RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP1	YGR178C	GSY2	P27472	705 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	CDC15	P27636	974 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	MAL33	P38157	468 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	RGD1	P38339	666 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	VID28	P40547	921 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	BBC1	P47068	1157 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	MRPS35	P53292	345 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	PDR18	P53756	1333 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	MRP7	P12687	371 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	TPM1	P17536	199 aa	Known RBP	11.28	□□□□□ -0.6
PBP1	YGR178C	BYE1	P36106	594 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	YGL242C	P53066	181 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	YPL225W	Q08971	146 aa	Known RBP	11.28	□□□□□ -0.6
PBP1	YGR178C	MCM16	Q12262	181 aa		11.28	□□□□□ -0.6
PBP1	YGR178C	CTK3	P46963	296 aa	Predicted RBP	11.27	□□□□□ -0.6
PBP1	YGR178C	YPL150W	Q12152	901 aa		11.27	□□□□□ -0.6
PBP1	YGR178C	SRP54	P20424	541 aa	Known RBP	11.27	□□□□□ -0.61
PBP1	YGR178C	REI1	P38344	393 aa	Predicted RBP	11.27	□□□□□ -0.61
PBP1	YGR178C	SPT2	P06843	333 aa	Predicted RBP	11.26	□□□□□ -0.61
PBP1	YGR178C	RRP43	P25359	394 aa	Predicted RBP	11.26	□□□□□ -0.61
PBP1	YGR178C	RRP5	Q05022	1729 aa	Known RBP	11.26	□□□□□ -0.61
PBP1	YGR178C	TFG2	P41896	400 aa	Predicted RBP	11.26	□□□□□ -0.61
PBP1	YGR178C	APT1	P49435	187 aa	Known RBP	11.26	□□□□□ -0.61
PBP1	YGR178C	UBC1	P21734	215 aa	Known RBP	11.25	□□□□□ -0.61
PBP1	YGR178C	STE11	P23561	717 aa		11.25	□□□□□ -0.61
PBP1	YGR178C	SAP190	P36123	1033 aa		11.25	□□□□□ -0.61
PBP1	YGR178C	STR2	P47164	639 aa		11.25	□□□□□ -0.61
PBP1	YGR178C	YPT11	P48559	417 aa		11.25	□□□□□ -0.61
PBP1	YGR178C	YCG1	Q06680	1035 aa		11.25	□□□□□ -0.61
PBP1	YGR178C	BRE1	Q07457	700 aa	Known RBP	11.25	□□□□□ -0.61
PBP1	YGR178C	HGH1	P48362	394 aa	Known RBP	11.24	□□□□□ -0.61
PBP1	YGR178C	SWI1	P09547	1314 aa		11.24	□□□□□ -0.61
PBP1	YGR178C	VPS72	Q03388	795 aa		11.24	□□□□□ -0.61
PBP1	YGR178C	AOS1	Q06624	347 aa		11.24	□□□□□ -0.61
PBP1	YGR178C	YOL057W	Q08225	711 aa		11.24	□□□□□ -0.61
PBP1	YGR178C	PUS1	Q12211	544 aa	Known RBP	11.24	□□□□□ -0.61
PBP1	YGR178C	NCB2	Q92317	146 aa		11.24	□□□□□ -0.61
PBP1	YGR178C	RFC5	P38251	354 aa		11.23	□□□□□ -0.61
PBP1	YGR178C	SPO22	P40511	975 aa		11.23	□□□□□ -0.61
PBP1	YGR178C	OMS1	Q06668	471 aa		11.23	□□□□□ -0.61
PBP1	YGR178C	PSY4	P38193	441 aa		11.23	□□□□□ -0.61
PBP1	YGR178C	PGA3	Q12746	312 aa	Known RBP	11.23	□□□□□ -0.61
PBP1	YGR178C	RAD4	P14736	754 aa		11.22	□□□□□ -0.61
PBP1	YGR178C	SWI3	P32591	825 aa		11.22	□□□□□ -0.61
PBP1	YGR178C	PRP43	P53131	767 aa	Known RBP	11.22	□□□□□ -0.61
PBP1	YGR178C	PSK2	Q08217	1101 aa		11.22	□□□□□ -0.61
PBP1	YGR178C	ISW2	Q08773	1120 aa		11.22	□□□□□ -0.61
PBP1	YGR178C	CCT4	P39078	528 aa	Known RBP	11.21	□□□□□ -0.61
PBP1	YGR178C	CAJ1	P39101	391 aa		11.21	□□□□□ -0.61
PBP1	YGR178C	YIL177C	P40434	1758 aa		11.21	□□□□□ -0.62
PBP1	YGR178C	YJL225C	P40889	1758 aa		11.21	□□□□□ -0.62
PBP1	YGR178C	VPS75	P53853	264 aa		11.21	□□□□□ -0.62
PBP1	YGR178C	RRP1	P35178	278 aa	Predicted RBP	11.2	□□□□□ -0.62
PBP1	YGR178C	NDC80	P40460	691 aa		11.2	□□□□□ -0.62
PBP1	YGR178C	NSE3	Q05541	303 aa		11.2	□□□□□ -0.62
PBP1	YGR178C	VPS4	P52917	437 aa		11.2	□□□□□ -0.62
PBP1	YGR178C	CAF130	P53280	1122 aa	Predicted RBP	11.2	□□□□□ -0.62
PBP1	YGR178C	ALO1	P54783	526 aa	Known RBP	11.2	□□□□□ -0.62
PBP1	YGR178C	SEC9	P40357	651 aa		11.19	□□□□□ -0.62
PBP1	YGR178C	PIB2	P53191	635 aa		11.19	□□□□□ -0.62
PBP1	YGR178C	SFH1	Q06168	426 aa		11.19	□□□□□ -0.62
PBP1	YGR178C	YDR306C	Q06640	478 aa		11.19	□□□□□ -0.62
PBP1	YGR178C	TMA16	Q08687	178 aa		11.19	□□□□□ -0.62
PBP1	YGR178C	DPB3	P27344	201 aa		11.18	□□□□□ -0.62
PBP1	YGR178C	ECM32	P32644	1121 aa	Known RBP	11.18	□□□□□ -0.62
PBP1	YGR178C	STO1	P34160	861 aa	Known RBP	11.18	□□□□□ -0.62
PBP1	YGR178C	YNL011C	P53980	444 aa		11.18	□□□□□ -0.62
PBP1	YGR178C	ZDS2	P54786	942 aa		11.18	□□□□□ -0.62
PBP1	YGR178C	URB1	P34241	1764 aa	Known RBP	11.18	□□□□□ -0.62
PBP1	YGR178C	PDC1	P06169	563 aa	Known RBP	11.18	□□□□□ -0.62
PBP1	YGR178C	RPO26	P20435	155 aa		11.18	□□□□□ -0.62
PBP1	YGR178C	KTR1	P27810	393 aa	Known RBP	11.18	□□□□□ -0.62
PBP1	YGR178C	YHL017W	P38745	532 aa		11.18	□□□□□ -0.62
PBP1	YGR178C	CIC1	P38779	376 aa	Known RBP	11.18	□□□□□ -0.62
PBP1	YGR178C	SEC39	Q12745	709 aa		11.18	□□□□□ -0.62
PBP1	YGR178C	NUP133	P36161	1157 aa		11.17	□□□□□ -0.62
PBP1	YGR178C	HOT1	Q03213	719 aa		11.17	□□□□□ -0.62
PBP1	YGR178C	ATG23	Q06671	453 aa		11.17	□□□□□ -0.62
PBP1	YGR178C	STM1	P39015	273 aa	Known RBP	11.17	□□□□□ -0.62
PBP1	YGR178C	MLC1	P53141	149 aa		11.17	□□□□□ -0.62
PBP1	YGR178C	UGA3	P26370	528 aa		11.16	□□□□□ -0.62
PBP1	YGR178C	MUD2	P36084	527 aa	Known RBP	11.16	□□□□□ -0.62
PBP1	YGR178C	KTR3	P38130	404 aa	Predicted RBP	11.16	□□□□□ -0.62
PBP1	YGR178C	BUD6	P41697	788 aa		11.16	□□□□□ -0.62
PBP1	YGR178C	RUD3	Q12234	484 aa	Known RBP	11.16	□□□□□ -0.62
PBP1	YGR178C	YOL098C	Q12496	1037 aa		11.16	□□□□□ -0.62
PBP1	YGR178C	YKT6	P36015	200 aa	Known RBP	11.16	□□□□□ -0.62
PBP1	YGR178C	SPT8	P38915	602 aa		11.16	□□□□□ -0.62
PBP1	YGR178C	SDH5	Q08230	162 aa		11.16	□□□□□ -0.62
PBP1	YGR178C	SPT5	P27692	1063 aa	Known RBP	11.15	□□□□□ -0.62
PBP1	YGR178C	MCM4	P30665	933 aa	Known RBP	11.15	□□□□□ -0.62
PBP1	YGR178C	YOR223W	Q12015	292 aa		11.15	□□□□□ -0.62
PBP1	YGR178C	YKE2	P52553	114 aa		11.14	□□□□□ -0.63
PBP1	YGR178C	MAL13	P53338	473 aa		11.14	□□□□□ -0.63
PBP1	YGR178C	YDR338C	Q05497	695 aa		11.14	□□□□□ -0.63
PBP1	YGR178C	ATG9	Q12142	997 aa		11.14	□□□□□ -0.63
PBP1	YGR178C	HUL4	P40985	892 aa		11.13	□□□□□ -0.63
PBP1	YGR178C	PHO13	P19881	312 aa		11.13	□□□□□ -0.63
PBP1	YGR178C	SLA1	P32790	1244 aa		11.13	□□□□□ -0.63
PBP1	YGR178C	RIO2	P40160	425 aa	Known RBP	11.13	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms