RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP5	YMR231W	CAJ1	P39101	391 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	ATG32	P40458	529 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	MSH4	P40965	878 aa	Predicted RBP	4.81	□□□□□ -1.64
PEP5	YMR231W	AIP1	P46680	615 aa	Known RBP	4.81	□□□□□ -1.64
PEP5	YMR231W	ADE16	P54113	591 aa	Known RBP	4.81	□□□□□ -1.64
PEP5	YMR231W	TMA16	Q08687	178 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
PEP5	YMR231W	REB1	P21538	810 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	CTM1	P38818	585 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	PES4	P39684	611 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	MAD1	P40957	749 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	ALE1	Q08548	619 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	GET3	Q12154	354 aa	Known RBP	4.81	□□□□□ -1.64
PEP5	YMR231W	PMR1	P13586	950 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	SET3	P36124	751 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	PCH2	P38126	564 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	CIC1	P38779	376 aa	Known RBP	4.81	□□□□□ -1.64
PEP5	YMR231W	GPD2	P41911	440 aa	Known RBP	4.81	□□□□□ -1.64
PEP5	YMR231W	BTN2	P53286	410 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	NAF1	P53919	492 aa	Known RBP	4.81	□□□□□ -1.64
PEP5	YMR231W	YOR223W	Q12015	292 aa		4.81	□□□□□ -1.64
PEP5	YMR231W	STO1	P34160	861 aa	Known RBP	4.8	□□□□□ -1.64
PEP5	YMR231W	HAL5	P38970	855 aa	Known RBP	4.8	□□□□□ -1.64
PEP5	YMR231W	PRY3	P47033	881 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	HFM1	P51979	1187 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	ZDS2	P54786	942 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	UBP16	Q02863	499 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	EEB1	Q02891	456 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	PRP16	P15938	1071 aa	Predicted RBP	4.8	□□□□□ -1.64
PEP5	YMR231W	MIF2	P35201	549 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	VFA1	P40080	203 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	GDE1	Q02979	1223 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	EST2	Q06163	884 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	TDA5	Q06417	326 aa	Known RBP	4.8	□□□□□ -1.64
PEP5	YMR231W	PTC5	Q12511	572 aa		4.8	□□□□□ -1.64
PEP5	YMR231W	FKS1	P38631	1876 aa	Known RBP	4.8	□□□□□ -1.64
PEP5	YMR231W	UBP1	P25037	809 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	SWI4	P25302	1093 aa	Known RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	SRB4	P32569	687 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	MYO3	P36006	1272 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	SDS3	P40505	327 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	TAN1	P53072	289 aa	Predicted RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	RBA50	Q04418	439 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	MAG2	Q06436	670 aa	Known RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	PPM2	Q08282	695 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	HXK1	P04806	485 aa	Known RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	PDC1	P06169	563 aa	Known RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	GRX1	P25373	110 aa	Known RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	NIP100	P33420	868 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	SAP190	P36123	1033 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	SHQ1	P40486	507 aa	Predicted RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	MIC19	P43594	170 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	RTC4	P53850	401 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	PRP3	Q03338	469 aa	Predicted RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	VTI1	Q04338	217 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	EIS1	Q05050	843 aa	Known RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	HCR1	Q05775	265 aa	Known RBP	4.79	□□□□□ -1.64
PEP5	YMR231W	FLO11	P08640	1367 aa		4.79	□□□□□ -1.64
PEP5	YMR231W	DCD1	P06773	312 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	TOM70	P07213	617 aa	Known RBP	4.78	□□□□□ -1.64
PEP5	YMR231W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
PEP5	YMR231W	RAD57	P25301	460 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	RER2	P35196	286 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	SHM1	P37292	490 aa	Predicted RBP	4.78	□□□□□ -1.64
PEP5	YMR231W	REI1	P38344	393 aa	Predicted RBP	4.78	□□□□□ -1.64
PEP5	YMR231W	YGL138C	P53122	345 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	UTP5	Q04177	643 aa	Known RBP	4.78	□□□□□ -1.64
PEP5	YMR231W	MMR1	Q06324	491 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	SWH1	P35845	1188 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	MIP6	P38760	659 aa	Known RBP	4.78	□□□□□ -1.64
PEP5	YMR231W	VID28	P40547	921 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	TAF10	Q12030	206 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	CKA2	P19454	339 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	YCR051W	P25631	222 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	RAD5	P32849	1169 aa	Predicted RBP	4.78	□□□□□ -1.64
PEP5	YMR231W	RPN10	P38886	268 aa	Known RBP	4.78	□□□□□ -1.64
PEP5	YMR231W	SIP5	P40210	489 aa	Known RBP	4.78	□□□□□ -1.64
PEP5	YMR231W	VPS30	Q02948	557 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	IRC3	Q06683	689 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	YOR296W	Q08748	1289 aa		4.78	□□□□□ -1.64
PEP5	YMR231W	FLO1	P32768	1537 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	MAK16	P10962	306 aa	Predicted RBP	4.77	□□□□□ -1.65
PEP5	YMR231W	MRPS28	P21771	286 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	CDC15	P27636	974 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	KIP2	P28743	706 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	RXT2	P38255	430 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	SPT8	P38915	602 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	MDJ2	P42834	146 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	HXT10	P43581	546 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	SFH1	Q06168	426 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	TOS4	Q06266	489 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	GPN2	Q08726	347 aa	Predicted RBP	4.77	□□□□□ -1.65
PEP5	YMR231W	YPL225W	Q08971	146 aa	Known RBP	4.77	□□□□□ -1.65
PEP5	YMR231W	TIP41	Q12199	356 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	CDC8	P00572	216 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	PYC1	P11154	1178 aa	Known RBP	4.77	□□□□□ -1.65
PEP5	YMR231W	GAL11	P19659	1081 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	SEC9	P40357	651 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	TRS85	P46944	698 aa		4.77	□□□□□ -1.65
PEP5	YMR231W	YGL081W	P53156	320 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms