RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17bsnR17b PRP5P21372 849 aaPredicted RBP5.35□□□□□ -1.55
snR17bsnR17b CBP3P21560 335 aa5.35□□□□□ -1.55
snR17bsnR17b SEC14P24280 304 aaKnown RBP5.35□□□□□ -1.55
snR17bsnR17b PAP1P29468 568 aaKnown RBP5.35□□□□□ -1.55
snR17bsnR17b CNS1P33313 385 aa5.35□□□□□ -1.55
snR17bsnR17b YSW1P38280 609 aa5.35□□□□□ -1.55
snR17bsnR17b YMR147WP40218 223 aaKnown RBP5.35□□□□□ -1.55
snR17bsnR17b TRS85P46944 698 aa5.35□□□□□ -1.55
snR17bsnR17b YJR142WP47173 342 aa5.35□□□□□ -1.55
snR17bsnR17b CUE3P53137 624 aaKnown RBP5.35□□□□□ -1.55
snR17bsnR17b YNL193WP53870 558 aa5.35□□□□□ -1.55
snR17bsnR17b ALD3P54114 506 aa5.35□□□□□ -1.55
snR17bsnR17b ERG5P54781 538 aa5.35□□□□□ -1.55
snR17bsnR17b NUR1Q12066 484 aa5.35□□□□□ -1.55
snR17bsnR17b RRP6Q12149 733 aaKnown RBP5.35□□□□□ -1.55
snR17bsnR17b ARP8Q12386 881 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
snR17bsnR17b RMP1Q12530 201 aa5.35□□□□□ -1.55
snR17bsnR17b TOP1P04786 769 aa5.34□□□□□ -1.55
snR17bsnR17b CDC6P09119 513 aa5.34□□□□□ -1.55
snR17bsnR17b MPH3P0CE00 602 aa5.34□□□□□ -1.55
snR17bsnR17b SPO12P17123 173 aa5.34□□□□□ -1.55
snR17bsnR17b RAD57P25301 460 aa5.34□□□□□ -1.55
snR17bsnR17b PDB1P32473 366 aaKnown RBP5.34□□□□□ -1.55
snR17bsnR17b ISW1P38144 1129 aa5.34□□□□□ -1.55
snR17bsnR17b CTM1P38818 585 aa5.34□□□□□ -1.55
snR17bsnR17b AKR1P39010 764 aa5.34□□□□□ -1.55
snR17bsnR17b SHQ1P40486 507 aaPredicted RBP5.34□□□□□ -1.55
snR17bsnR17b YNL011CP53980 444 aa5.34□□□□□ -1.55
snR17bsnR17b FCP1Q03254 732 aa5.34□□□□□ -1.55
snR17bsnR17b PKH3Q03306 898 aaPredicted RBP5.34□□□□□ -1.55
snR17bsnR17b PKH1Q03407 766 aa5.34□□□□□ -1.55
snR17bsnR17b BNI1P41832 1953 aa5.33□□□□□ -1.56
snR17bsnR17b JIP3O13555 125 aa5.33□□□□□ -1.56
snR17bsnR17b CDC8P00572 216 aa5.33□□□□□ -1.56
snR17bsnR17b PMR1P13586 950 aa5.33□□□□□ -1.56
snR17bsnR17b KRS1P15180 591 aaKnown RBP5.33□□□□□ -1.56
snR17bsnR17b VPS1P21576 704 aaKnown RBP5.33□□□□□ -1.56
snR17bsnR17b SPO11P23179 398 aa5.33□□□□□ -1.56
snR17bsnR17b SWI4P25302 1093 aaKnown RBP5.33□□□□□ -1.56
snR17bsnR17b ZUO1P32527 433 aaKnown RBP5.33□□□□□ -1.56
snR17bsnR17b SRB4P32569 687 aa5.33□□□□□ -1.56
snR17bsnR17b CBF5P33322 483 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
snR17bsnR17b SKI2P35207 1287 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
snR17bsnR17b MET1P36150 593 aa5.33□□□□□ -1.56
snR17bsnR17b ALD2P47771 506 aa5.33□□□□□ -1.56
snR17bsnR17b MSB3P48566 633 aaPredicted RBP5.33□□□□□ -1.56
snR17bsnR17b YGR237CP50089 785 aa5.33□□□□□ -1.56
snR17bsnR17b TAN1P53072 289 aaPredicted RBP5.33□□□□□ -1.56
snR17bsnR17b FAR11P53917 953 aa5.33□□□□□ -1.56
snR17bsnR17b UBP16Q02863 499 aa5.33□□□□□ -1.56
snR17bsnR17b VPS30Q02948 557 aa5.33□□□□□ -1.56
snR17bsnR17b NGL3Q03210 505 aa5.33□□□□□ -1.56
snR17bsnR17b YLR271WQ06152 274 aa5.33□□□□□ -1.56
snR17bsnR17b EST2Q06163 884 aa5.33□□□□□ -1.56
snR17bsnR17b CSC1Q06538 782 aa5.33□□□□□ -1.56
snR17bsnR17b YLR001CQ07895 862 aa5.33□□□□□ -1.56
snR17bsnR17b MDM38Q08179 573 aa5.33□□□□□ -1.56
snR17bsnR17b YPR204WQ08995 1032 aa5.33□□□□□ -1.56
snR17bsnR17b SSF2Q12153 453 aaPredicted RBP5.33□□□□□ -1.56
snR17bsnR17b GET3Q12154 354 aaKnown RBP5.33□□□□□ -1.56
snR17bsnR17b SMC6Q12749 1114 aa5.33□□□□□ -1.56
snR17bsnR17b GAL11P19659 1081 aa5.32□□□□□ -1.56
snR17bsnR17b OSM1P21375 501 aaKnown RBP5.32□□□□□ -1.56
snR17bsnR17b ARG1P22768 420 aa5.32□□□□□ -1.56
snR17bsnR17b RAD51P25454 400 aa5.32□□□□□ -1.56
snR17bsnR17b BMH1P29311 267 aaKnown RBP5.32□□□□□ -1.56
snR17bsnR17b RER2P35196 286 aa5.32□□□□□ -1.56
snR17bsnR17b MIP6P38760 659 aaKnown RBP5.32□□□□□ -1.56
snR17bsnR17b CRG1P38892 291 aaRIP-Chip data5.32□□□□□ -1.56not detected
snR17bsnR17b MRX1P40050 688 aa5.32□□□□□ -1.56
snR17bsnR17b SEC26P41810 973 aaKnown RBP5.32□□□□□ -1.56
snR17bsnR17b LSC2P53312 427 aa5.32□□□□□ -1.56
snR17bsnR17b EBS1Q03466 884 aaKnown RBP5.32□□□□□ -1.56
snR17bsnR17b MTC5Q03897 1148 aa5.32□□□□□ -1.56
snR17bsnR17b EIS1Q05050 843 aaKnown RBP5.32□□□□□ -1.56
snR17bsnR17b YLR287CQ05881 355 aa5.32□□□□□ -1.56
snR17bsnR17b LCB5Q06147 687 aaKnown RBP5.32□□□□□ -1.56
snR17bsnR17b SPN1Q06505 410 aaPredicted RBP5.32□□□□□ -1.56
snR17bsnR17b SNU66Q12420 587 aaPredicted RBP5.32□□□□□ -1.56
snR17bsnR17b SUP35P05453 685 aaKnown RBP5.31□□□□□ -1.56
snR17bsnR17b CKI1P20485 582 aa5.31□□□□□ -1.56
snR17bsnR17b PRP45P28004 379 aaPredicted RBP5.31□□□□□ -1.56
snR17bsnR17b YME2P32843 850 aa5.31□□□□□ -1.56
snR17bsnR17b BMH2P34730 273 aaKnown RBP5.31□□□□□ -1.56
snR17bsnR17b YKR018CP36114 725 aa5.31□□□□□ -1.56
snR17bsnR17b YMR124WP39523 943 aaKnown RBP5.31□□□□□ -1.56
snR17bsnR17b TIF4632P39936 914 aaKnown RBP5.31□□□□□ -1.56
snR17bsnR17b PXA1P41909 870 aa5.31□□□□□ -1.56
snR17bsnR17b HFM1P51979 1187 aa5.31□□□□□ -1.56
snR17bsnR17b NNF2P53253 936 aa5.31□□□□□ -1.56
snR17bsnR17b UME1Q03010 460 aa5.31□□□□□ -1.56
snR17bsnR17b SPO19Q03029 223 aa5.31□□□□□ -1.56
snR17bsnR17b RMT2Q03305 412 aa5.31□□□□□ -1.56
snR17bsnR17b UTP5Q04177 643 aaKnown RBP5.31□□□□□ -1.56
snR17bsnR17b MMR1Q06324 491 aa5.31□□□□□ -1.56
snR17bsnR17b CMS1Q07897 291 aaKnown RBP5.31□□□□□ -1.56
snR17bsnR17b NEW1Q08972 1196 aaKnown RBP5.31□□□□□ -1.56
snR17bsnR17b TAH18Q12181 623 aa5.31□□□□□ -1.56
snR17bsnR17b PTC5Q12511 572 aa5.31□□□□□ -1.56
snR17bsnR17b YIL177CP40434 1758 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms