Protein–RNA interactions for Protein: P00572

CDC8, Thymidylate kinase, yeastyeast

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC8P00572 NSR1YGR159C 1245 nt21.18■□□□□ 0.98
CDC8P00572 YML009W-BYML009W-B 477 nt20.9■□□□□ 0.94
CDC8P00572 NOP1YDL014W 984 nt20.13■□□□□ 0.81
CDC8P00572 MDJ1YFL016C 1536 nt19.26■□□□□ 0.67
CDC8P00572 YKL036CYKL036C 393 nt18.1■□□□□ 0.49
CDC8P00572 YJL027CYJL027C 417 nt17.75■□□□□ 0.43
CDC8P00572 SRX1YKL086W 384 nt17.56■□□□□ 0.4
CDC8P00572 Q0297Q0297 156 nt17.44■□□□□ 0.38
CDC8P00572 DBP2YNL112W 1641 nt16.84■□□□□ 0.29
CDC8P00572 YCR051WYCR051W 669 nt16.64■□□□□ 0.25
CDC8P00572 YBR190WYBR190W 312 nt16.57■□□□□ 0.24
CDC8P00572 SCS3YGL126W 1143 nt16.21■□□□□ 0.19
CDC8P00572 RTC3YHR087W 336 nt16.19■□□□□ 0.18
CDC8P00572 TRN1tP(UGG)A 72 nt16.17■□□□□ 0.18
CDC8P00572 SUF9tP(UGG)F 72 nt16.17■□□□□ 0.18
CDC8P00572 SUF8tP(UGG)H 72 nt16.17■□□□□ 0.18
CDC8P00572 tP(UGG)LtP(UGG)L 72 nt16.17■□□□□ 0.18
CDC8P00572 SUF7tP(UGG)M 72 nt16.17■□□□□ 0.18
CDC8P00572 tP(UGG)N1tP(UGG)N1 72 nt16.17■□□□□ 0.18
CDC8P00572 tP(UGG)N2tP(UGG)N2 72 nt16.17■□□□□ 0.18
CDC8P00572 tP(UGG)O1tP(UGG)O1 72 nt16.17■□□□□ 0.18
CDC8P00572 SUF11tP(UGG)O2 72 nt16.17■□□□□ 0.18
CDC8P00572 CCC1YLR220W 969 nt16.01■□□□□ 0.15
CDC8P00572 RVS167YDR388W 1449 nt15.77■□□□□ 0.12
CDC8P00572 YOL085CYOL085C 342 nt15.68■□□□□ 0.1
CDC8P00572 RPP1BYDL130W 321 nt15.66■□□□□ 0.1
CDC8P00572 SSA3YBL075C 1950 nt15.56■□□□□ 0.08
CDC8P00572 SCJ1YMR214W 1134 nt15.54■□□□□ 0.08
CDC8P00572 PKP1YIL042C 1185 nt15.5■□□□□ 0.07
CDC8P00572 PUT4YOR348C 1884 nt15.41■□□□□ 0.06
CDC8P00572 tP(UGG)O3tP(UGG)O3 72 nt15.14■□□□□ 0.01
CDC8P00572 SHR5YOL110W 714 nt15.08■□□□□ 0
CDC8P00572 PET122YER153C 765 nt15□□□□□ -0.01
CDC8P00572 ARE1YCR048W 1833 nt14.99□□□□□ -0.01
CDC8P00572 URN1YPR152C 1398 nt14.96□□□□□ -0.02
CDC8P00572 POA1YBR022W 534 nt14.88□□□□□ -0.03
CDC8P00572 SAH1YER043C 1350 nt14.86□□□□□ -0.03
CDC8P00572 OPI9YLR338W 858 nt14.84□□□□□ -0.03
CDC8P00572 DEP1YAL013W 1218 nt14.8□□□□□ -0.04
CDC8P00572 YHR049C-AYHR049C-A 297 nt14.79□□□□□ -0.04
CDC8P00572 SCR1SCR1 522 nt14.74□□□□□ -0.05
CDC8P00572 BSC6YOL137W 1494 nt14.65□□□□□ -0.06
CDC8P00572 RPN10YHR200W 807 nt14.65□□□□□ -0.06
CDC8P00572 YDJ1YNL064C 1230 nt14.65□□□□□ -0.06
CDC8P00572 YNL208WYNL208W 600 nt14.53□□□□□ -0.08
CDC8P00572 RRN5YLR141W 1092 nt14.52□□□□□ -0.09
CDC8P00572 BUD23YCR047C 828 nt14.42□□□□□ -0.1
CDC8P00572 PUN1YLR414C 792 nt14.41□□□□□ -0.1
CDC8P00572 GAR1YHR089C 618 nt14.4□□□□□ -0.1
CDC8P00572 ATS1YAL020C 1002 nt14.36□□□□□ -0.11
CDC8P00572 SPT5YML010W 3192 nt14.33□□□□□ -0.12
CDC8P00572 PTC2YER089C 1395 nt14.32□□□□□ -0.12
CDC8P00572 YER088W-BYER088W-B 147 nt14.24□□□□□ -0.13
CDC8P00572 YJR018WYJR018W 363 nt14.24□□□□□ -0.13
CDC8P00572 NAB2YGL122C 1578 nt14.21□□□□□ -0.14
CDC8P00572 RSB1YOR049C 1065 nt14.09□□□□□ -0.15
CDC8P00572 SSA4YER103W 1929 nt14.05□□□□□ -0.16
CDC8P00572 TIR1YER011W 765 nt13.94□□□□□ -0.18
CDC8P00572 FIS1YIL065C 468 nt13.94□□□□□ -0.18
CDC8P00572 DAL1YIR027C 1383 nt13.93□□□□□ -0.18
CDC8P00572 FPR4YLR449W 1179 nt13.89□□□□□ -0.19
CDC8P00572 YJR120WYJR120W 351 nt13.88□□□□□ -0.19
CDC8P00572 SSA1YAL005C 1929 nt13.87□□□□□ -0.19
CDC8P00572 RPP2BYDR382W 333 nt13.85□□□□□ -0.19
CDC8P00572 MEP2YNL142W 1500 nt13.81□□□□□ -0.2
CDC8P00572 INM2YDR287W 879 nt13.8□□□□□ -0.2
CDC8P00572 PHO4YFR034C 939 nt13.79□□□□□ -0.2
CDC8P00572 YPS1YLR120C 1710 nt13.69□□□□□ -0.22
CDC8P00572 YBL100CYBL100C 315 nt13.59□□□□□ -0.23
CDC8P00572 YHR165W-AYHR165W-A 312 nt13.58□□□□□ -0.24
CDC8P00572 DCW1YKL046C 1350 nt13.58□□□□□ -0.24
CDC8P00572 BDF1YLR399C 2061 nt13.56□□□□□ -0.24
CDC8P00572 YDR095CYDR095C 411 nt13.52□□□□□ -0.25
CDC8P00572 SRB2YHR041C 633 nt13.5□□□□□ -0.25
CDC8P00572 BDH2YAL061W 1254 nt13.47□□□□□ -0.25
CDC8P00572 FUN26YAL022C 1554 nt13.41□□□□□ -0.26
CDC8P00572 EMI2YDR516C 1503 nt13.39□□□□□ -0.27
CDC8P00572 YMR090WYMR090W 684 nt13.38□□□□□ -0.27
CDC8P00572 PST2YDR032C 597 nt13.37□□□□□ -0.27
CDC8P00572 TAT1YBR069C 1860 nt13.37□□□□□ -0.27
CDC8P00572 ALF1YNL148C 765 nt13.33□□□□□ -0.28
CDC8P00572 TRM9YML014W 840 nt13.31□□□□□ -0.28
CDC8P00572 YBR220CYBR220C 1683 nt13.3□□□□□ -0.28
CDC8P00572 RPP2AYOL039W 321 nt13.27□□□□□ -0.29
CDC8P00572 YDL221WYDL221W 552 nt13.26□□□□□ -0.29
CDC8P00572 PTP1YDL230W 1008 nt13.24□□□□□ -0.29
CDC8P00572 WWM1YFL010C 636 nt13.24□□□□□ -0.29
CDC8P00572 CAC2YML102W 1407 nt13.23□□□□□ -0.29
CDC8P00572 LSM3YLR438C-A 270 nt13.21□□□□□ -0.29
CDC8P00572 SDH1YKL148C 1923 nt13.19□□□□□ -0.3
CDC8P00572 CCT6YDR188W 1641 nt13.19□□□□□ -0.3
CDC8P00572 SUF2tP(AGG)C 72 nt13.13□□□□□ -0.31
CDC8P00572 SUF10tP(AGG)N 72 nt13.13□□□□□ -0.31
CDC8P00572 SIS1YNL007C 1059 nt13.12□□□□□ -0.31
CDC8P00572 YFL021C-AYFL021C-A 855 nt13.05□□□□□ -0.32
CDC8P00572 SCC4YER147C 1875 nt13.05□□□□□ -0.32
CDC8P00572 YGR021WYGR021W 873 nt13.04□□□□□ -0.32
CDC8P00572 IRC15YPL017C 1500 nt13.03□□□□□ -0.32
CDC8P00572 GIS3YLR094C 1509 nt12.97□□□□□ -0.33
CDC8P00572 ART5YGR068C 1761 nt12.97□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms