RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
SNRNP27-203ENST00000450162 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
SNRNP27-203ENST00000450162 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
SNRNP27-203ENST00000450162 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
SNRNP27-203ENST00000450162 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
SNRNP27-203ENST00000450162 PRXQ9BXM0 1461 aa21.77■■□□□ 1.07
SNRNP27-203ENST00000450162 CYB5RLQ6IPT4 315 aa21.76■■□□□ 1.07
SNRNP27-203ENST00000450162 SHROOM2Q13796 1616 aa21.76■■□□□ 1.07
SNRNP27-203ENST00000450162 ARAP1Q96P48 1450 aa21.72■■□□□ 1.07
SNRNP27-203ENST00000450162 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
SNRNP27-203ENST00000450162 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
SNRNP27-203ENST00000450162 IQGAP2Q13576 1575 aa21.64■■□□□ 1.05
SNRNP27-203ENST00000450162 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
SNRNP27-203ENST00000450162 CARMIL2Q6F5E8 1435 aa21.61■■□□□ 1.05
SNRNP27-203ENST00000450162 UGGT2Q9NYU1 1516 aa21.55■■□□□ 1.04
SNRNP27-203ENST00000450162 KIF21BO75037 1637 aa21.53■■□□□ 1.04
SNRNP27-203ENST00000450162 CTTNBP2Q8WZ74 1663 aa21.53■■□□□ 1.04
SNRNP27-203ENST00000450162 TNIKQ9UKE5 1360 aa21.51■■□□□ 1.03
SNRNP27-203ENST00000450162 GOLGA3Q08378 1498 aa21.5■■□□□ 1.03
SNRNP27-203ENST00000450162 PTPRGP23470 1445 aa21.49■■□□□ 1.03
SNRNP27-203ENST00000450162 DISP1Q96F81 1524 aa21.49■■□□□ 1.03
SNRNP27-203ENST00000450162 KIAA0556O60303 1618 aa21.41■■□□□ 1.02
SNRNP27-203ENST00000450162 UBTFP17480 764 aaKnown RBP21.41■■□□□ 1.02
SNRNP27-203ENST00000450162 NPM1P06748 294 aaKnown RBP eCLIP21.4■■□□□ 1.029e-7■■■■■ 49.4
SNRNP27-203ENST00000450162 TTBK1Q5TCY1 1321 aaPredicted RBP21.35■■□□□ 1.01
SNRNP27-203ENST00000450162 UACAQ9BZF9 1416 aa21.34■■□□□ 1.01
SNRNP27-203ENST00000450162 UHRF1BP1LA0JNW5 1464 aa21.33■■□□□ 1.01
SNRNP27-203ENST00000450162 ADCY10Q96PN6 1610 aa21.3■■□□□ 1
SNRNP27-203ENST00000450162 TRHP20396 242 aaPredicted RBP21.3■■□□□ 1
SNRNP27-203ENST00000450162 SAMD9Q5K651 1589 aa21.29■■□□□ 1
SNRNP27-203ENST00000450162 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
SNRNP27-203ENST00000450162 P3H3Q8IVL6 736 aa21.27■■□□□ 1
SNRNP27-203ENST00000450162 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
SNRNP27-203ENST00000450162 ABCC2Q92887 1545 aa21.27■■□□□ 1
SNRNP27-203ENST00000450162 RANGAP1P46060 587 aaPredicted RBP21.25■□□□□ 0.99
SNRNP27-203ENST00000450162 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
SNRNP27-203ENST00000450162 PLB1Q6P1J6 1458 aa21.2■□□□□ 0.98
SNRNP27-203ENST00000450162 KDM5BQ9UGL1 1544 aa21.2■□□□□ 0.98
SNRNP27-203ENST00000450162 ABCA8O94911 1581 aa21.19■□□□□ 0.98
SNRNP27-203ENST00000450162 FHOD3Q2V2M9 1422 aa21.16■□□□□ 0.98
SNRNP27-203ENST00000450162 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
SNRNP27-203ENST00000450162 ARHGAP35Q9NRY4 1499 aa21.13■□□□□ 0.97
SNRNP27-203ENST00000450162 FMN1Q68DA7 1419 aa21.12■□□□□ 0.97
SNRNP27-203ENST00000450162 ASXL2Q76L83 1435 aa21.12■□□□□ 0.97
SNRNP27-203ENST00000450162 FAM69CQ0P6D2 419 aa21.1■□□□□ 0.97
SNRNP27-203ENST00000450162 ZCCHC11Q5TAX3 1644 aaKnown RBP21.07■□□□□ 0.96
SNRNP27-203ENST00000450162 RAPGEF6Q8TEU7 1601 aa21.07■□□□□ 0.96
SNRNP27-203ENST00000450162 CLIP1P30622 1438 aa21.05■□□□□ 0.96
SNRNP27-203ENST00000450162 ATP10BO94823 1461 aa21.05■□□□□ 0.96
SNRNP27-203ENST00000450162 DIP2BQ9P265 1576 aa21.04■□□□□ 0.96
SNRNP27-203ENST00000450162 NUP153P49790 1475 aaKnown RBP21.02■□□□□ 0.96
SNRNP27-203ENST00000450162 WDR7Q9Y4E6 1490 aa21.02■□□□□ 0.96
SNRNP27-203ENST00000450162 KIF13AQ9H1H9 1805 aa21■□□□□ 0.95
SNRNP27-203ENST00000450162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21■□□□□ 0.95
SNRNP27-203ENST00000450162 HNRNPUL2Q1KMD3 747 aaKnown RBP21■□□□□ 0.95
SNRNP27-203ENST00000450162 GLI2P10070 1586 aa21■□□□□ 0.95
SNRNP27-203ENST00000450162 LOC105371045A0A1W2PR82 267 aa20.99■□□□□ 0.95
SNRNP27-203ENST00000450162 EPRSP07814 1512 aaKnown RBP20.99■□□□□ 0.95
SNRNP27-203ENST00000450162 ARID3CA6NKF2 412 aa20.97■□□□□ 0.95
SNRNP27-203ENST00000450162 PLEKHD1A6NEE1 506 aa20.96■□□□□ 0.95
SNRNP27-203ENST00000450162 CEP162Q5TB80 1403 aa20.95■□□□□ 0.95
SNRNP27-203ENST00000450162 KCNH8Q96L42 1107 aa20.93■□□□□ 0.94
SNRNP27-203ENST00000450162 ATP1B4Q9UN42 357 aaPredicted RBP20.93■□□□□ 0.94
SNRNP27-203ENST00000450162 CDK11AQ9UQ88 783 aaPredicted RBP20.93■□□□□ 0.94
SNRNP27-203ENST00000450162 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
SNRNP27-203ENST00000450162 CASKIN1Q8WXD9 1431 aa20.92■□□□□ 0.94
SNRNP27-203ENST00000450162 FOXD1Q16676 465 aa20.88■□□□□ 0.93
SNRNP27-203ENST00000450162 FYCO1Q9BQS8 1478 aa20.86■□□□□ 0.93
SNRNP27-203ENST00000450162 CD109Q6YHK3 1445 aa20.85■□□□□ 0.93
SNRNP27-203ENST00000450162 CCDC18Q5T9S5 1454 aa20.84■□□□□ 0.93
SNRNP27-203ENST00000450162 TEX14Q8IWB6 1497 aa20.84■□□□□ 0.93
SNRNP27-203ENST00000450162 MAP3K4Q9Y6R4 1608 aa20.84■□□□□ 0.93
SNRNP27-203ENST00000450162 CDK13Q14004 1512 aaKnown RBP20.83■□□□□ 0.92
SNRNP27-203ENST00000450162 CFAP43Q8NDM7 1665 aa20.82■□□□□ 0.92
SNRNP27-203ENST00000450162 MAGI3Q5TCQ9 1506 aa20.81■□□□□ 0.92
SNRNP27-203ENST00000450162 PCF11O94913 1555 aaKnown RBP20.8■□□□□ 0.92
SNRNP27-203ENST00000450162 ABCA9Q8IUA7 1624 aa20.78■□□□□ 0.92
SNRNP27-203ENST00000450162 TSPOAP1O95153 1857 aa20.78■□□□□ 0.92
SNRNP27-203ENST00000450162 TROQ12816 1431 aaPredicted RBP20.76■□□□□ 0.91
SNRNP27-203ENST00000450162 PHLDB1Q86UU1 1377 aa20.75■□□□□ 0.91
SNRNP27-203ENST00000450162 PPRC1Q5VV67 1664 aaKnown RBP20.74■□□□□ 0.91
SNRNP27-203ENST00000450162 VPS8Q8N3P4 1428 aa20.72■□□□□ 0.91
SNRNP27-203ENST00000450162 KDM6BO15054 1643 aa20.7■□□□□ 0.9
SNRNP27-203ENST00000450162 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
SNRNP27-203ENST00000450162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.69■□□□□ 0.9
SNRNP27-203ENST00000450162 NEO1Q92859 1461 aa20.68■□□□□ 0.9
SNRNP27-203ENST00000450162 KIF14Q15058 1648 aa20.66■□□□□ 0.9
SNRNP27-203ENST00000450162 PLCH2O75038 1416 aa20.65■□□□□ 0.9
SNRNP27-203ENST00000450162 ARAP3Q8WWN8 1544 aa20.63■□□□□ 0.89
SNRNP27-203ENST00000450162 MTUS2Q5JR59 1369 aa20.63■□□□□ 0.89
SNRNP27-203ENST00000450162 TTC37Q6PGP7 1564 aa20.62■□□□□ 0.89
SNRNP27-203ENST00000450162 EFCAB2Q5VUJ9 269 aa20.61■□□□□ 0.89
SNRNP27-203ENST00000450162 FANCAO15360 1455 aa20.61■□□□□ 0.89
SNRNP27-203ENST00000450162 COL17A1Q9UMD9 1497 aaPredicted RBP20.61■□□□□ 0.89
SNRNP27-203ENST00000450162 MAP3K1Q13233 1512 aa20.58■□□□□ 0.89
SNRNP27-203ENST00000450162 CFAP74Q9C0B2 1584 aa20.58■□□□□ 0.88
SNRNP27-203ENST00000450162 APLP2Q06481 763 aa20.57■□□□□ 0.88
SNRNP27-203ENST00000450162 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
SNRNP27-203ENST00000450162 AKNAQ7Z591 1439 aa20.57■□□□□ 0.88
SNRNP27-203ENST00000450162 EHBP1L1Q8N3D4 1523 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms