TAF7Q05021 590 aa8.03□□□□□ -1.12
SIF2YBR103W ESP1Q03018 1630 aa8□□□□□ -1.13
SIF2YBR103W TAF2P23255 1407 aa7.98□□□□□ -1.13
SIF2YBR103W DMA1P38823 416 aa7.97□□□□□ -1.13
SIF2YBR103W SKI3P17883 1432 aaKnown RBP7.96□□□□□ -1.14
SIF2YBR103W BPT1P14772 1559 aa7.96□□□□□ -1.14
SIF2YBR103W MYO2P19524 1574 aaKnown RBP7.91□□□□□ -1.14
SIF2YBR103W YPK9Q12697 1472 aa7.9□□□□□ -1.14
SIF2YBR103W SCC2Q04002 1493 aa7.86□□□□□ -1.15
SIF2YBR103W UFD4P33202 1483 aa7.85□□□□□ -1.15
SIF2YBR103W YCF1P39109 1515 aaKnown RBP7.84□□□□□ -1.15
SIF2YBR103W RPO31P04051 1460 aa7.83□□□□□ -1.16
SIF2YBR103W TY2B-LR1P0C2J3 1770 aa7.78□□□□□ -1.16
SIF2YBR103W TY2B-FP0CX63 1770 aa7.78□□□□□ -1.16
SIF2YBR103W TY2B-GR2P0CX64 1770 aa7.78□□□□□ -1.16
SIF2YBR103W TY2B-CP25384 1770 aa7.78□□□□□ -1.16
SIF2YBR103W TY2B-DR2Q03494 1770 aa7.78□□□□□ -1.16
SIF2YBR103W TY1B-DR1Q03855 1755 aa7.78□□□□□ -1.16
SIF2YBR103W TY2B-DR3Q07791 1770 aaKnown RBP7.78□□□□□ -1.16
SIF2YBR103W TY2B-OR1Q12113 1770 aa7.78□□□□□ -1.16
SIF2YBR103W TY2B-DR1Q12472 1770 aa7.78□□□□□ -1.16
SIF2YBR103W TY2B-OR2Q12501 1770 aa7.78□□□□□ -1.16
SIF2YBR103W ISW2Q08773 1120 aa7.74□□□□□ -1.17
SIF2YBR103W TY1B-BRQ12193 1756 aa7.73□□□□□ -1.17
SIF2YBR103W TY1B-GR3Q12316 1755 aa7.73□□□□□ -1.17
SIF2YBR103W TY1B-ORQ92393 1755 aa7.73□□□□□ -1.17
SIF2YBR103W CHD1P32657 1468 aa7.72□□□□□ -1.17
SIF2YBR103W CDC25P04821 1589 aa7.72□□□□□ -1.17
SIF2YBR103W TOP2P06786 1428 aaKnown RBP7.72□□□□□ -1.17
SIF2YBR103W POL1P13382 1468 aa7.7□□□□□ -1.18
SIF2YBR103W PTP3P40048 928 aa7.69□□□□□ -1.18
SIF2YBR103W TY2B-BQ12491 1770 aa7.69□□□□□ -1.18
SIF2YBR103W TY1B-DR3Q99231 1755 aa7.68□□□□□ -1.18
SIF2YBR103W RKR1Q04781 1562 aa7.68□□□□□ -1.18
SIF2YBR103W TY1B-HO13535 1793 aa7.67□□□□□ -1.18
SIF2YBR103W TY1B-DR5P0C2I2 1755 aa7.67□□□□□ -1.18
SIF2YBR103W TY1B-DR6P0C2I3 1755 aa7.67□□□□□ -1.18
SIF2YBR103W TY1B-LR2P0C2I5 1755 aa7.67□□□□□ -1.18
SIF2YBR103W TY1B-LR3P0C2I6 1755 aaKnown RBP7.67□□□□□ -1.18
SIF2YBR103W TY1B-PR1P0C2I9 1755 aaKnown RBP7.67□□□□□ -1.18
SIF2YBR103W TY1B-PR2P0C2J0 1756 aa7.67□□□□□ -1.18
SIF2YBR103W TY1B-PR3P0C2J1 1755 aaKnown RBP7.67□□□□□ -1.18
SIF2YBR103W TY1B-JR1P47098 1755 aa7.67□□□□□ -1.18
SIF2YBR103W TY1B-ML2Q03434 1755 aaKnown RBP7.67□□□□□ -1.18
SIF2YBR103W TY1B-ER1Q03612 1755 aa7.67□□□□□ -1.18
SIF2YBR103W TY1B-ML1Q04711 1755 aaKnown RBP7.67□□□□□ -1.18
SIF2YBR103W TY1B-GR2Q12269 1755 aa7.67□□□□□ -1.18
SIF2YBR103W TY1B-OLQ12273 1755 aa7.67□□□□□ -1.18
SIF2YBR103W TY1B-PLQ12414 1755 aaKnown RBP7.67□□□□□ -1.18
SIF2YBR103W DNF1P32660 1571 aa7.65□□□□□ -1.18
SIF2YBR103W ESC1Q03661 1658 aaKnown RBP7.65□□□□□ -1.18
SIF2YBR103W PAN1P32521 1480 aa7.65□□□□□ -1.18
SIF2YBR103W LEO1P38439 464 aa7.65□□□□□ -1.18
SIF2YBR103W RPL17AP05740 184 aaKnown RBP7.64□□□□□ -1.19
SIF2YBR103W RPL17BP46990 184 aaKnown RBP7.64□□□□□ -1.19
SIF2YBR103W MET5P47169 1442 aa7.62□□□□□ -1.19
SIF2YBR103W SMC4Q12267 1418 aa7.62□□□□□ -1.19
SIF2YBR103W YOR1P53049 1477 aa7.62□□□□□ -1.19
SIF2YBR103W STU1P38198 1513 aa7.61□□□□□ -1.19
SIF2YBR103W RPA190P10964 1664 aaKnown RBP7.61□□□□□ -1.19
SIF2YBR103W MMS22Q06164 1454 aa7.6□□□□□ -1.19
SIF2YBR103W RPG1P38249 964 aaKnown RBP7.6□□□□□ -1.19
SIF2YBR103W SPP41P38904 1435 aa7.53□□□□□ -1.2
SIF2YBR103W TY1B-JR2P47100 1755 aaKnown RBP7.52□□□□□ -1.2
SIF2YBR103W TY1B-ER2Q03619 1755 aa7.52□□□□□ -1.2
SIF2YBR103W TY1B-MR1Q04214 1755 aa7.52□□□□□ -1.2
SIF2YBR103W TY1B-MR2Q04670 1755 aaKnown RBP7.52□□□□□ -1.2
SIF2YBR103W TY1B-LR1Q12088 1755 aaKnown RBP7.52□□□□□ -1.2
SIF2YBR103W TY1B-NL1Q12112 1755 aa7.52□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms