RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 PTBP1P26599 531 aaKnown RBP eCLIP10.28□□□□□ -0.761e-11■■■■■ 65.8
SNRNP27-203ENST00000450162 PPIGQ13427 754 aaKnown RBP eCLIP14.74□□□□□ -0.054e-9■□□□□ 10.2
SNRNP27-203ENST00000450162 NCBP2P52298 156 aaKnown RBP eCLIP12.09□□□□□ -0.477e-9■□□□□ 10
SNRNP27-203ENST00000450162 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.198e-9■□□□□ 8.7
SNRNP27-203ENST00000450162 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.65□□□□□ -0.061e-8■■□□□ 13.2
SNRNP27-203ENST00000450162 U2AF2P26368 475 aaKnown RBP eCLIP14.77□□□□□ -0.051e-7■■□□□ 13
SNRNP27-203ENST00000450162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.64□□□□□ -0.232e-7■■■■□ 21.7
SNRNP27-203ENST00000450162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.73□□□□□ -0.213e-7■■■■■ 96.8
SNRNP27-203ENST00000450162 TIA1P31483 386 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■■■□ 26.2
SNRNP27-203ENST00000450162 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.85■□□□□ 0.133e-7■□□□□ 10.9
SNRNP27-203ENST00000450162 SUB1P53999 127 aaKnown RBP eCLIP10.04□□□□□ -0.85e-7■■■■■ 30.2
SNRNP27-203ENST00000450162 DDX3XO00571 662 aaKnown RBP eCLIP13.54□□□□□ -0.245e-7■□□□□ 9.8
SNRNP27-203ENST00000450162 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.266e-7■■■□□ 15.4
SNRNP27-203ENST00000450162 NPM1P06748 294 aaKnown RBP eCLIP21.4■■□□□ 1.029e-7■■■■■ 49.4
SNRNP27-203ENST00000450162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■□□ 14.8
SNRNP27-203ENST00000450162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.96□□□□□ -0.653e-6■■■■■ 41.9
SNRNP27-203ENST00000450162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.99□□□□□ -0.173e-6■■□□□ 12.1
SNRNP27-203ENST00000450162 MATR3P43243 847 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■□□□ 12.9
SNRNP27-203ENST00000450162 PCBP2Q15366 365 aaKnown RBP eCLIP12.45□□□□□ -0.423e-6■■■□□ 14.6
SNRNP27-203ENST00000450162 RBFOX2O43251 390 aaKnown RBP eCLIP10.29□□□□□ -0.764e-6■■■■□ 21.2
SNRNP27-203ENST00000450162 SF3B1O75533 1304 aaKnown RBP eCLIP14.2□□□□□ -0.147e-6■■■■■ 28.7
Retrieved 21 of 21 RNA–protein pairs in 5 ms