RNA–Protein interactions for RNA: ENST00000515267.2

RFPL4AP3-201, Transcript of ret finger protein like 4A pseudogene 3, humanhuman

BASIC

Gene RFPL4AP3, Length 345 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AP3-201ENST00000515267 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
RFPL4AP3-201ENST00000515267 AEBP2Q6ZN18 517 aaPredicted RBP14.69□□□□□ -0.06
RFPL4AP3-201ENST00000515267 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
RFPL4AP3-201ENST00000515267 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
RFPL4AP3-201ENST00000515267 PLPPR3Q6T4P5 718 aa13.13□□□□□ -0.31
RFPL4AP3-201ENST00000515267 SLC24A1O60721 1099 aa12.96□□□□□ -0.33
RFPL4AP3-201ENST00000515267 KCNA4P22459 653 aa12.63□□□□□ -0.39
RFPL4AP3-201ENST00000515267 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
RFPL4AP3-201ENST00000515267 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
RFPL4AP3-201ENST00000515267 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
RFPL4AP3-201ENST00000515267 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
RFPL4AP3-201ENST00000515267 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
RFPL4AP3-201ENST00000515267 ADRA2BP18089 450 aa12.11□□□□□ -0.47
RFPL4AP3-201ENST00000515267 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
RFPL4AP3-201ENST00000515267 PPP6R1Q9UPN7 881 aa11.67□□□□□ -0.54
RFPL4AP3-201ENST00000515267 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
RFPL4AP3-201ENST00000515267 ZBTB22O15209 634 aa11.61□□□□□ -0.55
RFPL4AP3-201ENST00000515267 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
RFPL4AP3-201ENST00000515267 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
RFPL4AP3-201ENST00000515267 FOXD1Q16676 465 aa11.29□□□□□ -0.6
RFPL4AP3-201ENST00000515267 BCANQ96GW7 911 aa11.27□□□□□ -0.61
RFPL4AP3-201ENST00000515267 FKBP8Q14318 412 aa11.25□□□□□ -0.61
RFPL4AP3-201ENST00000515267 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
RFPL4AP3-201ENST00000515267 DAXXQ9UER7 740 aaPredicted RBP11.19□□□□□ -0.62
RFPL4AP3-201ENST00000515267 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
RFPL4AP3-201ENST00000515267 TAOK2Q9UL54 1235 aa11.15□□□□□ -0.62
RFPL4AP3-201ENST00000515267 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
RFPL4AP3-201ENST00000515267 DNAJC5BQ9UF47 199 aa11.08□□□□□ -0.64
RFPL4AP3-201ENST00000515267 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
RFPL4AP3-201ENST00000515267 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
RFPL4AP3-201ENST00000515267 ARXQ96QS3 562 aa10.98□□□□□ -0.65
RFPL4AP3-201ENST00000515267 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
RFPL4AP3-201ENST00000515267 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
RFPL4AP3-201ENST00000515267 ATXN8OSP0DMR3 200 aa10.91□□□□□ -0.66
RFPL4AP3-201ENST00000515267 SCAF1Q9H7N4 1312 aaKnown RBP10.89□□□□□ -0.67
RFPL4AP3-201ENST00000515267 ERICH6Q7L0X2 663 aa10.82□□□□□ -0.68
RFPL4AP3-201ENST00000515267 TIMELESSQ9UNS1 1208 aa10.82□□□□□ -0.68
RFPL4AP3-201ENST00000515267 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
RFPL4AP3-201ENST00000515267 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
RFPL4AP3-201ENST00000515267 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
RFPL4AP3-201ENST00000515267 HOMEZQ8IX15 550 aa10.68□□□□□ -0.7
RFPL4AP3-201ENST00000515267 RNF216Q9NWF9 866 aaPredicted RBP10.63□□□□□ -0.71
RFPL4AP3-201ENST00000515267 FBXO3Q9UK99 471 aa10.63□□□□□ -0.71
RFPL4AP3-201ENST00000515267 GTF3C3Q9Y5Q9 886 aa10.63□□□□□ -0.71
RFPL4AP3-201ENST00000515267 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
RFPL4AP3-201ENST00000515267 SLC4A2P04920 1241 aa10.56□□□□□ -0.72
RFPL4AP3-201ENST00000515267 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
RFPL4AP3-201ENST00000515267 BBXQ8WY36 941 aaPredicted RBP10.48□□□□□ -0.73
RFPL4AP3-201ENST00000515267 FBLN2P98095 1184 aa10.47□□□□□ -0.73
RFPL4AP3-201ENST00000515267 RANGAP1P46060 587 aaPredicted RBP10.46□□□□□ -0.73
RFPL4AP3-201ENST00000515267 NBR1Q14596 966 aa10.42□□□□□ -0.74
RFPL4AP3-201ENST00000515267 TMEM132AQ24JP5 1023 aa10.42□□□□□ -0.74
RFPL4AP3-201ENST00000515267 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
RFPL4AP3-201ENST00000515267 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
RFPL4AP3-201ENST00000515267 PKD2Q13563 968 aa10.37□□□□□ -0.75
RFPL4AP3-201ENST00000515267 C14orf37Q86TY3 774 aa10.37□□□□□ -0.75
RFPL4AP3-201ENST00000515267 CFAP44Q96MT7 982 aa10.37□□□□□ -0.75
RFPL4AP3-201ENST00000515267 MAPK8IP2Q13387 824 aaPredicted RBP10.3□□□□□ -0.76
RFPL4AP3-201ENST00000515267 HOXD11P31277 338 aaPredicted RBP10.28□□□□□ -0.76
RFPL4AP3-201ENST00000515267 IFNLR1Q8IU57 520 aaPredicted RBP10.28□□□□□ -0.76
RFPL4AP3-201ENST00000515267 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
RFPL4AP3-201ENST00000515267 TSHZ2Q9NRE2 1034 aa10.24□□□□□ -0.77
RFPL4AP3-201ENST00000515267 PODXL2Q9NZ53 605 aa10.21□□□□□ -0.77
RFPL4AP3-201ENST00000515267 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
RFPL4AP3-201ENST00000515267 NPM1P06748 294 aaKnown RBP eCLIP10.2□□□□□ -0.78
RFPL4AP3-201ENST00000515267 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
RFPL4AP3-201ENST00000515267 PROM2Q8N271 834 aa10.19□□□□□ -0.78
RFPL4AP3-201ENST00000515267 ATF5Q9Y2D1 282 aaPredicted RBP10.17□□□□□ -0.78
RFPL4AP3-201ENST00000515267 ECM2O94769 699 aaPredicted RBP10.16□□□□□ -0.78
RFPL4AP3-201ENST00000515267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
RFPL4AP3-201ENST00000515267 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
RFPL4AP3-201ENST00000515267 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
RFPL4AP3-201ENST00000515267 MSH5O43196 834 aa10.08□□□□□ -0.8
RFPL4AP3-201ENST00000515267 DMRT2Q9Y5R5 561 aa10.06□□□□□ -0.8
RFPL4AP3-201ENST00000515267 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
RFPL4AP3-201ENST00000515267 RGL2O15211 777 aa9.98□□□□□ -0.81
RFPL4AP3-201ENST00000515267 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
RFPL4AP3-201ENST00000515267 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
RFPL4AP3-201ENST00000515267 NPM2Q86SE8 214 aaKnown RBP9.95□□□□□ -0.82
RFPL4AP3-201ENST00000515267 ZNF219Q9P2Y4 722 aaPredicted RBP9.95□□□□□ -0.82
RFPL4AP3-201ENST00000515267 CHGAP10645 457 aaKnown RBP9.94□□□□□ -0.82
RFPL4AP3-201ENST00000515267 HS6ST3Q8IZP7 471 aa9.83□□□□□ -0.84
RFPL4AP3-201ENST00000515267 TRIM26Q12899 539 aaPredicted RBP9.82□□□□□ -0.84
RFPL4AP3-201ENST00000515267 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
RFPL4AP3-201ENST00000515267 UBTFP17480 764 aaKnown RBP9.81□□□□□ -0.84
RFPL4AP3-201ENST00000515267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFPL4AP3-201ENST00000515267 BRPF1P55201 1214 aaPredicted RBP9.8□□□□□ -0.84
RFPL4AP3-201ENST00000515267 APLP2Q06481 763 aa9.79□□□□□ -0.84
RFPL4AP3-201ENST00000515267 P3H3Q8IVL6 736 aa9.77□□□□□ -0.85
RFPL4AP3-201ENST00000515267 U3KPZ7 1027 aaPredicted RBP9.75□□□□□ -0.85
RFPL4AP3-201ENST00000515267 TRIM41Q8WV44 630 aa9.74□□□□□ -0.85
RFPL4AP3-201ENST00000515267 LMOD2Q6P5Q4 547 aa9.72□□□□□ -0.85
RFPL4AP3-201ENST00000515267 STAG3Q9UJ98 1225 aa9.7□□□□□ -0.86
RFPL4AP3-201ENST00000515267 NEUROD2Q15784 382 aa9.68□□□□□ -0.86
RFPL4AP3-201ENST00000515267 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
RFPL4AP3-201ENST00000515267 CIZ1Q9ULV3 898 aaPredicted RBP9.67□□□□□ -0.86
RFPL4AP3-201ENST00000515267 HRCP23327 699 aa9.66□□□□□ -0.86
RFPL4AP3-201ENST00000515267 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
RFPL4AP3-201ENST00000515267 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
RFPL4AP3-201ENST00000515267 CCDC9Q9Y3X0 531 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms