RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 KIAA0586Q9BVV6 1533 aa21.86■■□□□ 1.09
PMF1-201ENST00000368273 RAPGEF2Q9Y4G8 1499 aa21.86■■□□□ 1.09
PMF1-201ENST00000368273 JPH4Q96JJ6 628 aa21.86■■□□□ 1.09
PMF1-201ENST00000368273 ERCC6L2Q5T890 1561 aa21.85■■□□□ 1.09
PMF1-201ENST00000368273 PRG4Q92954 1404 aaPredicted RBP21.81■■□□□ 1.08
PMF1-201ENST00000368273 PRXQ9BXM0 1461 aa21.78■■□□□ 1.08
PMF1-201ENST00000368273 EEA1Q15075 1411 aa21.78■■□□□ 1.08
PMF1-201ENST00000368273 CSRNP3Q8WYN3 585 aa21.77■■□□□ 1.08
PMF1-201ENST00000368273 IQGAP2Q13576 1575 aa21.73■■□□□ 1.07
PMF1-201ENST00000368273 FAM9AQ8IZU1 332 aaPredicted RBP21.66■■□□□ 1.06
PMF1-201ENST00000368273 CTTNBP2Q8WZ74 1663 aa21.64■■□□□ 1.05
PMF1-201ENST00000368273 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
PMF1-201ENST00000368273 UGGT2Q9NYU1 1516 aa21.62■■□□□ 1.05
PMF1-201ENST00000368273 DISP1Q96F81 1524 aa21.59■■□□□ 1.05
PMF1-201ENST00000368273 TNIKQ9UKE5 1360 aa21.56■■□□□ 1.04
PMF1-201ENST00000368273 PTPRGP23470 1445 aa21.55■■□□□ 1.04
PMF1-201ENST00000368273 KIF21BO75037 1637 aa21.55■■□□□ 1.04
PMF1-201ENST00000368273 KIAA0556O60303 1618 aa21.52■■□□□ 1.04
PMF1-201ENST00000368273 GOLGA3Q08378 1498 aa21.5■■□□□ 1.03
PMF1-201ENST00000368273 TTBK1Q5TCY1 1321 aaPredicted RBP21.49■■□□□ 1.03
PMF1-201ENST00000368273 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
PMF1-201ENST00000368273 TRHP20396 242 aaPredicted RBP21.47■■□□□ 1.03
PMF1-201ENST00000368273 LOC105371045A0A1W2PR82 267 aa21.44■■□□□ 1.02
PMF1-201ENST00000368273 NPM1P06748 294 aaKnown RBP eCLIP21.43■■□□□ 1.02
PMF1-201ENST00000368273 UACAQ9BZF9 1416 aa21.4■■□□□ 1.02
PMF1-201ENST00000368273 UHRF1BP1LA0JNW5 1464 aa21.39■■□□□ 1.02
PMF1-201ENST00000368273 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
PMF1-201ENST00000368273 SAMD9Q5K651 1589 aa21.38■■□□□ 1.01
PMF1-201ENST00000368273 ABCC2Q92887 1545 aa21.36■■□□□ 1.01
PMF1-201ENST00000368273 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
PMF1-201ENST00000368273 MAPKBP1O60336 1514 aa21.35■■□□□ 1.01
PMF1-201ENST00000368273 P3H3Q8IVL6 736 aa21.35■■□□□ 1.01
PMF1-201ENST00000368273 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
PMF1-201ENST00000368273 PLB1Q6P1J6 1458 aa21.31■■□□□ 1
PMF1-201ENST00000368273 ABCA8O94911 1581 aa21.3■■□□□ 1
PMF1-201ENST00000368273 KDM5BQ9UGL1 1544 aa21.29■■□□□ 1
PMF1-201ENST00000368273 EFCAB5A4FU69 1503 aa21.28■■□□□ 1
PMF1-201ENST00000368273 ABCC10Q5T3U5 1492 aa21.26■□□□□ 0.99
PMF1-201ENST00000368273 KIF13AQ9H1H9 1805 aa21.25■□□□□ 0.99
PMF1-201ENST00000368273 FHOD3Q2V2M9 1422 aa21.24■□□□□ 0.99
PMF1-201ENST00000368273 ZCCHC11Q5TAX3 1644 aaKnown RBP21.23■□□□□ 0.99
PMF1-201ENST00000368273 ASXL2Q76L83 1435 aa21.22■□□□□ 0.99
PMF1-201ENST00000368273 FAM69CQ0P6D2 419 aa21.21■□□□□ 0.99
PMF1-201ENST00000368273 DIP2BQ9P265 1576 aa21.21■□□□□ 0.99
PMF1-201ENST00000368273 ARHGAP35Q9NRY4 1499 aa21.17■□□□□ 0.98
PMF1-201ENST00000368273 RAPGEF6Q8TEU7 1601 aa21.17■□□□□ 0.98
PMF1-201ENST00000368273 ATP10BO94823 1461 aa21.13■□□□□ 0.97
PMF1-201ENST00000368273 GLI2P10070 1586 aa21.11■□□□□ 0.97
PMF1-201ENST00000368273 WDR7Q9Y4E6 1490 aa21.11■□□□□ 0.97
PMF1-201ENST00000368273 EPRSP07814 1512 aaKnown RBP21.1■□□□□ 0.97
PMF1-201ENST00000368273 NUP153P49790 1475 aaKnown RBP21.1■□□□□ 0.97
PMF1-201ENST00000368273 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
PMF1-201ENST00000368273 FMN1Q68DA7 1419 aa21.08■□□□□ 0.97
PMF1-201ENST00000368273 CLIP1P30622 1438 aa21.04■□□□□ 0.96
PMF1-201ENST00000368273 TSPOAP1O95153 1857 aa21.03■□□□□ 0.96
PMF1-201ENST00000368273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
PMF1-201ENST00000368273 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
PMF1-201ENST00000368273 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
PMF1-201ENST00000368273 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
PMF1-201ENST00000368273 CEP162Q5TB80 1403 aa21■□□□□ 0.95
PMF1-201ENST00000368273 HECW1Q76N89 1606 aa20.97■□□□□ 0.95
PMF1-201ENST00000368273 PPRC1Q5VV67 1664 aaKnown RBP20.97■□□□□ 0.95
PMF1-201ENST00000368273 ATP1B4Q9UN42 357 aaPredicted RBP20.95■□□□□ 0.94
PMF1-201ENST00000368273 CFAP43Q8NDM7 1665 aa20.94■□□□□ 0.94
PMF1-201ENST00000368273 PLEKHD1A6NEE1 506 aa20.94■□□□□ 0.94
PMF1-201ENST00000368273 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
PMF1-201ENST00000368273 CD109Q6YHK3 1445 aa20.93■□□□□ 0.94
PMF1-201ENST00000368273 CASKIN1Q8WXD9 1431 aa20.92■□□□□ 0.94
PMF1-201ENST00000368273 TEX14Q8IWB6 1497 aa20.91■□□□□ 0.94
PMF1-201ENST00000368273 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.94
PMF1-201ENST00000368273 PCF11O94913 1555 aaKnown RBP20.89■□□□□ 0.94
PMF1-201ENST00000368273 MAGI3Q5TCQ9 1506 aa20.88■□□□□ 0.93
PMF1-201ENST00000368273 KDM6BO15054 1643 aa20.88■□□□□ 0.93
PMF1-201ENST00000368273 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
PMF1-201ENST00000368273 FYCO1Q9BQS8 1478 aa20.86■□□□□ 0.93
PMF1-201ENST00000368273 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
PMF1-201ENST00000368273 CCDC18Q5T9S5 1454 aa20.83■□□□□ 0.93
PMF1-201ENST00000368273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.79■□□□□ 0.92
PMF1-201ENST00000368273 COL17A1Q9UMD9 1497 aaPredicted RBP20.79■□□□□ 0.92
PMF1-201ENST00000368273 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
PMF1-201ENST00000368273 TTC37Q6PGP7 1564 aa20.76■□□□□ 0.91
PMF1-201ENST00000368273 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
PMF1-201ENST00000368273 KIF14Q15058 1648 aa20.73■□□□□ 0.91
PMF1-201ENST00000368273 NEO1Q92859 1461 aa20.73■□□□□ 0.91
PMF1-201ENST00000368273 ARAP3Q8WWN8 1544 aa20.72■□□□□ 0.91
PMF1-201ENST00000368273 PLCH2O75038 1416 aa20.69■□□□□ 0.9
PMF1-201ENST00000368273 VPS8Q8N3P4 1428 aa20.69■□□□□ 0.9
PMF1-201ENST00000368273 FANCAO15360 1455 aa20.68■□□□□ 0.9
PMF1-201ENST00000368273 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
PMF1-201ENST00000368273 MYO5CQ9NQX4 1742 aa20.66■□□□□ 0.9
PMF1-201ENST00000368273 AKNAQ7Z591 1439 aa20.65■□□□□ 0.9
PMF1-201ENST00000368273 MTUS2Q5JR59 1369 aa20.61■□□□□ 0.89
PMF1-201ENST00000368273 EFCAB2Q5VUJ9 269 aa20.61■□□□□ 0.89
PMF1-201ENST00000368273 RAPGEF3O95398 923 aa20.6■□□□□ 0.89
PMF1-201ENST00000368273 DENND4BO75064 1496 aaPredicted RBP20.58■□□□□ 0.89
PMF1-201ENST00000368273 ARHGAP5Q13017 1502 aa20.58■□□□□ 0.88
PMF1-201ENST00000368273 EHBP1L1Q8N3D4 1523 aa20.57■□□□□ 0.88
PMF1-201ENST00000368273 PREX2Q70Z35 1606 aa20.56■□□□□ 0.88
PMF1-201ENST00000368273 CDC42BPBQ9Y5S2 1711 aa20.56■□□□□ 0.88
PMF1-201ENST00000368273 TIAM1Q13009 1591 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms