RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
SNRNP27-203ENST00000450162 RPS28P62857 69 aaKnown RBP4.98□□□□□ -1.61
SNRNP27-203ENST00000450162 PSPHP1O15172 72 aa4.97□□□□□ -1.61
SNRNP27-203ENST00000450162 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.62
SNRNP27-203ENST00000450162 TNP1P09430 55 aa4.95□□□□□ -1.62
SNRNP27-203ENST00000450162 C10orf95Q9H7T3 257 aa4.94□□□□□ -1.62
SNRNP27-203ENST00000450162 K7ERS5 55 aa4.93□□□□□ -1.62
SNRNP27-203ENST00000450162 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
SNRNP27-203ENST00000450162 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
SNRNP27-203ENST00000450162 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
SNRNP27-203ENST00000450162 SPRR2DP22532 72 aa4.87□□□□□ -1.63
SNRNP27-203ENST00000450162 A6NED7 52 aa4.84□□□□□ -1.63
SNRNP27-203ENST00000450162 MT1EP04732 61 aa4.84□□□□□ -1.63
SNRNP27-203ENST00000450162 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
SNRNP27-203ENST00000450162 LCE3AQ5TA76 89 aa4.79□□□□□ -1.64
SNRNP27-203ENST00000450162 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
SNRNP27-203ENST00000450162 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
SNRNP27-203ENST00000450162 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
SNRNP27-203ENST00000450162 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
SNRNP27-203ENST00000450162 MT1GP13640 62 aa4.73□□□□□ -1.65
SNRNP27-203ENST00000450162 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
SNRNP27-203ENST00000450162 CDC42SE1Q9NRR8 79 aa4.67□□□□□ -1.66
SNRNP27-203ENST00000450162 MT1LQ93083 61 aa4.66□□□□□ -1.66
SNRNP27-203ENST00000450162 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
SNRNP27-203ENST00000450162 MT1MQ8N339 61 aa4.59□□□□□ -1.67
SNRNP27-203ENST00000450162 ROMO1P60602 79 aa4.58□□□□□ -1.68
SNRNP27-203ENST00000450162 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
SNRNP27-203ENST00000450162 MT3P25713 68 aa4.5□□□□□ -1.69
SNRNP27-203ENST00000450162 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
SNRNP27-203ENST00000450162 BRK1Q8WUW1 75 aa4.34□□□□□ -1.71
SNRNP27-203ENST00000450162 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
SNRNP27-203ENST00000450162 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
SNRNP27-203ENST00000450162 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
SNRNP27-203ENST00000450162 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
SNRNP27-203ENST00000450162 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
SNRNP27-203ENST00000450162 SVIPQ8NHG7 77 aa4.28□□□□□ -1.72
SNRNP27-203ENST00000450162 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
SNRNP27-203ENST00000450162 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
SNRNP27-203ENST00000450162 MT4P47944 62 aa4.21□□□□□ -1.74
SNRNP27-203ENST00000450162 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
SNRNP27-203ENST00000450162 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
SNRNP27-203ENST00000450162 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
SNRNP27-203ENST00000450162 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
SNRNP27-203ENST00000450162 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
SNRNP27-203ENST00000450162 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
SNRNP27-203ENST00000450162 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
SNRNP27-203ENST00000450162 MT1AP04731 61 aa3.98□□□□□ -1.77
SNRNP27-203ENST00000450162 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
SNRNP27-203ENST00000450162 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
SNRNP27-203ENST00000450162 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
SNRNP27-203ENST00000450162 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
SNRNP27-203ENST00000450162 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
SNRNP27-203ENST00000450162 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
SNRNP27-203ENST00000450162 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
SNRNP27-203ENST00000450162 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
SNRNP27-203ENST00000450162 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
SNRNP27-203ENST00000450162 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
SNRNP27-203ENST00000450162 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
SNRNP27-203ENST00000450162 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
SNRNP27-203ENST00000450162 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
SNRNP27-203ENST00000450162 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
SNRNP27-203ENST00000450162 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
SNRNP27-203ENST00000450162 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
SNRNP27-203ENST00000450162 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
SNRNP27-203ENST00000450162 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
SNRNP27-203ENST00000450162 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
SNRNP27-203ENST00000450162 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
SNRNP27-203ENST00000450162 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
SNRNP27-203ENST00000450162 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
SNRNP27-203ENST00000450162 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
SNRNP27-203ENST00000450162 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
SNRNP27-203ENST00000450162 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
SNRNP27-203ENST00000450162 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
SNRNP27-203ENST00000450162 INE1O15225 51 aa2.33□□□□□ -2.04
SNRNP27-203ENST00000450162 PRM1P04553 51 aa2.31□□□□□ -2.04
SNRNP27-203ENST00000450162 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SNRNP27-203ENST00000450162 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SNRNP27-203ENST00000450162 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms