RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.36□□□□□ -0.115e-26■■■■■ 153.1
PMF1-201ENST00000368273 DKC1O60832 514 aaKnown RBP eCLIP14.59□□□□□ -0.076e-15■■■■■ 44.9
PMF1-201ENST00000368273 PCBP1Q15365 356 aaKnown RBP eCLIP14.4□□□□□ -0.12e-11■■■■■ 65.5
PMF1-201ENST00000368273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.13□□□□□ -0.157e-11■■■■■ 48.1
PMF1-201ENST00000368273 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.2□□□□□ -0.34e-10■■□□□ 13.4
PMF1-201ENST00000368273 SF3B1O75533 1304 aaKnown RBP eCLIP14.15□□□□□ -0.155e-10■■■■■ 120.6
PMF1-201ENST00000368273 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.76□□□□□ -0.216e-9■■■■■ 30.1
PMF1-201ENST00000368273 PABPC4Q13310 644 aaKnown RBP eCLIP15.49■□□□□ 0.072e-8■■□□□ 14.1
PMF1-201ENST00000368273 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.94□□□□□ -0.183e-8■■■■■ 71.2
PMF1-201ENST00000368273 SF3B4Q15427 424 aaKnown RBP eCLIP11.77□□□□□ -0.533e-8■■■□□ 15.6
PMF1-201ENST00000368273 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.68□□□□□ -0.064e-8■■□□□ 13
PMF1-201ENST00000368273 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.229e-8■■■■■ 32
PMF1-201ENST00000368273 EFTUD2Q15029 972 aaKnown RBP eCLIP13.26□□□□□ -0.292e-7■■□□□ 13.6
PMF1-201ENST00000368273 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.96□□□□□ -0.653e-7■■□□□ 12.8
PMF1-201ENST00000368273 ZRANB2O95218 330 aaKnown RBP eCLIP13.73□□□□□ -0.213e-7■■■■■ 30.9
PMF1-201ENST00000368273 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.18■□□□□ 0.023e-7■■■■■ 42.1
PMF1-201ENST00000368273 ILF3Q12906 894 aaKnown RBP eCLIP12.88□□□□□ -0.354e-7■■■■□ 23.9
PMF1-201ENST00000368273 PPIGQ13427 754 aaKnown RBP eCLIP14.72□□□□□ -0.054e-7■■■□□ 15.2
PMF1-201ENST00000368273 LARP4Q71RC2 724 aaKnown RBP eCLIP12.73□□□□□ -0.377e-7■■■■□ 19.5
PMF1-201ENST00000368273 MATR3P43243 847 aaKnown RBP eCLIP14.27□□□□□ -0.131e-6■■■□□ 15
PMF1-201ENST00000368273 DDX6P26196 483 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■□□ 18.3
PMF1-201ENST00000368273 PCBP2Q15366 365 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■■□□□ 11.8
PMF1-201ENST00000368273 SSBP05455 408 aaKnown RBP eCLIP14.64□□□□□ -0.074e-6■□□□□ 10.9
PMF1-201ENST00000368273 RPS3P23396 243 aaKnown RBP eCLIP13.03□□□□□ -0.326e-6■■■□□ 17.9
PMF1-201ENST00000368273 NIP7Q9Y221 180 aaKnown RBP eCLIP16.8■□□□□ 0.287e-6■■■■■ 33.4
Retrieved 25 of 25 RNA–protein pairs in 18 ms