Protein–RNA interactions for Protein: Q02863

UBP16, Ubiquitin carboxyl-terminal hydrolase 16, yeastyeast

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP16Q02863 YML009W-BYML009W-B 477 nt25.14■■□□□ 1.62
UBP16Q02863 NOP1YDL014W 984 nt24.51■■□□□ 1.51
UBP16Q02863 NSR1YGR159C 1245 nt24.44■■□□□ 1.5
UBP16Q02863 YKL036CYKL036C 393 nt23.13■■□□□ 1.29
UBP16Q02863 YJL027CYJL027C 417 nt21.71■■□□□ 1.07
UBP16Q02863 Q0297Q0297 156 nt21.64■■□□□ 1.05
UBP16Q02863 MDJ1YFL016C 1536 nt21.61■■□□□ 1.05
UBP16Q02863 SRX1YKL086W 384 nt21.45■■□□□ 1.02
UBP16Q02863 SCS3YGL126W 1143 nt21.34■■□□□ 1.01
UBP16Q02863 YCR051WYCR051W 669 nt20.47■□□□□ 0.87
UBP16Q02863 YOL085CYOL085C 342 nt20.04■□□□□ 0.8
UBP16Q02863 PKP1YIL042C 1185 nt19.77■□□□□ 0.76
UBP16Q02863 RPP1BYDL130W 321 nt19.44■□□□□ 0.7
UBP16Q02863 SCJ1YMR214W 1134 nt19.38■□□□□ 0.69
UBP16Q02863 DBP2YNL112W 1641 nt19.22■□□□□ 0.67
UBP16Q02863 ATS1YAL020C 1002 nt19.2■□□□□ 0.66
UBP16Q02863 TRN1tP(UGG)A 72 nt19.14■□□□□ 0.65
UBP16Q02863 SUF9tP(UGG)F 72 nt19.14■□□□□ 0.65
UBP16Q02863 SUF8tP(UGG)H 72 nt19.14■□□□□ 0.65
UBP16Q02863 tP(UGG)LtP(UGG)L 72 nt19.14■□□□□ 0.65
UBP16Q02863 SUF7tP(UGG)M 72 nt19.14■□□□□ 0.65
UBP16Q02863 tP(UGG)N1tP(UGG)N1 72 nt19.14■□□□□ 0.65
UBP16Q02863 tP(UGG)N2tP(UGG)N2 72 nt19.14■□□□□ 0.65
UBP16Q02863 tP(UGG)O1tP(UGG)O1 72 nt19.14■□□□□ 0.65
UBP16Q02863 SUF11tP(UGG)O2 72 nt19.14■□□□□ 0.65
UBP16Q02863 CCC1YLR220W 969 nt19.03■□□□□ 0.64
UBP16Q02863 PET122YER153C 765 nt18.58■□□□□ 0.56
UBP16Q02863 SCR1SCR1 522 nt18.43■□□□□ 0.54
UBP16Q02863 tP(UGG)O3tP(UGG)O3 72 nt18.28■□□□□ 0.52
UBP16Q02863 YBR190WYBR190W 312 nt18.24■□□□□ 0.51
UBP16Q02863 RRN5YLR141W 1092 nt18.08■□□□□ 0.48
UBP16Q02863 RVS167YDR388W 1449 nt17.98■□□□□ 0.47
UBP16Q02863 RTC3YHR087W 336 nt17.89■□□□□ 0.45
UBP16Q02863 RSB1YOR049C 1065 nt17.87■□□□□ 0.45
UBP16Q02863 YER088W-BYER088W-B 147 nt17.72■□□□□ 0.43
UBP16Q02863 PST2YDR032C 597 nt17.69■□□□□ 0.42
UBP16Q02863 YDJ1YNL064C 1230 nt17.62■□□□□ 0.41
UBP16Q02863 SHR5YOL110W 714 nt17.48■□□□□ 0.39
UBP16Q02863 YKL097CYKL097C 411 nt17.26■□□□□ 0.35
UBP16Q02863 GAR1YHR089C 618 nt17.25■□□□□ 0.35
UBP16Q02863 DEP1YAL013W 1218 nt16.98■□□□□ 0.31
UBP16Q02863 SHU1YHL006C 453 nt16.91■□□□□ 0.3
UBP16Q02863 URN1YPR152C 1398 nt16.85■□□□□ 0.29
UBP16Q02863 TIR1YER011W 765 nt16.61■□□□□ 0.25
UBP16Q02863 YNL208WYNL208W 600 nt16.61■□□□□ 0.25
UBP16Q02863 YAL037C-BYAL037C-B 975 nt16.56■□□□□ 0.24
UBP16Q02863 RPN10YHR200W 807 nt16.52■□□□□ 0.24
UBP16Q02863 OPI9YLR338W 858 nt16.52■□□□□ 0.24
UBP16Q02863 YOR139CYOR139C 393 nt16.52■□□□□ 0.24
UBP16Q02863 PUT4YOR348C 1884 nt16.48■□□□□ 0.23
UBP16Q02863 SAH1YER043C 1350 nt16.44■□□□□ 0.22
UBP16Q02863 SSA1YAL005C 1929 nt16.34■□□□□ 0.21
UBP16Q02863 ARE1YCR048W 1833 nt16.27■□□□□ 0.2
UBP16Q02863 SRB2YHR041C 633 nt16.24■□□□□ 0.19
UBP16Q02863 NPL3YDR432W 1245 nt16.23■□□□□ 0.19
UBP16Q02863 MNP1YGL068W 585 nt16.07■□□□□ 0.16
UBP16Q02863 YJR018WYJR018W 363 nt16.06■□□□□ 0.16
UBP16Q02863 YHR049C-AYHR049C-A 297 nt16.04■□□□□ 0.16
UBP16Q02863 WWM1YFL010C 636 nt16.01■□□□□ 0.15
UBP16Q02863 YJR120WYJR120W 351 nt16■□□□□ 0.15
UBP16Q02863 POA1YBR022W 534 nt16■□□□□ 0.15
UBP16Q02863 HOM6YJR139C 1080 nt15.99■□□□□ 0.15
UBP16Q02863 PUN1YLR414C 792 nt15.99■□□□□ 0.15
UBP16Q02863 YGR021WYGR021W 873 nt15.96■□□□□ 0.15
UBP16Q02863 YOL037CYOL037C 354 nt15.87■□□□□ 0.13
UBP16Q02863 PTC2YER089C 1395 nt15.85■□□□□ 0.13
UBP16Q02863 tM(CAU)CtM(CAU)C 72 nt15.81■□□□□ 0.12
UBP16Q02863 IMT4tM(CAU)E 72 nt15.81■□□□□ 0.12
UBP16Q02863 IMT3tM(CAU)J3 72 nt15.81■□□□□ 0.12
UBP16Q02863 IMT1tM(CAU)O1 72 nt15.81■□□□□ 0.12
UBP16Q02863 IMT2tM(CAU)P 72 nt15.81■□□□□ 0.12
UBP16Q02863 RPP2BYDR382W 333 nt15.75■□□□□ 0.11
UBP16Q02863 RKM5YLR137W 1104 nt15.75■□□□□ 0.11
UBP16Q02863 BUD23YCR047C 828 nt15.68■□□□□ 0.1
UBP16Q02863 YFL021C-AYFL021C-A 855 nt15.65■□□□□ 0.1
UBP16Q02863 SSA3YBL075C 1950 nt15.64■□□□□ 0.09
UBP16Q02863 BSC6YOL137W 1494 nt15.6■□□□□ 0.09
UBP16Q02863 NAB2YGL122C 1578 nt15.54■□□□□ 0.08
UBP16Q02863 PUS2YGL063W 1113 nt15.54■□□□□ 0.08
UBP16Q02863 BDH2YAL061W 1254 nt15.53■□□□□ 0.08
UBP16Q02863 YLR281CYLR281C 468 nt15.49■□□□□ 0.07
UBP16Q02863 FIS1YIL065C 468 nt15.46■□□□□ 0.07
UBP16Q02863 FPR4YLR449W 1179 nt15.43■□□□□ 0.06
UBP16Q02863 MOT3YMR070W 1473 nt15.4■□□□□ 0.06
UBP16Q02863 DAL1YIR027C 1383 nt15.4■□□□□ 0.06
UBP16Q02863 WHI5YOR083W 888 nt15.4■□□□□ 0.06
UBP16Q02863 INM2YDR287W 879 nt15.39■□□□□ 0.05
UBP16Q02863 LSM3YLR438C-A 270 nt15.38■□□□□ 0.05
UBP16Q02863 YBL100CYBL100C 315 nt15.35■□□□□ 0.05
UBP16Q02863 PHO4YFR034C 939 nt15.3■□□□□ 0.04
UBP16Q02863 FUN26YAL022C 1554 nt15.19■□□□□ 0.02
UBP16Q02863 YPR011CYPR011C 981 nt15.19■□□□□ 0.02
UBP16Q02863 FMP45YDL222C 930 nt15.18■□□□□ 0.02
UBP16Q02863 TRM9YML014W 840 nt15.15■□□□□ 0.02
UBP16Q02863 YLR236CYLR236C 324 nt15.13■□□□□ 0.01
UBP16Q02863 DSK2YMR276W 1122 nt15.11■□□□□ 0.01
UBP16Q02863 YLR154C-GYLR154C-G 150 nt15.02■□□□□ -0
UBP16Q02863 CCT6YDR188W 1641 nt15.01□□□□□ -0.01
UBP16Q02863 YCH1YGR203W 447 nt14.99□□□□□ -0.01
UBP16Q02863 IMP2'YIL154C 1041 nt14.94□□□□□ -0.02
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms