Protein–RNA interactions for Protein: Q06680

YCG1, Condensin complex subunit 3, yeastyeast

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCG1Q06680 NSR1YGR159C 1245 nt22.02■■□□□ 1.12
YCG1Q06680 YML009W-BYML009W-B 477 nt21.75■■□□□ 1.07
YCG1Q06680 NOP1YDL014W 984 nt20.97■□□□□ 0.95
YCG1Q06680 MDJ1YFL016C 1536 nt19.98■□□□□ 0.79
YCG1Q06680 YKL036CYKL036C 393 nt19.24■□□□□ 0.67
YCG1Q06680 YJL027CYJL027C 417 nt18.41■□□□□ 0.54
YCG1Q06680 SRX1YKL086W 384 nt18.31■□□□□ 0.52
YCG1Q06680 Q0297Q0297 156 nt18.2■□□□□ 0.5
YCG1Q06680 SCS3YGL126W 1143 nt17.6■□□□□ 0.41
YCG1Q06680 DBP2YNL112W 1641 nt17.47■□□□□ 0.39
YCG1Q06680 YCR051WYCR051W 669 nt17.35■□□□□ 0.37
YCG1Q06680 YBR190WYBR190W 312 nt17.16■□□□□ 0.34
YCG1Q06680 TRN1tP(UGG)A 72 nt16.82■□□□□ 0.28
YCG1Q06680 SUF9tP(UGG)F 72 nt16.82■□□□□ 0.28
YCG1Q06680 SUF8tP(UGG)H 72 nt16.82■□□□□ 0.28
YCG1Q06680 tP(UGG)LtP(UGG)L 72 nt16.82■□□□□ 0.28
YCG1Q06680 SUF7tP(UGG)M 72 nt16.82■□□□□ 0.28
YCG1Q06680 tP(UGG)N1tP(UGG)N1 72 nt16.82■□□□□ 0.28
YCG1Q06680 tP(UGG)N2tP(UGG)N2 72 nt16.82■□□□□ 0.28
YCG1Q06680 tP(UGG)O1tP(UGG)O1 72 nt16.82■□□□□ 0.28
YCG1Q06680 SUF11tP(UGG)O2 72 nt16.82■□□□□ 0.28
YCG1Q06680 RTC3YHR087W 336 nt16.77■□□□□ 0.28
YCG1Q06680 CCC1YLR220W 969 nt16.66■□□□□ 0.26
YCG1Q06680 YOL085CYOL085C 342 nt16.61■□□□□ 0.25
YCG1Q06680 RVS167YDR388W 1449 nt16.36■□□□□ 0.21
YCG1Q06680 RPP1BYDL130W 321 nt16.33■□□□□ 0.2
YCG1Q06680 PKP1YIL042C 1185 nt16.27■□□□□ 0.2
YCG1Q06680 SCJ1YMR214W 1134 nt16.16■□□□□ 0.18
YCG1Q06680 SSA3YBL075C 1950 nt15.95■□□□□ 0.14
YCG1Q06680 PUT4YOR348C 1884 nt15.91■□□□□ 0.14
YCG1Q06680 ATS1YAL020C 1002 nt15.86■□□□□ 0.13
YCG1Q06680 tP(UGG)O3tP(UGG)O3 72 nt15.76■□□□□ 0.11
YCG1Q06680 SHR5YOL110W 714 nt15.67■□□□□ 0.1
YCG1Q06680 PET122YER153C 765 nt15.66■□□□□ 0.1
YCG1Q06680 URN1YPR152C 1398 nt15.51■□□□□ 0.07
YCG1Q06680 ARE1YCR048W 1833 nt15.49■□□□□ 0.07
YCG1Q06680 SCR1SCR1 522 nt15.43■□□□□ 0.06
YCG1Q06680 SAH1YER043C 1350 nt15.4■□□□□ 0.06
YCG1Q06680 OPI9YLR338W 858 nt15.39■□□□□ 0.05
YCG1Q06680 POA1YBR022W 534 nt15.39■□□□□ 0.05
YCG1Q06680 DEP1YAL013W 1218 nt15.38■□□□□ 0.05
YCG1Q06680 YHR049C-AYHR049C-A 297 nt15.31■□□□□ 0.04
YCG1Q06680 YDJ1YNL064C 1230 nt15.27■□□□□ 0.04
YCG1Q06680 RPN10YHR200W 807 nt15.2■□□□□ 0.02
YCG1Q06680 RRN5YLR141W 1092 nt15.16■□□□□ 0.02
YCG1Q06680 BSC6YOL137W 1494 nt15.15■□□□□ 0.02
YCG1Q06680 YNL208WYNL208W 600 nt15.09■□□□□ 0.01
YCG1Q06680 GAR1YHR089C 618 nt14.99□□□□□ -0.01
YCG1Q06680 PUN1YLR414C 792 nt14.94□□□□□ -0.02
YCG1Q06680 BUD23YCR047C 828 nt14.92□□□□□ -0.02
YCG1Q06680 YER088W-BYER088W-B 147 nt14.86□□□□□ -0.03
YCG1Q06680 PTC2YER089C 1395 nt14.83□□□□□ -0.04
YCG1Q06680 RSB1YOR049C 1065 nt14.81□□□□□ -0.04
YCG1Q06680 YJR018WYJR018W 363 nt14.78□□□□□ -0.04
YCG1Q06680 SPT5YML010W 3192 nt14.73□□□□□ -0.05
YCG1Q06680 NAB2YGL122C 1578 nt14.7□□□□□ -0.06
YCG1Q06680 PST2YDR032C 597 nt14.62□□□□□ -0.07
YCG1Q06680 TIR1YER011W 765 nt14.52□□□□□ -0.09
YCG1Q06680 SSA4YER103W 1929 nt14.45□□□□□ -0.1
YCG1Q06680 FIS1YIL065C 468 nt14.44□□□□□ -0.1
YCG1Q06680 YJR120WYJR120W 351 nt14.44□□□□□ -0.1
YCG1Q06680 DAL1YIR027C 1383 nt14.42□□□□□ -0.1
YCG1Q06680 SSA1YAL005C 1929 nt14.42□□□□□ -0.1
YCG1Q06680 FPR4YLR449W 1179 nt14.39□□□□□ -0.11
YCG1Q06680 RPP2BYDR382W 333 nt14.36□□□□□ -0.11
YCG1Q06680 INM2YDR287W 879 nt14.32□□□□□ -0.12
YCG1Q06680 PHO4YFR034C 939 nt14.28□□□□□ -0.12
YCG1Q06680 MEP2YNL142W 1500 nt14.26□□□□□ -0.13
YCG1Q06680 YKL097CYKL097C 411 nt14.24□□□□□ -0.13
YCG1Q06680 YPS1YLR120C 1710 nt14.16□□□□□ -0.14
YCG1Q06680 YBL100CYBL100C 315 nt14.1□□□□□ -0.15
YCG1Q06680 SRB2YHR041C 633 nt14.08□□□□□ -0.16
YCG1Q06680 YHR165W-AYHR165W-A 312 nt14.05□□□□□ -0.16
YCG1Q06680 DCW1YKL046C 1350 nt14.03□□□□□ -0.16
YCG1Q06680 YDR095CYDR095C 411 nt14.01□□□□□ -0.17
YCG1Q06680 BDH2YAL061W 1254 nt13.99□□□□□ -0.17
YCG1Q06680 SHU1YHL006C 453 nt13.92□□□□□ -0.18
YCG1Q06680 FUN26YAL022C 1554 nt13.92□□□□□ -0.18
YCG1Q06680 BDF1YLR399C 2061 nt13.91□□□□□ -0.18
YCG1Q06680 EMI2YDR516C 1503 nt13.85□□□□□ -0.19
YCG1Q06680 ALF1YNL148C 765 nt13.83□□□□□ -0.2
YCG1Q06680 TRM9YML014W 840 nt13.81□□□□□ -0.2
YCG1Q06680 WWM1YFL010C 636 nt13.8□□□□□ -0.2
YCG1Q06680 YMR090WYMR090W 684 nt13.8□□□□□ -0.2
YCG1Q06680 RPP2AYOL039W 321 nt13.75□□□□□ -0.21
YCG1Q06680 PTP1YDL230W 1008 nt13.73□□□□□ -0.21
YCG1Q06680 LSM3YLR438C-A 270 nt13.73□□□□□ -0.21
YCG1Q06680 TAT1YBR069C 1860 nt13.73□□□□□ -0.21
YCG1Q06680 YBR220CYBR220C 1683 nt13.72□□□□□ -0.21
YCG1Q06680 YDL221WYDL221W 552 nt13.71□□□□□ -0.21
YCG1Q06680 CAC2YML102W 1407 nt13.7□□□□□ -0.22
YCG1Q06680 CCT6YDR188W 1641 nt13.68□□□□□ -0.22
YCG1Q06680 SDH1YKL148C 1923 nt13.62□□□□□ -0.23
YCG1Q06680 SUF2tP(AGG)C 72 nt13.61□□□□□ -0.23
YCG1Q06680 SUF10tP(AGG)N 72 nt13.61□□□□□ -0.23
YCG1Q06680 SIS1YNL007C 1059 nt13.61□□□□□ -0.23
YCG1Q06680 YFL021C-AYFL021C-A 855 nt13.59□□□□□ -0.23
YCG1Q06680 YGR021WYGR021W 873 nt13.58□□□□□ -0.24
YCG1Q06680 YAL037C-BYAL037C-B 975 nt13.58□□□□□ -0.24
YCG1Q06680 YOR139CYOR139C 393 nt13.54□□□□□ -0.24
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms