RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene SPO7, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO7YAL009W MTC1P47018 478 aaKnown RBP15.59■□□□□ 0.09
SPO7YAL009W DRS1P32892 752 aaKnown RBP14.66□□□□□ -0.06
SPO7YAL009W FAP1P53971 965 aa14□□□□□ -0.17
SPO7YAL009W PRY3P47033 881 aa13.17□□□□□ -0.3
SPO7YAL009W PRI1P10363 409 aa13.11□□□□□ -0.31
SPO7YAL009W AAD16Q02895 342 aa13.01□□□□□ -0.33
SPO7YAL009W ISW2Q08773 1120 aa12.86□□□□□ -0.35
SPO7YAL009W DIP2Q12220 943 aaPredicted RBP12.82□□□□□ -0.36
SPO7YAL009W RPG1P38249 964 aaKnown RBP12.81□□□□□ -0.36
SPO7YAL009W YCK3P39962 524 aa12.52□□□□□ -0.41
SPO7YAL009W TSR3Q12094 313 aaKnown RBP12.47□□□□□ -0.41
SPO7YAL009W AVT3P36062 692 aa12.37□□□□□ -0.43
SPO7YAL009W RSE1Q04693 1361 aaKnown RBP12.34□□□□□ -0.43
SPO7YAL009W HAA1Q12753 694 aaKnown RBP12.25□□□□□ -0.45
SPO7YAL009W BFR2Q06631 534 aaKnown RBP12.2□□□□□ -0.46
SPO7YAL009W RPL17AP05740 184 aaKnown RBP12.01□□□□□ -0.49
SPO7YAL009W RPL17BP46990 184 aaKnown RBP12.01□□□□□ -0.49
SPO7YAL009W INO80P53115 1489 aa12.01□□□□□ -0.49
SPO7YAL009W MON2P48563 1636 aaPredicted RBP11.93□□□□□ -0.5
SPO7YAL009W REB1P21538 810 aa11.9□□□□□ -0.5
SPO7YAL009W MRPL32P25348 183 aa11.88□□□□□ -0.51
SPO7YAL009W SPT21P35209 758 aa11.47□□□□□ -0.57
SPO7YAL009W SWR1Q05471 1514 aa11.45□□□□□ -0.58
SPO7YAL009W DNA2P38859 1522 aa11.45□□□□□ -0.58
SPO7YAL009W TCB3Q03640 1545 aaKnown RBP11.42□□□□□ -0.58
SPO7YAL009W SGS1P35187 1447 aa11.42□□□□□ -0.58
SPO7YAL009W CDC27P38042 758 aa11.4□□□□□ -0.58
SPO7YAL009W YKR023WP36119 530 aaKnown RBP11.37□□□□□ -0.59
SPO7YAL009W YGL015CP33199 130 aa11.34□□□□□ -0.59
SPO7YAL009W TY1B-DR4Q07793 1604 aa11.33□□□□□ -0.6
SPO7YAL009W KOG1P38873 1557 aa11.2□□□□□ -0.62
SPO7YAL009W HOP09932 586 aa11.17□□□□□ -0.62
SPO7YAL009W DCD1P06773 312 aa11.16□□□□□ -0.62
SPO7YAL009W TFC8Q12308 588 aa11.1□□□□□ -0.63
SPO7YAL009W RIM101P33400 625 aa11.07□□□□□ -0.64
SPO7YAL009W MAP2P38174 421 aaKnown RBP11.02□□□□□ -0.65
SPO7YAL009W SPT6P23615 1451 aaKnown RBP11.01□□□□□ -0.65
SPO7YAL009W HSL1P34244 1518 aa11.01□□□□□ -0.65
SPO7YAL009W UBP10P53874 792 aaPredicted RBP10.91□□□□□ -0.66
SPO7YAL009W SPA2P23201 1466 aaKnown RBP10.89□□□□□ -0.67
SPO7YAL009W ECM5Q03214 1411 aa10.81□□□□□ -0.68
SPO7YAL009W SCY1P53009 804 aa10.8□□□□□ -0.68
SPO7YAL009W HIR3P47171 1648 aa10.78□□□□□ -0.68
SPO7YAL009W OXP1P28273 1286 aa10.77□□□□□ -0.69
SPO7YAL009W BCH2P36122 765 aa10.76□□□□□ -0.69
SPO7YAL009W TFA1P36100 482 aa10.73□□□□□ -0.69
SPO7YAL009W BUD4P47136 1447 aa10.67□□□□□ -0.7
SPO7YAL009W XRN1P22147 1528 aaKnown RBP10.63□□□□□ -0.71
SPO7YAL009W THO2P53552 1597 aaKnown RBP10.6□□□□□ -0.71
SPO7YAL009W SLX5P32828 619 aaKnown RBP10.59□□□□□ -0.71
SPO7YAL009W SSN2P38931 1420 aa10.55□□□□□ -0.72
SPO7YAL009W PTP3P40048 928 aa10.54□□□□□ -0.72
SPO7YAL009W MDS3P53094 1487 aa10.54□□□□□ -0.72
SPO7YAL009W YIL055CP40523 627 aaKnown RBP10.52□□□□□ -0.73
SPO7YAL009W EPS1P40557 701 aa10.49□□□□□ -0.73
SPO7YAL009W YAH1Q12184 172 aaKnown RBP10.48□□□□□ -0.73
SPO7YAL009W TIF4632P39936 914 aaKnown RBP10.45□□□□□ -0.74
SPO7YAL009W PEP1P32319 1579 aa10.44□□□□□ -0.74
SPO7YAL009W BDF1P35817 686 aa10.44□□□□□ -0.74
SPO7YAL009W TGL3P40308 642 aa10.43□□□□□ -0.74
SPO7YAL009W REV3P14284 1504 aa10.4□□□□□ -0.74
SPO7YAL009W BUD31P25337 157 aaPredicted RBP10.38□□□□□ -0.75
SPO7YAL009W RSM7P47150 247 aa10.38□□□□□ -0.75
SPO7YAL009W TAF2P23255 1407 aa10.38□□□□□ -0.75
SPO7YAL009W ATG2P53855 1592 aa10.36□□□□□ -0.75
SPO7YAL009W SKI3P17883 1432 aaKnown RBP10.32□□□□□ -0.76
SPO7YAL009W AI2P03876 854 aa10.3□□□□□ -0.76
SPO7YAL009W YLR271WQ06152 274 aa10.26□□□□□ -0.77
SPO7YAL009W SIN3P22579 1536 aa10.24□□□□□ -0.77
SPO7YAL009W BPT1P14772 1559 aa10.23□□□□□ -0.77
SPO7YAL009W BBC1P47068 1157 aa10.23□□□□□ -0.77
SPO7YAL009W SSK2P53599 1579 aa10.17□□□□□ -0.78
SPO7YAL009W UFD4P33202 1483 aa10.1□□□□□ -0.79
SPO7YAL009W SSP1P38871 571 aa10.1□□□□□ -0.79
SPO7YAL009W ESP1Q03018 1630 aa10.07□□□□□ -0.8
SPO7YAL009W PSD2P53037 1138 aaKnown RBP10.06□□□□□ -0.8
SPO7YAL009W YCF1P39109 1515 aaKnown RBP10.06□□□□□ -0.8
SPO7YAL009W UBP9P39967 754 aa10.05□□□□□ -0.8
SPO7YAL009W SCC2Q04002 1493 aa10.03□□□□□ -0.8
SPO7YAL009W YPK9Q12697 1472 aa10.03□□□□□ -0.8
SPO7YAL009W MST1P07236 462 aa9.99□□□□□ -0.81
SPO7YAL009W YOR238WQ08634 303 aa9.99□□□□□ -0.81
SPO7YAL009W RPO31P04051 1460 aa9.98□□□□□ -0.81
SPO7YAL009W MRM1P25270 412 aa9.96□□□□□ -0.82
SPO7YAL009W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
SPO7YAL009W CST9Q06032 482 aa9.94□□□□□ -0.82
SPO7YAL009W MYO2P19524 1574 aaKnown RBP9.92□□□□□ -0.82
SPO7YAL009W CHD1P32657 1468 aa9.92□□□□□ -0.82
SPO7YAL009W NSR1P27476 414 aaKnown RBP RIP-Chip data9.92□□□□□ -0.82not detected
SPO7YAL009W YAP5P40574 245 aa9.92□□□□□ -0.82
SPO7YAL009W RQC2Q12532 1038 aaKnown RBP9.92□□□□□ -0.82
SPO7YAL009W YBL029C-AQ3E756 94 aa9.92□□□□□ -0.82
SPO7YAL009W SIS1P25294 352 aaKnown RBP9.91□□□□□ -0.82
SPO7YAL009W PIB1Q06651 286 aa9.87□□□□□ -0.83
SPO7YAL009W DNF1P32660 1571 aa9.85□□□□□ -0.83
SPO7YAL009W CDC25P04821 1589 aa9.84□□□□□ -0.83
SPO7YAL009W TOP2P06786 1428 aaKnown RBP9.82□□□□□ -0.84
SPO7YAL009W MGA2P40578 1113 aa9.82□□□□□ -0.84
SPO7YAL009W WSC3Q12215 556 aa9.81□□□□□ -0.84
SPO7YAL009W PAN1P32521 1480 aa9.8□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms