RNA–Protein interactions for RNA: ENST00000427469.5

RCC1-207, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-207ENST00000427469 DKC1O60832 514 aaKnown RBP eCLIP14.64□□□□□ -0.071e-323■■■■■ 48.7
RCC1-207ENST00000427469 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.24□□□□□ -0.454e-55■■■■□ 25.9
RCC1-207ENST00000427469 GPKOWQ92917 476 aaPredicted RBP eCLIP15.14■□□□□ 0.012e-47■□□□□ 10.3
RCC1-207ENST00000427469 NIPBLQ6KC79 2804 aaeCLIP11.73□□□□□ -0.533e-44■■□□□ 13
RCC1-207ENST00000427469 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.17■□□□□ 0.025e-43■□□□□ 9.5
RCC1-207ENST00000427469 NCBP2P52298 156 aaKnown RBP eCLIP11.9□□□□□ -0.54e-33■■■■■ 42.7
RCC1-207ENST00000427469 NOLC1Q14978 699 aaKnown RBP eCLIP14.34□□□□□ -0.113e-26■■□□□ 13.5
RCC1-207ENST00000427469 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.413e-23■■□□□ 12.7
RCC1-207ENST00000427469 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.01□□□□□ -0.493e-23■■■□□ 18.2
RCC1-207ENST00000427469 TIA1P31483 386 aaKnown RBP eCLIP12□□□□□ -0.492e-22■■■■■ 27.6
RCC1-207ENST00000427469 ZC3H11AO75152 810 aaKnown RBP eCLIP14.53□□□□□ -0.084e-20■■■■■ 59.1
RCC1-207ENST00000427469 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.02□□□□□ -0.332e-18■■■■□ 23.2
RCC1-207ENST00000427469 RBM22Q9NW64 420 aaKnown RBP eCLIP13.06□□□□□ -0.322e-18■■■■■ 27.1
RCC1-207ENST00000427469 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.68□□□□□ -0.383e-18■□□□□ 11.2
RCC1-207ENST00000427469 HNRNPCP07910 306 aaKnown RBP eCLIP9.56□□□□□ -0.881e-17■■□□□ 13.5
RCC1-207ENST00000427469 CPSF6Q16630 551 aaKnown RBP eCLIP12.14□□□□□ -0.477e-16■■■■■ 39.3
RCC1-207ENST00000427469 AATFQ9NY61 560 aaKnown RBP eCLIP16.01■□□□□ 0.152e-14■□□□□ 11.3
RCC1-207ENST00000427469 DDX3XO00571 662 aaKnown RBP eCLIP13.33□□□□□ -0.284e-14■■■■■ 28.6
RCC1-207ENST00000427469 KHSRPQ92945 711 aaKnown RBP eCLIP14.61□□□□□ -0.077e-13■■■■■ 27.3
RCC1-207ENST00000427469 U2AF2P26368 475 aaKnown RBP eCLIP14.6□□□□□ -0.072e-12■■□□□ 11.6
RCC1-207ENST00000427469 SRSF9Q13242 221 aaKnown RBP eCLIP8.09□□□□□ -1.111e-10■■□□□ 13
RCC1-207ENST00000427469 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.383e-10■■■■■ 37.7
RCC1-207ENST00000427469 METAP2P50579 478 aaKnown RBP eCLIP15□□□□□ -0.016e-10■□□□□ 9.1
RCC1-207ENST00000427469 RPS3P23396 243 aaKnown RBP eCLIP12.66□□□□□ -0.388e-10■■■■□ 20.7
RCC1-207ENST00000427469 RBM15Q96T37 977 aaKnown RBP eCLIP13.12□□□□□ -0.311e-8■■□□□ 14.3
RCC1-207ENST00000427469 SF3A3Q12874 501 aaKnown RBP eCLIP11.33□□□□□ -0.62e-8■■■■□ 23.3
RCC1-207ENST00000427469 EFTUD2Q15029 972 aaKnown RBP eCLIP12.31□□□□□ -0.443e-8■■■■□ 24.7
RCC1-207ENST00000427469 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.67■□□□□ 0.12e-7■□□□□ 10.7
RCC1-207ENST00000427469 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■■■■■ 51.9
RCC1-207ENST00000427469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.9□□□□□ -0.023e-7■■■■■ 50
RCC1-207ENST00000427469 TIAL1Q01085 375 aaKnown RBP eCLIP12.55□□□□□ -0.45e-7■■□□□ 14.4
RCC1-207ENST00000427469 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■■■■■ 139.3
RCC1-207ENST00000427469 PPIGQ13427 754 aaKnown RBP eCLIP15.16■□□□□ 0.025e-7■■■□□ 15.3
RCC1-207ENST00000427469 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.98□□□□□ -0.495e-7■■■■□ 24.4
RCC1-207ENST00000427469 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.37e-7■■■□□ 16.2
RCC1-207ENST00000427469 RBFOX2O43251 390 aaKnown RBP eCLIP9.97□□□□□ -0.818e-7■■■■□ 22
RCC1-207ENST00000427469 YBX3P16989 372 aaKnown RBP eCLIP17.58■□□□□ 0.48e-7■□□□□ 9
RCC1-207ENST00000427469 SF3B4Q15427 424 aaKnown RBP eCLIP11.84□□□□□ -0.519e-7■■■■■ 37.3
RCC1-207ENST00000427469 CSTF2P33240 577 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■■■■ 30.1
RCC1-207ENST00000427469 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.32□□□□□ -0.441e-6■□□□□ 9.2
RCC1-207ENST00000427469 FUSP35637 526 aaKnown RBP eCLIP8.79□□□□□ -11e-6■■■□□ 15.1
RCC1-207ENST00000427469 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.21□□□□□ -0.292e-6■■□□□ 12.2
RCC1-207ENST00000427469 FMR1Q06787 632 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■■■ 206.2
RCC1-207ENST00000427469 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.113e-6■■■■■ 39.6
RCC1-207ENST00000427469 PCBP2Q15366 365 aaKnown RBP eCLIP12.2□□□□□ -0.463e-6■□□□□ 9.3
RCC1-207ENST00000427469 NKRFO15226 690 aaKnown RBP eCLIP15.22■□□□□ 0.033e-6■□□□□ 8.1
RCC1-207ENST00000427469 ILF3Q12906 894 aaKnown RBP eCLIP13□□□□□ -0.334e-6■□□□□ 10.1
RCC1-207ENST00000427469 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.044e-6■■□□□ 12.4
RCC1-207ENST00000427469 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.945e-6■■□□□ 12
Retrieved 49 of 49 RNA–protein pairs in 13.1 ms