Protein–RNA interactions for Protein: Q08971

YPL225W, Protein PBDC1 homolog, yeastyeast

Known RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL225WQ08971 NSR1YGR159C 1245 nt19.92■□□□□ 0.78
YPL225WQ08971 YML009W-BYML009W-B 477 nt19.34■□□□□ 0.69
YPL225WQ08971 MDJ1YFL016C 1536 nt18.54■□□□□ 0.56
YPL225WQ08971 NOP1YDL014W 984 nt18.4■□□□□ 0.54
YPL225WQ08971 YJL027CYJL027C 417 nt16.95■□□□□ 0.3
YPL225WQ08971 SSA3YBL075C 1950 nt16.27■□□□□ 0.19
YPL225WQ08971 YKL036CYKL036C 393 nt16.26■□□□□ 0.19
YPL225WQ08971 SRX1YKL086W 384 nt16.14■□□□□ 0.17
YPL225WQ08971 DBP2YNL112W 1641 nt16.11■□□□□ 0.17
YPL225WQ08971 YBR190WYBR190W 312 nt15.97■□□□□ 0.15
YPL225WQ08971 Q0297Q0297 156 nt15.91■□□□□ 0.14
YPL225WQ08971 RTC3YHR087W 336 nt15.53■□□□□ 0.08
YPL225WQ08971 PUT4YOR348C 1884 nt15.21■□□□□ 0.03
YPL225WQ08971 YCR051WYCR051W 669 nt15.21■□□□□ 0.03
YPL225WQ08971 TRN1tP(UGG)A 72 nt15.12■□□□□ 0.01
YPL225WQ08971 SUF9tP(UGG)F 72 nt15.12■□□□□ 0.01
YPL225WQ08971 SUF8tP(UGG)H 72 nt15.12■□□□□ 0.01
YPL225WQ08971 tP(UGG)LtP(UGG)L 72 nt15.12■□□□□ 0.01
YPL225WQ08971 SUF7tP(UGG)M 72 nt15.12■□□□□ 0.01
YPL225WQ08971 tP(UGG)N1tP(UGG)N1 72 nt15.12■□□□□ 0.01
YPL225WQ08971 tP(UGG)N2tP(UGG)N2 72 nt15.12■□□□□ 0.01
YPL225WQ08971 tP(UGG)O1tP(UGG)O1 72 nt15.12■□□□□ 0.01
YPL225WQ08971 SUF11tP(UGG)O2 72 nt15.12■□□□□ 0.01
YPL225WQ08971 CCC1YLR220W 969 nt14.9□□□□□ -0.02
YPL225WQ08971 RVS167YDR388W 1449 nt14.81□□□□□ -0.04
YPL225WQ08971 SCJ1YMR214W 1134 nt14.73□□□□□ -0.05
YPL225WQ08971 ARE1YCR048W 1833 nt14.68□□□□□ -0.06
YPL225WQ08971 POA1YBR022W 534 nt14.63□□□□□ -0.07
YPL225WQ08971 SPT5YML010W 3192 nt14.54□□□□□ -0.08
YPL225WQ08971 BSC6YOL137W 1494 nt14.5□□□□□ -0.09
YPL225WQ08971 YHR049C-AYHR049C-A 297 nt14.47□□□□□ -0.09
YPL225WQ08971 SCS3YGL126W 1143 nt14.42□□□□□ -0.1
YPL225WQ08971 SAH1YER043C 1350 nt14.39□□□□□ -0.11
YPL225WQ08971 SSA4YER103W 1929 nt14.37□□□□□ -0.11
YPL225WQ08971 URN1YPR152C 1398 nt14.28□□□□□ -0.12
YPL225WQ08971 RPP1BYDL130W 321 nt14.26□□□□□ -0.13
YPL225WQ08971 OPI9YLR338W 858 nt14.25□□□□□ -0.13
YPL225WQ08971 SHR5YOL110W 714 nt14.16□□□□□ -0.14
YPL225WQ08971 YOL085CYOL085C 342 nt14.14□□□□□ -0.15
YPL225WQ08971 DEP1YAL013W 1218 nt14.05□□□□□ -0.16
YPL225WQ08971 PKP1YIL042C 1185 nt14.04□□□□□ -0.16
YPL225WQ08971 BUD23YCR047C 828 nt14.01□□□□□ -0.17
YPL225WQ08971 tP(UGG)O3tP(UGG)O3 72 nt14.01□□□□□ -0.17
YPL225WQ08971 BDF1YLR399C 2061 nt13.94□□□□□ -0.18
YPL225WQ08971 RPN10YHR200W 807 nt13.8□□□□□ -0.2
YPL225WQ08971 PTC2YER089C 1395 nt13.8□□□□□ -0.2
YPL225WQ08971 PUN1YLR414C 792 nt13.79□□□□□ -0.2
YPL225WQ08971 PET122YER153C 765 nt13.77□□□□□ -0.21
YPL225WQ08971 TAT1YBR069C 1860 nt13.73□□□□□ -0.21
YPL225WQ08971 YNL208WYNL208W 600 nt13.71□□□□□ -0.21
YPL225WQ08971 NAB2YGL122C 1578 nt13.71□□□□□ -0.22
YPL225WQ08971 MEP2YNL142W 1500 nt13.69□□□□□ -0.22
YPL225WQ08971 YJR018WYJR018W 363 nt13.56□□□□□ -0.24
YPL225WQ08971 YDJ1YNL064C 1230 nt13.55□□□□□ -0.24
YPL225WQ08971 FIS1YIL065C 468 nt13.53□□□□□ -0.24
YPL225WQ08971 DCW1YKL046C 1350 nt13.48□□□□□ -0.25
YPL225WQ08971 PAC11YDR488C 1602 nt13.46□□□□□ -0.25
YPL225WQ08971 DAL1YIR027C 1383 nt13.38□□□□□ -0.27
YPL225WQ08971 GAR1YHR089C 618 nt13.37□□□□□ -0.27
YPL225WQ08971 YPS1YLR120C 1710 nt13.33□□□□□ -0.28
YPL225WQ08971 YBR220CYBR220C 1683 nt13.31□□□□□ -0.28
YPL225WQ08971 YJR120WYJR120W 351 nt13.31□□□□□ -0.28
YPL225WQ08971 FPR4YLR449W 1179 nt13.31□□□□□ -0.28
YPL225WQ08971 PHO4YFR034C 939 nt13.29□□□□□ -0.28
YPL225WQ08971 SCR1SCR1 522 nt13.29□□□□□ -0.28
YPL225WQ08971 RRN5YLR141W 1092 nt13.26□□□□□ -0.29
YPL225WQ08971 EMI2YDR516C 1503 nt13.24□□□□□ -0.29
YPL225WQ08971 YHR165W-AYHR165W-A 312 nt13.19□□□□□ -0.3
YPL225WQ08971 INM2YDR287W 879 nt13.15□□□□□ -0.3
YPL225WQ08971 YDR095CYDR095C 411 nt13.12□□□□□ -0.31
YPL225WQ08971 YMR090WYMR090W 684 nt13.12□□□□□ -0.31
YPL225WQ08971 NVJ2YPR091C 2313 nt13.1□□□□□ -0.31
YPL225WQ08971 SDH1YKL148C 1923 nt13.08□□□□□ -0.32
YPL225WQ08971 YDL221WYDL221W 552 nt13.08□□□□□ -0.32
YPL225WQ08971 SSA1YAL005C 1929 nt13.03□□□□□ -0.32
YPL225WQ08971 YER088W-BYER088W-B 147 nt13.01□□□□□ -0.33
YPL225WQ08971 PCH2YBR186W 1695 nt13□□□□□ -0.33
YPL225WQ08971 CAC2YML102W 1407 nt13□□□□□ -0.33
YPL225WQ08971 RPP2BYDR382W 333 nt13□□□□□ -0.33
YPL225WQ08971 GUT2YIL155C 1950 nt12.99□□□□□ -0.33
YPL225WQ08971 PTP1YDL230W 1008 nt12.96□□□□□ -0.33
YPL225WQ08971 TIR1YER011W 765 nt12.96□□□□□ -0.33
YPL225WQ08971 YBL100CYBL100C 315 nt12.92□□□□□ -0.34
YPL225WQ08971 SEC11YIR022W 504 nt12.87□□□□□ -0.35
YPL225WQ08971 SCC4YER147C 1875 nt12.87□□□□□ -0.35
YPL225WQ08971 RPP2AYOL039W 321 nt12.84□□□□□ -0.35
YPL225WQ08971 PIB2YGL023C 1908 nt12.83□□□□□ -0.36
YPL225WQ08971 IRC15YPL017C 1500 nt12.83□□□□□ -0.36
YPL225WQ08971 FUN26YAL022C 1554 nt12.76□□□□□ -0.37
YPL225WQ08971 SRB2YHR041C 633 nt12.75□□□□□ -0.37
YPL225WQ08971 GIS3YLR094C 1509 nt12.72□□□□□ -0.37
YPL225WQ08971 RSB1YOR049C 1065 nt12.71□□□□□ -0.37
YPL225WQ08971 YSC84YHR016C 1407 nt12.69□□□□□ -0.38
YPL225WQ08971 ALF1YNL148C 765 nt12.68□□□□□ -0.38
YPL225WQ08971 BDH2YAL061W 1254 nt12.66□□□□□ -0.38
YPL225WQ08971 ATS1YAL020C 1002 nt12.64□□□□□ -0.39
YPL225WQ08971 YHL050CYHL050C 2094 nt12.63□□□□□ -0.39
YPL225WQ08971 RTF1YGL244W 1677 nt12.6□□□□□ -0.39
YPL225WQ08971 SIS1YNL007C 1059 nt12.58□□□□□ -0.4
YPL225WQ08971 GFD2YCL036W 1701 nt12.54□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms