Protein–RNA interactions for Protein: Q8N5P1

ZC3H8, Zinc finger CCCH domain-containing protein 8, humanhuman

Known RBP eCLIP

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8Q8N5P1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.3□□□□□ -2.047e-132■■■■■ 819.4
ZC3H8Q8N5P1 SCARNA9-201ENST00000530422 353 ntBASIC8.89□□□□□ -0.992e-32■■■■■ 309.8
ZC3H8Q8N5P1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.532e-32■■■■■ 309.8
ZC3H8Q8N5P1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.732e-32■■■■■ 309.8
ZC3H8Q8N5P1 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 43.55□□□□□ -1.842e-32■■■■■ 309.8
ZC3H8Q8N5P1 TRRAP-203ENST00000417523 550 ntTSL 416.28■□□□□ 0.26e-36■■■■■ 164.5
ZC3H8Q8N5P1 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.196e-36■■■■■ 164.5
ZC3H8Q8N5P1 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.216e-36■■■■■ 164.5
ZC3H8Q8N5P1 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.256e-36■■■■■ 164.5
ZC3H8Q8N5P1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.386e-36■■■■■ 164.5
ZC3H8Q8N5P1 SNORD28-201ENST00000384706 75 ntBASIC0.79□□□□□ -2.281e-33■■■■■ 155.4
ZC3H8Q8N5P1 SNORD24-201ENST00000383884 75 ntBASIC1.92□□□□□ -2.12e-17■■■■■ 100.6
ZC3H8Q8N5P1 SNHG1-216ENST00000541416 996 ntTSL 212.08□□□□□ -0.481e-26■■■■■ 97.1
ZC3H8Q8N5P1 SNHG1-207ENST00000537965 578 ntTSL 55.18□□□□□ -1.581e-26■■■■■ 97.1
ZC3H8Q8N5P1 SNHG1-222ENST00000545308 646 ntTSL 24.67□□□□□ -1.661e-26■■■■■ 97.1
ZC3H8Q8N5P1 SNORD56-201ENST00000413522 71 ntBASIC3.37□□□□□ -1.875e-39■■■■■ 85.9
ZC3H8Q8N5P1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.463e-34■■■■■ 85.1
ZC3H8Q8N5P1 NCAPD2-207ENST00000539084 4290 ntTSL 211.45□□□□□ -0.583e-34■■■■■ 85.1
ZC3H8Q8N5P1 NCAPD2-202ENST00000382457 2844 ntTSL 510.93□□□□□ -0.663e-34■■■■■ 85.1
ZC3H8Q8N5P1 NCAPD2-208ENST00000539714 533 ntTSL 36.98□□□□□ -1.293e-34■■■■■ 85.1
ZC3H8Q8N5P1 NCAPD2-210ENST00000541399 584 ntTSL 56.7□□□□□ -1.343e-34■■■■■ 85.1
ZC3H8Q8N5P1 SCARNA10-201ENST00000459255 330 ntBASIC4.67□□□□□ -1.663e-34■■■■■ 85.1
ZC3H8Q8N5P1 snoU2_19.4-201ENST00000364329 80 ntBASIC2.18□□□□□ -2.064e-32■■■■■ 77.2
ZC3H8Q8N5P1 SNHG1-221ENST00000544983 870 ntTSL 211.82□□□□□ -0.521e-26■■■■■ 77.1
ZC3H8Q8N5P1 SNHG1-215ENST00000540904 594 ntTSL 59.33□□□□□ -0.921e-26■■■■■ 77.1
ZC3H8Q8N5P1 AC006064.5-201ENST00000541782 248 ntBASIC4.32□□□□□ -1.723e-34■■■■■ 75.7
ZC3H8Q8N5P1 SNORD36C-201ENST00000516733 66 ntBASIC1.74□□□□□ -2.131e-39■■■■■ 72.4
ZC3H8Q8N5P1 RPL7A-203ENST00000426651 1057 ntTSL 519.72■□□□□ 0.751e-8■■■■■ 71.2
ZC3H8Q8N5P1 RPL7A-206ENST00000485706 743 ntTSL 212.64□□□□□ -0.391e-8■■■■■ 71.2
ZC3H8Q8N5P1 GAS5-229ENST00000458220 469 ntTSL 24.17□□□□□ -1.742e-24■■■■■ 69.5
ZC3H8Q8N5P1 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.54□□□□□ -1.362e-11■■■■■ 65.7
ZC3H8Q8N5P1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.31□□□□□ -1.42e-11■■■■■ 65.7
ZC3H8Q8N5P1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.74□□□□□ -1.812e-11■■■■■ 65.7
ZC3H8Q8N5P1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.96□□□□□ -2.17e-13■■■■■ 65
ZC3H8Q8N5P1 SNORD45A-201ENST00000384512 84 ntBASIC-0.15□□□□□ -2.438e-36■■■■■ 64.6
ZC3H8Q8N5P1 GAS5-204ENST00000421068 1060 ntTSL 24.76□□□□□ -1.651e-23■■■■■ 64.3
ZC3H8Q8N5P1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.22□□□□□ -1.731e-23■■■■■ 64.3
ZC3H8Q8N5P1 SNORD91A-202ENST00000609620 191 ntBASIC7.6□□□□□ -1.195e-26■■■■■ 62.5
ZC3H8Q8N5P1 SNORD91A-201ENST00000390861 95 nt1.5□□□□□ -2.175e-26■■■■■ 62.5
ZC3H8Q8N5P1 SNORD111-201ENST00000408139 94 ntBASIC1.28□□□□□ -2.22e-8■■■■■ 61.9
ZC3H8Q8N5P1 RPL37-202ENST00000504562 505 ntTSL 211.39□□□□□ -0.591e-11■■■■■ 60.9
ZC3H8Q8N5P1 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.01□□□□□ -1.131e-11■■■■■ 60.9
ZC3H8Q8N5P1 RPL37-203ENST00000507642 425 ntTSL 37.53□□□□□ -1.21e-11■■■■■ 60.9
ZC3H8Q8N5P1 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.231e-11■■■■■ 60.9
ZC3H8Q8N5P1 SNORD72-201ENST00000390994 80 ntBASIC1.95□□□□□ -2.11e-11■■■■■ 60.9
ZC3H8Q8N5P1 SCARNA2-201ENST00000458748 420 ntBASIC17.54■□□□□ 0.41e-323■■■■■ 60.1
ZC3H8Q8N5P1 AL356488.2-201ENST00000602755 427 ntBASIC17.36■□□□□ 0.371e-323■■■■■ 60.1
ZC3H8Q8N5P1 RPL7A-209ENST00000496554 947 ntTSL 217.89■□□□□ 0.451e-7■■■■■ 59.5
ZC3H8Q8N5P1 RBMX-210ENST00000565907 563 ntTSL 214.53□□□□□ -0.081e-15■■■■■ 59.4
ZC3H8Q8N5P1 RBMX-204ENST00000464781 1852 ntTSL 214.06□□□□□ -0.161e-15■■■■■ 59.4
ZC3H8Q8N5P1 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC13.1□□□□□ -0.311e-15■■■■■ 59.4
ZC3H8Q8N5P1 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.421e-15■■■■■ 59.4
ZC3H8Q8N5P1 RBMX-211ENST00000567262 477 ntTSL 512.34□□□□□ -0.431e-15■■■■■ 59.4
ZC3H8Q8N5P1 RBMX-208ENST00000563370 577 ntTSL 312.34□□□□□ -0.431e-15■■■■■ 59.4
ZC3H8Q8N5P1 RBMX-212ENST00000568578 4887 ntTSL 1 (best)9.95□□□□□ -0.821e-15■■■■■ 59.4
ZC3H8Q8N5P1 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC9.4□□□□□ -0.911e-15■■■■■ 59.4
ZC3H8Q8N5P1 RBMX-202ENST00000419968 940 ntTSL 59.26□□□□□ -0.931e-15■■■■■ 59.4
ZC3H8Q8N5P1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.43□□□□□ -1.541e-15■■■■■ 59.4
ZC3H8Q8N5P1 SNORD61-201ENST00000384252 73 ntBASIC1.89□□□□□ -2.111e-15■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.06□□□□□ -0.162e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC11.49□□□□□ -0.572e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-209ENST00000538654 2768 ntTSL 29.43□□□□□ -0.92e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC7.63□□□□□ -1.192e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.88□□□□□ -1.312e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-224ENST00000545688 610 ntTSL 36.04□□□□□ -1.442e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.6□□□□□ -1.512e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.12□□□□□ -1.592e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.73□□□□□ -1.652e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.57□□□□□ -1.682e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-214ENST00000540865 784 ntTSL 54.39□□□□□ -1.712e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-203ENST00000537024 532 ntTSL 54.38□□□□□ -1.712e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.33□□□□□ -1.722e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-220ENST00000544550 636 ntTSL 23.85□□□□□ -1.792e-11■■■■■ 59.4
ZC3H8Q8N5P1 SNHG1-202ENST00000535689 550 ntTSL 23.75□□□□□ -1.812e-11■■■■■ 59.4
ZC3H8Q8N5P1 RPL7A-205ENST00000468019 941 ntTSL 213.03□□□□□ -0.327e-8■■■■■ 57.2
ZC3H8Q8N5P1 RPL7A-207ENST00000489392 966 ntTSL 510.53□□□□□ -0.727e-8■■■■■ 57.2
ZC3H8Q8N5P1 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC8.86□□□□□ -0.997e-8■■■■■ 57.2
ZC3H8Q8N5P1 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.37e-8■■■■■ 57.2
ZC3H8Q8N5P1 RPL7A-204ENST00000463740 1164 ntTSL 56.32□□□□□ -1.47e-8■■■■■ 57.2
ZC3H8Q8N5P1 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.723e-16■■■■■ 56.2
ZC3H8Q8N5P1 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.78□□□□□ -1.323e-16■■■■■ 56.2
ZC3H8Q8N5P1 TNKS-203ENST00000517770 574 ntTSL 45.45□□□□□ -1.543e-16■■■■■ 56.2
ZC3H8Q8N5P1 RABGGTB-204ENST00000461653 1702 ntTSL 55.26□□□□□ -1.572e-23■■■■■ 55
ZC3H8Q8N5P1 RABGGTB-211ENST00000489450 586 ntTSL 53.96□□□□□ -1.782e-23■■■■■ 55
ZC3H8Q8N5P1 RPL23A-209ENST00000582736 595 ntTSL 1 (best)14.53□□□□□ -0.081e-14■■■■■ 54.7
ZC3H8Q8N5P1 SNORD42B-201ENST00000458893 67 ntBASIC0.29□□□□□ -2.361e-14■■■■■ 54.7
ZC3H8Q8N5P1 RPL7A-208ENST00000492798 374 ntTSL 1 (best)6.11□□□□□ -1.439e-11■■■■■ 53.5
ZC3H8Q8N5P1 RABGGTB-214ENST00000497648 1319 ntTSL 29.77□□□□□ -0.854e-9■■■■■ 53.2
ZC3H8Q8N5P1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.43■□□□□ 0.062e-8■■■■■ 52.6
ZC3H8Q8N5P1 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.692e-8■■■■■ 52.6
ZC3H8Q8N5P1 GAS5-216ENST00000443799 897 ntTSL 59.49□□□□□ -0.893e-13■■■■■ 52.4
ZC3H8Q8N5P1 GAS5-203ENST00000416952 799 ntTSL 28.23□□□□□ -1.093e-13■■■■■ 52.4
ZC3H8Q8N5P1 GAS5-226ENST00000455838 632 ntTSL 28.22□□□□□ -1.093e-13■■■■■ 52.4
ZC3H8Q8N5P1 GAS5-227ENST00000456293 583 ntTSL 37.25□□□□□ -1.253e-13■■■■■ 52.4
ZC3H8Q8N5P1 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.02□□□□□ -1.293e-13■■■■■ 52.4
ZC3H8Q8N5P1 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.773e-9■■■■■ 50.3
ZC3H8Q8N5P1 RABGGTB-208ENST00000471759 2137 ntTSL 27.18□□□□□ -1.263e-9■■■■■ 50.3
ZC3H8Q8N5P1 RABGGTB-205ENST00000462042 569 ntTSL 36.62□□□□□ -1.353e-9■■■■■ 50.3
ZC3H8Q8N5P1 RABGGTB-209ENST00000473406 721 ntTSL 56.6□□□□□ -1.353e-9■■■■■ 50.3
ZC3H8Q8N5P1 RABGGTB-212ENST00000491266 961 ntTSL 36.19□□□□□ -1.423e-9■■■■■ 50.3
Retrieved 100 of 950 protein–RNA pairs in 14.5 ms