RNA–Protein interactions for RNA: ENST00000427469.5

RCC1-207, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-207ENST00000427469 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
RCC1-207ENST00000427469 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.31
RCC1-207ENST00000427469 ABCC9O60706 1549 aa28.95■■■□□ 2.23
RCC1-207ENST00000427469 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
RCC1-207ENST00000427469 NACADO15069 1562 aa27.69■■■□□ 2.02
RCC1-207ENST00000427469 MYO15BQ96JP2 1530 aa27.48■■□□□ 1.99
RCC1-207ENST00000427469 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
RCC1-207ENST00000427469 ZCCHC6Q5VYS8 1495 aaKnown RBP27.36■■□□□ 1.97
RCC1-207ENST00000427469 DCAF1Q9Y4B6 1507 aa27.24■■□□□ 1.95
RCC1-207ENST00000427469 DCAF8L2P0C7V8 631 aa27.18■■□□□ 1.94
RCC1-207ENST00000427469 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.93
RCC1-207ENST00000427469 PABPN1Q86U42 306 aaKnown RBP eCLIP26.86■■□□□ 1.89
RCC1-207ENST00000427469 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
RCC1-207ENST00000427469 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
RCC1-207ENST00000427469 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
RCC1-207ENST00000427469 EIF4G1Q04637 1599 aaKnown RBP26.32■■□□□ 1.8
RCC1-207ENST00000427469 CC2D2AQ9P2K1 1620 aa26.29■■□□□ 1.8
RCC1-207ENST00000427469 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
RCC1-207ENST00000427469 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
RCC1-207ENST00000427469 NCAPD3P42695 1498 aa25.52■■□□□ 1.68
RCC1-207ENST00000427469 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
RCC1-207ENST00000427469 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
RCC1-207ENST00000427469 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
RCC1-207ENST00000427469 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
RCC1-207ENST00000427469 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
RCC1-207ENST00000427469 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
RCC1-207ENST00000427469 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
RCC1-207ENST00000427469 WIZO95785 1651 aa25.07■■□□□ 1.6
RCC1-207ENST00000427469 NESP48681 1621 aa25.01■■□□□ 1.59
RCC1-207ENST00000427469 LAMC3Q9Y6N6 1575 aa24.95■■□□□ 1.58
RCC1-207ENST00000427469 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
RCC1-207ENST00000427469 CUX2O14529 1486 aa24.9■■□□□ 1.58
RCC1-207ENST00000427469 THOC2Q8NI27 1593 aaKnown RBP24.86■■□□□ 1.57
RCC1-207ENST00000427469 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
RCC1-207ENST00000427469 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
RCC1-207ENST00000427469 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
RCC1-207ENST00000427469 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
RCC1-207ENST00000427469 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
RCC1-207ENST00000427469 PRDM2Q13029 1718 aa24.59■■□□□ 1.53
RCC1-207ENST00000427469 CFTRP13569 1480 aa24.55■■□□□ 1.52
RCC1-207ENST00000427469 WDR62O43379 1518 aa24.52■■□□□ 1.52
RCC1-207ENST00000427469 MRC2Q9UBG0 1479 aa24.5■■□□□ 1.51
RCC1-207ENST00000427469 CEP164Q9UPV0 1460 aa24.45■■□□□ 1.51
RCC1-207ENST00000427469 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
RCC1-207ENST00000427469 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
RCC1-207ENST00000427469 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
RCC1-207ENST00000427469 URB2Q14146 1524 aaKnown RBP24.29■■□□□ 1.48
RCC1-207ENST00000427469 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
RCC1-207ENST00000427469 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
RCC1-207ENST00000427469 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
RCC1-207ENST00000427469 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
RCC1-207ENST00000427469 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
RCC1-207ENST00000427469 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
RCC1-207ENST00000427469 EIF4G3O43432 1585 aaKnown RBP23.88■■□□□ 1.41
RCC1-207ENST00000427469 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
RCC1-207ENST00000427469 CUX1P39880 1505 aa23.79■■□□□ 1.4
RCC1-207ENST00000427469 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
RCC1-207ENST00000427469 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
RCC1-207ENST00000427469 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
RCC1-207ENST00000427469 CHD1O14646 1710 aa23.7■■□□□ 1.38
RCC1-207ENST00000427469 RAD54L2Q9Y4B4 1467 aa23.68■■□□□ 1.38
RCC1-207ENST00000427469 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.383e-10■■■■■ 37.7
RCC1-207ENST00000427469 SOGA1O94964 1423 aa23.6■■□□□ 1.37
RCC1-207ENST00000427469 OSCARQ8IYS5 282 aa23.6■■□□□ 1.37
RCC1-207ENST00000427469 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
RCC1-207ENST00000427469 PBRM1Q86U86 1689 aa23.56■■□□□ 1.36
RCC1-207ENST00000427469 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
RCC1-207ENST00000427469 RIMBP3CA6NJZ7 1639 aa23.52■■□□□ 1.36
RCC1-207ENST00000427469 RIMBP3BA6NNM3 1639 aa23.52■■□□□ 1.36
RCC1-207ENST00000427469 TOP2BQ02880 1626 aa23.52■■□□□ 1.36
RCC1-207ENST00000427469 RIMBP3Q9UFD9 1639 aa23.52■■□□□ 1.36
RCC1-207ENST00000427469 SYNJ1O43426 1573 aa23.5■■□□□ 1.35
RCC1-207ENST00000427469 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
RCC1-207ENST00000427469 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
RCC1-207ENST00000427469 SNAPC4Q5SXM2 1469 aa23.48■■□□□ 1.35
RCC1-207ENST00000427469 MAGI1Q96QZ7 1491 aaPredicted RBP23.46■■□□□ 1.35
RCC1-207ENST00000427469 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
RCC1-207ENST00000427469 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
RCC1-207ENST00000427469 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
RCC1-207ENST00000427469 CLASP1Q7Z460 1538 aa23.39■■□□□ 1.34
RCC1-207ENST00000427469 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.34
RCC1-207ENST00000427469 SYNJ2O15056 1496 aa23.35■■□□□ 1.33
RCC1-207ENST00000427469 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
RCC1-207ENST00000427469 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
RCC1-207ENST00000427469 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
RCC1-207ENST00000427469 FBLN2P98095 1184 aa23.23■■□□□ 1.31
RCC1-207ENST00000427469 ERICH3Q5RHP9 1530 aa23.22■■□□□ 1.31
RCC1-207ENST00000427469 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
RCC1-207ENST00000427469 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
RCC1-207ENST00000427469 CEP170Q5SW79 1584 aa23.14■■□□□ 1.3
RCC1-207ENST00000427469 NUP160Q12769 1436 aa23.11■■□□□ 1.29
RCC1-207ENST00000427469 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
RCC1-207ENST00000427469 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
RCC1-207ENST00000427469 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
RCC1-207ENST00000427469 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
RCC1-207ENST00000427469 CUL7Q14999 1698 aa22.99■■□□□ 1.27
RCC1-207ENST00000427469 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
RCC1-207ENST00000427469 KIF27Q86VH2 1401 aa22.9■■□□□ 1.26
RCC1-207ENST00000427469 IGF1RP08069 1367 aa22.87■■□□□ 1.25
RCC1-207ENST00000427469 KIAA0586Q9BVV6 1533 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms