RNA–Protein interactions for RNA: ENST00000579180.2

MSI2-206, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MSI2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-206ENST00000579180 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
MSI2-206ENST00000579180 CHMP7Q8WUX9 453 aaPredicted RBP24.93■■□□□ 1.58
MSI2-206ENST00000579180 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
MSI2-206ENST00000579180 IQGAP2Q13576 1575 aa24.89■■□□□ 1.58
MSI2-206ENST00000579180 CEP170Q5SW79 1584 aa24.89■■□□□ 1.57
MSI2-206ENST00000579180 EFCAB5A4FU69 1503 aa24.88■■□□□ 1.57
MSI2-206ENST00000579180 CHD1O14646 1710 aa24.88■■□□□ 1.57
MSI2-206ENST00000579180 VPS8Q8N3P4 1428 aa24.87■■□□□ 1.57
MSI2-206ENST00000579180 KIAA0586Q9BVV6 1533 aa24.86■■□□□ 1.57
MSI2-206ENST00000579180 NUP160Q12769 1436 aa24.85■■□□□ 1.57
MSI2-206ENST00000579180 FBLN2P98095 1184 aa24.85■■□□□ 1.57
MSI2-206ENST00000579180 SAMD9Q5K651 1589 aa24.85■■□□□ 1.57
MSI2-206ENST00000579180 UGGT2Q9NYU1 1516 aa24.78■■□□□ 1.56
MSI2-206ENST00000579180 FHOD3Q2V2M9 1422 aa24.73■■□□□ 1.55
MSI2-206ENST00000579180 P3H3Q8IVL6 736 aa24.72■■□□□ 1.55
MSI2-206ENST00000579180 DISP1Q96F81 1524 aa24.67■■□□□ 1.54
MSI2-206ENST00000579180 KIAA0556O60303 1618 aa24.66■■□□□ 1.54
MSI2-206ENST00000579180 FMN1Q68DA7 1419 aa24.62■■□□□ 1.53
MSI2-206ENST00000579180 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
MSI2-206ENST00000579180 PCF11O94913 1555 aaKnown RBP24.61■■□□□ 1.53
MSI2-206ENST00000579180 SHROOM2Q13796 1616 aa24.59■■□□□ 1.53
MSI2-206ENST00000579180 CLASP1Q7Z460 1538 aa24.58■■□□□ 1.53
MSI2-206ENST00000579180 PPARGC1BQ86YN6 1023 aaKnown RBP24.57■■□□□ 1.52
MSI2-206ENST00000579180 CASKIN1Q8WXD9 1431 aa24.56■■□□□ 1.52
MSI2-206ENST00000579180 FYCO1Q9BQS8 1478 aa24.56■■□□□ 1.52
MSI2-206ENST00000579180 APLP2Q06481 763 aa24.53■■□□□ 1.52
MSI2-206ENST00000579180 CARMIL2Q6F5E8 1435 aa24.53■■□□□ 1.52
MSI2-206ENST00000579180 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
MSI2-206ENST00000579180 TIAM1Q13009 1591 aa24.49■■□□□ 1.51
MSI2-206ENST00000579180 CFAP43Q8NDM7 1665 aa24.48■■□□□ 1.51
MSI2-206ENST00000579180 PRG4Q92954 1404 aaPredicted RBP24.48■■□□□ 1.51
MSI2-206ENST00000579180 LRRIQ1Q96JM4 1722 aa24.48■■□□□ 1.51
MSI2-206ENST00000579180 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.5
MSI2-206ENST00000579180 HECW1Q76N89 1606 aa24.42■■□□□ 1.5
MSI2-206ENST00000579180 KANK4Q5T7N3 995 aaPredicted RBP24.41■■□□□ 1.5
MSI2-206ENST00000579180 TTBK1Q5TCY1 1321 aaPredicted RBP24.39■■□□□ 1.5
MSI2-206ENST00000579180 ATP1B4Q9UN42 357 aaPredicted RBP24.39■■□□□ 1.5
MSI2-206ENST00000579180 RAPGEF6Q8TEU7 1601 aa24.39■■□□□ 1.5
MSI2-206ENST00000579180 ERCC6L2Q5T890 1561 aa24.39■■□□□ 1.5
MSI2-206ENST00000579180 LRRC9Q6ZRR7 1453 aa24.36■■□□□ 1.49
MSI2-206ENST00000579180 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
MSI2-206ENST00000579180 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
MSI2-206ENST00000579180 CCDC18Q5T9S5 1454 aa24.33■■□□□ 1.49
MSI2-206ENST00000579180 EPRSP07814 1512 aaKnown RBP24.32■■□□□ 1.48
MSI2-206ENST00000579180 PLB1Q6P1J6 1458 aa24.32■■□□□ 1.48
MSI2-206ENST00000579180 ABCA8O94911 1581 aa24.32■■□□□ 1.48
MSI2-206ENST00000579180 NUP153P49790 1475 aaKnown RBP24.31■■□□□ 1.48
MSI2-206ENST00000579180 PTPRGP23470 1445 aa24.3■■□□□ 1.48
MSI2-206ENST00000579180 CDK13Q14004 1512 aaKnown RBP24.25■■□□□ 1.47
MSI2-206ENST00000579180 MAGI3Q5TCQ9 1506 aa24.22■■□□□ 1.47
MSI2-206ENST00000579180 EHBP1L1Q8N3D4 1523 aa24.2■■□□□ 1.46
MSI2-206ENST00000579180 UACAQ9BZF9 1416 aa24.18■■□□□ 1.46
MSI2-206ENST00000579180 MTUS2Q5JR59 1369 aa24.18■■□□□ 1.46
MSI2-206ENST00000579180 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
MSI2-206ENST00000579180 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
MSI2-206ENST00000579180 ABCC2Q92887 1545 aa24.13■■□□□ 1.45
MSI2-206ENST00000579180 ATP10BO94823 1461 aa24.13■■□□□ 1.45
MSI2-206ENST00000579180 RRBP1Q9P2E9 1410 aaKnown RBP24.11■■□□□ 1.45
MSI2-206ENST00000579180 PHLDB1Q86UU1 1377 aa24.1■■□□□ 1.45
MSI2-206ENST00000579180 UHRF1BP1LA0JNW5 1464 aa24.1■■□□□ 1.45
MSI2-206ENST00000579180 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
MSI2-206ENST00000579180 NCOA2Q15596 1464 aa24.08■■□□□ 1.45
MSI2-206ENST00000579180 CDK11AQ9UQ88 783 aaPredicted RBP24.06■■□□□ 1.44
MSI2-206ENST00000579180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
MSI2-206ENST00000579180 HNRNPUL2Q1KMD3 747 aaKnown RBP24.06■■□□□ 1.44
MSI2-206ENST00000579180 TROQ12816 1431 aaPredicted RBP24.04■■□□□ 1.44
MSI2-206ENST00000579180 ADCY10Q96PN6 1610 aa24.03■■□□□ 1.44
MSI2-206ENST00000579180 CCNB3Q8WWL7 1395 aa24.02■■□□□ 1.44
MSI2-206ENST00000579180 KDM5BQ9UGL1 1544 aa24■■□□□ 1.43
MSI2-206ENST00000579180 ZCCHC11Q5TAX3 1644 aaKnown RBP23.99■■□□□ 1.43
MSI2-206ENST00000579180 MYOM3Q5VTT5 1437 aa23.97■■□□□ 1.43
MSI2-206ENST00000579180 KIF14Q15058 1648 aa23.97■■□□□ 1.43
MSI2-206ENST00000579180 PLEKHD1A6NEE1 506 aa23.96■■□□□ 1.43
MSI2-206ENST00000579180 FGD6Q6ZV73 1430 aa23.95■■□□□ 1.43
MSI2-206ENST00000579180 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
MSI2-206ENST00000579180 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
MSI2-206ENST00000579180 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
MSI2-206ENST00000579180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.425e-6■■■□□ 14.8
MSI2-206ENST00000579180 PTPN23Q9H3S7 1636 aa23.88■■□□□ 1.41
MSI2-206ENST00000579180 ABCC10Q5T3U5 1492 aa23.87■■□□□ 1.41
MSI2-206ENST00000579180 ITSN2Q9NZM3 1697 aa23.87■■□□□ 1.41
MSI2-206ENST00000579180 MIA2Q96PC5 1412 aa23.86■■□□□ 1.41
MSI2-206ENST00000579180 CDC42BPAQ5VT25 1732 aa23.84■■□□□ 1.41
MSI2-206ENST00000579180 TCOF1Q13428 1488 aaKnown RBP23.84■■□□□ 1.41
MSI2-206ENST00000579180 FAM50AQ14320 339 aaKnown RBP23.83■■□□□ 1.41
MSI2-206ENST00000579180 GPATCH8Q9UKJ3 1502 aaKnown RBP23.83■■□□□ 1.4
MSI2-206ENST00000579180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.77■■□□□ 1.4
MSI2-206ENST00000579180 TTC37Q6PGP7 1564 aa23.76■■□□□ 1.39
MSI2-206ENST00000579180 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
MSI2-206ENST00000579180 PREX2Q70Z35 1606 aa23.74■■□□□ 1.39
MSI2-206ENST00000579180 CDC42BPBQ9Y5S2 1711 aa23.74■■□□□ 1.39
MSI2-206ENST00000579180 ITGAEP38570 1179 aa23.73■■□□□ 1.39
MSI2-206ENST00000579180 MYO5CQ9NQX4 1742 aa23.72■■□□□ 1.39
MSI2-206ENST00000579180 ASXL2Q76L83 1435 aa23.71■■□□□ 1.39
MSI2-206ENST00000579180 CYB5RLQ6IPT4 315 aa23.71■■□□□ 1.39
MSI2-206ENST00000579180 CFDP1Q9UEE9 299 aaPredicted RBP23.71■■□□□ 1.39
MSI2-206ENST00000579180 NPM1P06748 294 aaKnown RBP eCLIP23.7■■□□□ 1.39
MSI2-206ENST00000579180 KCNH8Q96L42 1107 aa23.7■■□□□ 1.38
MSI2-206ENST00000579180 CAMSAP2Q08AD1 1489 aa23.68■■□□□ 1.38
MSI2-206ENST00000579180 PTPRKQ15262 1439 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms