RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 MT1EP04732 61 aa4.94□□□□□ -1.62
LETM1-204ENST00000510940 SPRR2EP22531 72 aa4.93□□□□□ -1.62
LETM1-204ENST00000510940 SPRR2BP35325 72 aa4.93□□□□□ -1.62
LETM1-204ENST00000510940 SPRR2AP35326 72 aa4.93□□□□□ -1.62
LETM1-204ENST00000510940 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
LETM1-204ENST00000510940 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
LETM1-204ENST00000510940 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
LETM1-204ENST00000510940 SVIPQ8NHG7 77 aa4.85□□□□□ -1.63
LETM1-204ENST00000510940 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
LETM1-204ENST00000510940 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
LETM1-204ENST00000510940 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
LETM1-204ENST00000510940 MT1LQ93083 61 aa4.8□□□□□ -1.64
LETM1-204ENST00000510940 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
LETM1-204ENST00000510940 MT1GP13640 62 aa4.79□□□□□ -1.64
LETM1-204ENST00000510940 SPRR2DP22532 72 aa4.77□□□□□ -1.65
LETM1-204ENST00000510940 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
LETM1-204ENST00000510940 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
LETM1-204ENST00000510940 KRTAP2-1Q9BYU5 128 aa4.67□□□□□ -1.66
LETM1-204ENST00000510940 MT1MQ8N339 61 aa4.66□□□□□ -1.66
LETM1-204ENST00000510940 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
LETM1-204ENST00000510940 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
LETM1-204ENST00000510940 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
LETM1-204ENST00000510940 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
LETM1-204ENST00000510940 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
LETM1-204ENST00000510940 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
LETM1-204ENST00000510940 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
LETM1-204ENST00000510940 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
LETM1-204ENST00000510940 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
LETM1-204ENST00000510940 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
LETM1-204ENST00000510940 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
LETM1-204ENST00000510940 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
LETM1-204ENST00000510940 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
LETM1-204ENST00000510940 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
LETM1-204ENST00000510940 MT1AP04731 61 aa4.12□□□□□ -1.75
LETM1-204ENST00000510940 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
LETM1-204ENST00000510940 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
LETM1-204ENST00000510940 MT4P47944 62 aa4.1□□□□□ -1.75
LETM1-204ENST00000510940 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
LETM1-204ENST00000510940 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.76
LETM1-204ENST00000510940 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
LETM1-204ENST00000510940 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
LETM1-204ENST00000510940 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
LETM1-204ENST00000510940 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
LETM1-204ENST00000510940 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
LETM1-204ENST00000510940 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
LETM1-204ENST00000510940 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
LETM1-204ENST00000510940 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
LETM1-204ENST00000510940 MT3P25713 68 aa3.78□□□□□ -1.8
LETM1-204ENST00000510940 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
LETM1-204ENST00000510940 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
LETM1-204ENST00000510940 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
LETM1-204ENST00000510940 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
LETM1-204ENST00000510940 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
LETM1-204ENST00000510940 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
LETM1-204ENST00000510940 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
LETM1-204ENST00000510940 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
LETM1-204ENST00000510940 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
LETM1-204ENST00000510940 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
LETM1-204ENST00000510940 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
LETM1-204ENST00000510940 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
LETM1-204ENST00000510940 INE1O15225 51 aa3.32□□□□□ -1.88
LETM1-204ENST00000510940 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
LETM1-204ENST00000510940 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
LETM1-204ENST00000510940 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
LETM1-204ENST00000510940 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
LETM1-204ENST00000510940 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
LETM1-204ENST00000510940 H3BS24 57 aa2.99□□□□□ -1.93
LETM1-204ENST00000510940 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
LETM1-204ENST00000510940 PRM1P04553 51 aa2.78□□□□□ -1.96
LETM1-204ENST00000510940 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
LETM1-204ENST00000510940 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
LETM1-204ENST00000510940 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
LETM1-204ENST00000510940 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
LETM1-204ENST00000510940 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
LETM1-204ENST00000510940 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
LETM1-204ENST00000510940 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
LETM1-204ENST00000510940 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
LETM1-204ENST00000510940 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 14.7 ms