RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.262e-10■■■■■ 36.7
LETM1-204ENST00000510940 RBFOX2O43251 390 aaKnown RBP eCLIP10.94□□□□□ -0.665e-10■■■■□ 22
LETM1-204ENST00000510940 ZNF622Q969S3 477 aaKnown RBP eCLIP16.53■□□□□ 0.247e-10■□□□□ 8.5
LETM1-204ENST00000510940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.77■□□□□ 0.765e-8■■■■□ 24.3
LETM1-204ENST00000510940 AQRO60306 1485 aaKnown RBP eCLIP22.04■■□□□ 1.125e-8■□□□□ 10.1
LETM1-204ENST00000510940 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.6□□□□□ -0.074e-7■■■□□ 16.5
LETM1-204ENST00000510940 PPIGQ13427 754 aaKnown RBP eCLIP14.59□□□□□ -0.078e-7■■■□□ 14.9
LETM1-204ENST00000510940 UPF1Q92900 1129 aaKnown RBP eCLIP17.23■□□□□ 0.351e-6■□□□□ 9.2
LETM1-204ENST00000510940 FMR1Q06787 632 aaKnown RBP eCLIP15.56■□□□□ 0.083e-6■■■■□ 22.7
LETM1-204ENST00000510940 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.214e-6■□□□□ 11.1
LETM1-204ENST00000510940 TRA2AQ13595 282 aaKnown RBP eCLIP12.92□□□□□ -0.344e-6■□□□□ 9.4
LETM1-204ENST00000510940 SF3B1O75533 1304 aaKnown RBP eCLIP14.4□□□□□ -0.16e-6■■■■■ 86.2
LETM1-204ENST00000510940 FXR2P51116 673 aaKnown RBP eCLIP15.21■□□□□ 0.036e-6■■■■□ 25.8
Retrieved 13 of 13 RNA–protein pairs in 10.5 ms