RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 CHD1O14646 1710 aa21.65■■□□□ 1.06
LETM1-204ENST00000510940 CTTNBP2Q8WZ74 1663 aa21.65■■□□□ 1.06
LETM1-204ENST00000510940 NUP160Q12769 1436 aa21.61■■□□□ 1.05
LETM1-204ENST00000510940 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
LETM1-204ENST00000510940 IQGAP2Q13576 1575 aa21.55■■□□□ 1.04
LETM1-204ENST00000510940 CEP170Q5SW79 1584 aa21.55■■□□□ 1.04
LETM1-204ENST00000510940 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
LETM1-204ENST00000510940 CLIP1P30622 1438 aa21.48■■□□□ 1.03
LETM1-204ENST00000510940 EFCAB5A4FU69 1503 aa21.47■■□□□ 1.03
LETM1-204ENST00000510940 UGGT2Q9NYU1 1516 aa21.45■■□□□ 1.02
LETM1-204ENST00000510940 JPH4Q96JJ6 628 aa21.43■■□□□ 1.02
LETM1-204ENST00000510940 CLASP1Q7Z460 1538 aa21.42■■□□□ 1.02
LETM1-204ENST00000510940 RANGAP1P46060 587 aaPredicted RBP21.41■■□□□ 1.02
LETM1-204ENST00000510940 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
LETM1-204ENST00000510940 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
LETM1-204ENST00000510940 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
LETM1-204ENST00000510940 ARHGAP35Q9NRY4 1499 aa21.35■■□□□ 1.01
LETM1-204ENST00000510940 PRG4Q92954 1404 aaPredicted RBP21.3■■□□□ 1
LETM1-204ENST00000510940 KIAA0556O60303 1618 aa21.3■■□□□ 1
LETM1-204ENST00000510940 DISP1Q96F81 1524 aa21.29■■□□□ 1
LETM1-204ENST00000510940 FMN1Q68DA7 1419 aa21.29■■□□□ 1
LETM1-204ENST00000510940 P3H3Q8IVL6 736 aa21.26■□□□□ 0.99
LETM1-204ENST00000510940 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
LETM1-204ENST00000510940 FHOD3Q2V2M9 1422 aa21.25■□□□□ 0.99
LETM1-204ENST00000510940 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
LETM1-204ENST00000510940 ARHGEF11O15085 1522 aa21.2■□□□□ 0.98
LETM1-204ENST00000510940 PTPRGP23470 1445 aa21.17■□□□□ 0.98
LETM1-204ENST00000510940 APLP2Q06481 763 aa21.14■□□□□ 0.97
LETM1-204ENST00000510940 FYCO1Q9BQS8 1478 aa21.13■□□□□ 0.97
LETM1-204ENST00000510940 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
LETM1-204ENST00000510940 RIMBP3CA6NJZ7 1639 aa21.12■□□□□ 0.97
LETM1-204ENST00000510940 RIMBP3BA6NNM3 1639 aa21.12■□□□□ 0.97
LETM1-204ENST00000510940 RIMBP3Q9UFD9 1639 aa21.12■□□□□ 0.97
LETM1-204ENST00000510940 CYB5RLQ6IPT4 315 aa21.11■□□□□ 0.97
LETM1-204ENST00000510940 ERCC6L2Q5T890 1561 aa21.1■□□□□ 0.97
LETM1-204ENST00000510940 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
LETM1-204ENST00000510940 HECW1Q76N89 1606 aa21.07■□□□□ 0.96
LETM1-204ENST00000510940 RAPGEF6Q8TEU7 1601 aa21.07■□□□□ 0.96
LETM1-204ENST00000510940 PCF11O94913 1555 aaKnown RBP21.06■□□□□ 0.96
LETM1-204ENST00000510940 ATP1B4Q9UN42 357 aaPredicted RBP21.05■□□□□ 0.96
LETM1-204ENST00000510940 UACAQ9BZF9 1416 aa21.04■□□□□ 0.96
LETM1-204ENST00000510940 ABCA8O94911 1581 aa21.03■□□□□ 0.96
LETM1-204ENST00000510940 CCDC18Q5T9S5 1454 aa21.03■□□□□ 0.96
LETM1-204ENST00000510940 MAP3K1Q13233 1512 aa21.02■□□□□ 0.96
LETM1-204ENST00000510940 PLB1Q6P1J6 1458 aa21.01■□□□□ 0.95
LETM1-204ENST00000510940 UHRF1BP1LA0JNW5 1464 aa20.99■□□□□ 0.95
LETM1-204ENST00000510940 ABCC2Q92887 1545 aa20.98■□□□□ 0.95
LETM1-204ENST00000510940 CDK11AQ9UQ88 783 aaPredicted RBP20.96■□□□□ 0.95
LETM1-204ENST00000510940 NUP153P49790 1475 aaKnown RBP20.94■□□□□ 0.94
LETM1-204ENST00000510940 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
LETM1-204ENST00000510940 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
LETM1-204ENST00000510940 CFAP43Q8NDM7 1665 aa20.93■□□□□ 0.94
LETM1-204ENST00000510940 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
LETM1-204ENST00000510940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.9■□□□□ 0.94
LETM1-204ENST00000510940 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
LETM1-204ENST00000510940 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
LETM1-204ENST00000510940 ADCY10Q96PN6 1610 aa20.86■□□□□ 0.93
LETM1-204ENST00000510940 KDM5BQ9UGL1 1544 aa20.86■□□□□ 0.93
LETM1-204ENST00000510940 ATP10BO94823 1461 aa20.86■□□□□ 0.93
LETM1-204ENST00000510940 MTUS2Q5JR59 1369 aa20.85■□□□□ 0.93
LETM1-204ENST00000510940 CDK13Q14004 1512 aaKnown RBP20.84■□□□□ 0.93
LETM1-204ENST00000510940 LRRC9Q6ZRR7 1453 aa20.84■□□□□ 0.93
LETM1-204ENST00000510940 PLEKHD1A6NEE1 506 aa20.84■□□□□ 0.93
LETM1-204ENST00000510940 ARID3CA6NKF2 412 aa20.82■□□□□ 0.92
LETM1-204ENST00000510940 EHBP1L1Q8N3D4 1523 aa20.82■□□□□ 0.92
LETM1-204ENST00000510940 ZCCHC11Q5TAX3 1644 aaKnown RBP20.81■□□□□ 0.92
LETM1-204ENST00000510940 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
LETM1-204ENST00000510940 KANK4Q5T7N3 995 aaPredicted RBP20.76■□□□□ 0.91
LETM1-204ENST00000510940 SUPT6HQ7KZ85 1726 aaKnown RBP20.75■□□□□ 0.91
LETM1-204ENST00000510940 TRHP20396 242 aaPredicted RBP20.71■□□□□ 0.91
LETM1-204ENST00000510940 PPARGC1BQ86YN6 1023 aaKnown RBP20.71■□□□□ 0.91
LETM1-204ENST00000510940 KIF14Q15058 1648 aa20.7■□□□□ 0.9
LETM1-204ENST00000510940 MAGI3Q5TCQ9 1506 aa20.69■□□□□ 0.9
LETM1-204ENST00000510940 WDR7Q9Y4E6 1490 aa20.69■□□□□ 0.9
LETM1-204ENST00000510940 MAPKBP1O60336 1514 aa20.68■□□□□ 0.9
LETM1-204ENST00000510940 ASXL2Q76L83 1435 aa20.67■□□□□ 0.9
LETM1-204ENST00000510940 NCOA2Q15596 1464 aa20.66■□□□□ 0.9
LETM1-204ENST00000510940 CCNB3Q8WWL7 1395 aa20.61■□□□□ 0.89
LETM1-204ENST00000510940 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
LETM1-204ENST00000510940 ITSN2Q9NZM3 1697 aa20.59■□□□□ 0.89
LETM1-204ENST00000510940 TRIM26Q12899 539 aaPredicted RBP20.58■□□□□ 0.89
LETM1-204ENST00000510940 MYOM3Q5VTT5 1437 aa20.58■□□□□ 0.88
LETM1-204ENST00000510940 ABCC10Q5T3U5 1492 aa20.56■□□□□ 0.88
LETM1-204ENST00000510940 MIA2Q96PC5 1412 aa20.55■□□□□ 0.88
LETM1-204ENST00000510940 PHLDB1Q86UU1 1377 aa20.55■□□□□ 0.88
LETM1-204ENST00000510940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.88
LETM1-204ENST00000510940 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
LETM1-204ENST00000510940 ABCA9Q8IUA7 1624 aa20.53■□□□□ 0.88
LETM1-204ENST00000510940 RRBP1Q9P2E9 1410 aaKnown RBP20.53■□□□□ 0.88
LETM1-204ENST00000510940 FAM69CQ0P6D2 419 aa20.52■□□□□ 0.88
LETM1-204ENST00000510940 FGD6Q6ZV73 1430 aa20.52■□□□□ 0.87
LETM1-204ENST00000510940 CFDP1Q9UEE9 299 aaPredicted RBP20.51■□□□□ 0.87
LETM1-204ENST00000510940 GPATCH8Q9UKJ3 1502 aaKnown RBP20.51■□□□□ 0.87
LETM1-204ENST00000510940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.5■□□□□ 0.87
LETM1-204ENST00000510940 ARAP3Q8WWN8 1544 aa20.5■□□□□ 0.87
LETM1-204ENST00000510940 GLI2P10070 1586 aa20.5■□□□□ 0.87
LETM1-204ENST00000510940 CDC42BPAQ5VT25 1732 aa20.5■□□□□ 0.87
LETM1-204ENST00000510940 TTC37Q6PGP7 1564 aa20.49■□□□□ 0.87
LETM1-204ENST00000510940 PREX2Q70Z35 1606 aa20.49■□□□□ 0.87
LETM1-204ENST00000510940 PLCH2O75038 1416 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms