Protein–RNA interactions for Protein: P38280

YSW1, Spore-specific protein YSW1, yeastyeast

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YSW1P38280 YML009W-BYML009W-B 477 nt20.42■□□□□ 0.86
YSW1P38280 NSR1YGR159C 1245 nt20.28■□□□□ 0.84
YSW1P38280 NOP1YDL014W 984 nt19.84■□□□□ 0.77
YSW1P38280 MDJ1YFL016C 1536 nt18.64■□□□□ 0.58
YSW1P38280 YKL036CYKL036C 393 nt18.24■□□□□ 0.51
YSW1P38280 Q0297Q0297 156 nt17.29■□□□□ 0.36
YSW1P38280 SRX1YKL086W 384 nt17.29■□□□□ 0.36
YSW1P38280 YJL027CYJL027C 417 nt17.11■□□□□ 0.33
YSW1P38280 SCS3YGL126W 1143 nt16.56■□□□□ 0.24
YSW1P38280 YCR051WYCR051W 669 nt16.45■□□□□ 0.22
YSW1P38280 DBP2YNL112W 1641 nt16.17■□□□□ 0.18
YSW1P38280 YBR190WYBR190W 312 nt16.03■□□□□ 0.16
YSW1P38280 SSA3YBL075C 1950 nt15.86■□□□□ 0.13
YSW1P38280 YOL085CYOL085C 342 nt15.76■□□□□ 0.11
YSW1P38280 RTC3YHR087W 336 nt15.7■□□□□ 0.1
YSW1P38280 TRN1tP(UGG)A 72 nt15.65■□□□□ 0.1
YSW1P38280 SUF9tP(UGG)F 72 nt15.65■□□□□ 0.1
YSW1P38280 SUF8tP(UGG)H 72 nt15.65■□□□□ 0.1
YSW1P38280 tP(UGG)LtP(UGG)L 72 nt15.65■□□□□ 0.1
YSW1P38280 SUF7tP(UGG)M 72 nt15.65■□□□□ 0.1
YSW1P38280 tP(UGG)N1tP(UGG)N1 72 nt15.65■□□□□ 0.1
YSW1P38280 tP(UGG)N2tP(UGG)N2 72 nt15.65■□□□□ 0.1
YSW1P38280 tP(UGG)O1tP(UGG)O1 72 nt15.65■□□□□ 0.1
YSW1P38280 SUF11tP(UGG)O2 72 nt15.65■□□□□ 0.1
YSW1P38280 PKP1YIL042C 1185 nt15.56■□□□□ 0.08
YSW1P38280 CCC1YLR220W 969 nt15.55■□□□□ 0.08
YSW1P38280 RPP1BYDL130W 321 nt15.53■□□□□ 0.08
YSW1P38280 PUT4YOR348C 1884 nt15.11■□□□□ 0.01
YSW1P38280 RVS167YDR388W 1449 nt15.07■□□□□ 0
YSW1P38280 SCJ1YMR214W 1134 nt14.9□□□□□ -0.02
YSW1P38280 PET122YER153C 765 nt14.84□□□□□ -0.03
YSW1P38280 tP(UGG)O3tP(UGG)O3 72 nt14.8□□□□□ -0.04
YSW1P38280 ATS1YAL020C 1002 nt14.78□□□□□ -0.04
YSW1P38280 SCR1SCR1 522 nt14.73□□□□□ -0.05
YSW1P38280 ARE1YCR048W 1833 nt14.62□□□□□ -0.07
YSW1P38280 POA1YBR022W 534 nt14.62□□□□□ -0.07
YSW1P38280 SHR5YOL110W 714 nt14.48□□□□□ -0.09
YSW1P38280 YHR049C-AYHR049C-A 297 nt14.47□□□□□ -0.09
YSW1P38280 SAH1YER043C 1350 nt14.45□□□□□ -0.1
YSW1P38280 BSC6YOL137W 1494 nt14.43□□□□□ -0.1
YSW1P38280 URN1YPR152C 1398 nt14.41□□□□□ -0.1
YSW1P38280 RRN5YLR141W 1092 nt14.4□□□□□ -0.1
YSW1P38280 YDJ1YNL064C 1230 nt14.32□□□□□ -0.12
YSW1P38280 OPI9YLR338W 858 nt14.3□□□□□ -0.12
YSW1P38280 DEP1YAL013W 1218 nt14.24□□□□□ -0.13
YSW1P38280 SPT5YML010W 3192 nt14.22□□□□□ -0.13
YSW1P38280 RSB1YOR049C 1065 nt14.14□□□□□ -0.15
YSW1P38280 YER088W-BYER088W-B 147 nt14.11□□□□□ -0.15
YSW1P38280 SSA4YER103W 1929 nt14.11□□□□□ -0.15
YSW1P38280 BUD23YCR047C 828 nt14.1□□□□□ -0.15
YSW1P38280 GAR1YHR089C 618 nt14.03□□□□□ -0.16
YSW1P38280 RPN10YHR200W 807 nt14□□□□□ -0.17
YSW1P38280 PTC2YER089C 1395 nt13.89□□□□□ -0.19
YSW1P38280 PUN1YLR414C 792 nt13.89□□□□□ -0.19
YSW1P38280 YNL208WYNL208W 600 nt13.88□□□□□ -0.19
YSW1P38280 NAB2YGL122C 1578 nt13.77□□□□□ -0.21
YSW1P38280 YJR018WYJR018W 363 nt13.69□□□□□ -0.22
YSW1P38280 PST2YDR032C 597 nt13.67□□□□□ -0.22
YSW1P38280 BDF1YLR399C 2061 nt13.62□□□□□ -0.23
YSW1P38280 MEP2YNL142W 1500 nt13.59□□□□□ -0.23
YSW1P38280 TIR1YER011W 765 nt13.55□□□□□ -0.24
YSW1P38280 FIS1YIL065C 468 nt13.51□□□□□ -0.25
YSW1P38280 FPR4YLR449W 1179 nt13.47□□□□□ -0.25
YSW1P38280 DAL1YIR027C 1383 nt13.45□□□□□ -0.26
YSW1P38280 TAT1YBR069C 1860 nt13.41□□□□□ -0.26
YSW1P38280 DCW1YKL046C 1350 nt13.4□□□□□ -0.26
YSW1P38280 SSA1YAL005C 1929 nt13.37□□□□□ -0.27
YSW1P38280 PHO4YFR034C 939 nt13.34□□□□□ -0.27
YSW1P38280 YJR120WYJR120W 351 nt13.32□□□□□ -0.28
YSW1P38280 YPS1YLR120C 1710 nt13.32□□□□□ -0.28
YSW1P38280 INM2YDR287W 879 nt13.27□□□□□ -0.29
YSW1P38280 YHR165W-AYHR165W-A 312 nt13.25□□□□□ -0.29
YSW1P38280 RPP2BYDR382W 333 nt13.22□□□□□ -0.29
YSW1P38280 EMI2YDR516C 1503 nt13.18□□□□□ -0.3
YSW1P38280 YKL097CYKL097C 411 nt13.17□□□□□ -0.3
YSW1P38280 YBR220CYBR220C 1683 nt13.17□□□□□ -0.3
YSW1P38280 SHU1YHL006C 453 nt13.14□□□□□ -0.31
YSW1P38280 YMR090WYMR090W 684 nt13.14□□□□□ -0.31
YSW1P38280 PAC11YDR488C 1602 nt13.11□□□□□ -0.31
YSW1P38280 YDR095CYDR095C 411 nt13.11□□□□□ -0.31
YSW1P38280 SRB2YHR041C 633 nt13.09□□□□□ -0.31
YSW1P38280 YBL100CYBL100C 315 nt13.06□□□□□ -0.32
YSW1P38280 YDL221WYDL221W 552 nt13.01□□□□□ -0.33
YSW1P38280 SDH1YKL148C 1923 nt12.98□□□□□ -0.33
YSW1P38280 YAL037C-BYAL037C-B 975 nt12.98□□□□□ -0.33
YSW1P38280 CAC2YML102W 1407 nt12.96□□□□□ -0.34
YSW1P38280 WWM1YFL010C 636 nt12.94□□□□□ -0.34
YSW1P38280 PTP1YDL230W 1008 nt12.91□□□□□ -0.34
YSW1P38280 BDH2YAL061W 1254 nt12.9□□□□□ -0.34
YSW1P38280 RPP2AYOL039W 321 nt12.89□□□□□ -0.35
YSW1P38280 YGR021WYGR021W 873 nt12.88□□□□□ -0.35
YSW1P38280 FUN26YAL022C 1554 nt12.88□□□□□ -0.35
YSW1P38280 ALF1YNL148C 765 nt12.86□□□□□ -0.35
YSW1P38280 PCH2YBR186W 1695 nt12.84□□□□□ -0.35
YSW1P38280 SCC4YER147C 1875 nt12.82□□□□□ -0.36
YSW1P38280 HOM6YJR139C 1080 nt12.79□□□□□ -0.36
YSW1P38280 GUT2YIL155C 1950 nt12.79□□□□□ -0.36
YSW1P38280 SEC11YIR022W 504 nt12.77□□□□□ -0.37
YSW1P38280 IRC15YPL017C 1500 nt12.76□□□□□ -0.37
YSW1P38280 YFL021C-AYFL021C-A 855 nt12.75□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms