Protein–RNA interactions for Protein: P09547

SWI1, SWI/SNF chromatin-remodeling complex subunit SWI1, yeastyeast

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWI1P09547 YML009W-BYML009W-B 477 nt25.44■■□□□ 1.66
SWI1P09547 NSR1YGR159C 1245 nt24.96■■□□□ 1.59
SWI1P09547 NOP1YDL014W 984 nt24.68■■□□□ 1.54
SWI1P09547 YKL036CYKL036C 393 nt23.05■■□□□ 1.28
SWI1P09547 MDJ1YFL016C 1536 nt22.14■■□□□ 1.13
SWI1P09547 Q0297Q0297 156 nt21.71■■□□□ 1.07
SWI1P09547 SRX1YKL086W 384 nt21.62■■□□□ 1.05
SWI1P09547 YJL027CYJL027C 417 nt21.57■■□□□ 1.04
SWI1P09547 SCS3YGL126W 1143 nt21.15■□□□□ 0.98
SWI1P09547 YCR051WYCR051W 669 nt20.58■□□□□ 0.89
SWI1P09547 YOL085CYOL085C 342 nt19.99■□□□□ 0.79
SWI1P09547 PKP1YIL042C 1185 nt19.75■□□□□ 0.75
SWI1P09547 DBP2YNL112W 1641 nt19.65■□□□□ 0.74
SWI1P09547 RPP1BYDL130W 321 nt19.51■□□□□ 0.71
SWI1P09547 TRN1tP(UGG)A 72 nt19.46■□□□□ 0.71
SWI1P09547 SUF9tP(UGG)F 72 nt19.46■□□□□ 0.71
SWI1P09547 SUF8tP(UGG)H 72 nt19.46■□□□□ 0.71
SWI1P09547 tP(UGG)LtP(UGG)L 72 nt19.46■□□□□ 0.71
SWI1P09547 SUF7tP(UGG)M 72 nt19.46■□□□□ 0.71
SWI1P09547 tP(UGG)N1tP(UGG)N1 72 nt19.46■□□□□ 0.71
SWI1P09547 tP(UGG)N2tP(UGG)N2 72 nt19.46■□□□□ 0.71
SWI1P09547 tP(UGG)O1tP(UGG)O1 72 nt19.46■□□□□ 0.71
SWI1P09547 SUF11tP(UGG)O2 72 nt19.46■□□□□ 0.71
SWI1P09547 CCC1YLR220W 969 nt19.31■□□□□ 0.68
SWI1P09547 ATS1YAL020C 1002 nt18.94■□□□□ 0.62
SWI1P09547 SCJ1YMR214W 1134 nt18.85■□□□□ 0.61
SWI1P09547 PET122YER153C 765 nt18.69■□□□□ 0.58
SWI1P09547 YBR190WYBR190W 312 nt18.68■□□□□ 0.58
SWI1P09547 tP(UGG)O3tP(UGG)O3 72 nt18.49■□□□□ 0.55
SWI1P09547 SCR1SCR1 522 nt18.43■□□□□ 0.54
SWI1P09547 RVS167YDR388W 1449 nt18.4■□□□□ 0.54
SWI1P09547 RTC3YHR087W 336 nt18.34■□□□□ 0.53
SWI1P09547 RRN5YLR141W 1092 nt18.13■□□□□ 0.49
SWI1P09547 SHR5YOL110W 714 nt17.85■□□□□ 0.45
SWI1P09547 RSB1YOR049C 1065 nt17.84■□□□□ 0.45
SWI1P09547 YDJ1YNL064C 1230 nt17.81■□□□□ 0.44
SWI1P09547 YER088W-BYER088W-B 147 nt17.79■□□□□ 0.44
SWI1P09547 PST2YDR032C 597 nt17.48■□□□□ 0.39
SWI1P09547 GAR1YHR089C 618 nt17.47■□□□□ 0.39
SWI1P09547 DEP1YAL013W 1218 nt17.39■□□□□ 0.37
SWI1P09547 URN1YPR152C 1398 nt17.27■□□□□ 0.35
SWI1P09547 YNL208WYNL208W 600 nt17.01■□□□□ 0.31
SWI1P09547 RPN10YHR200W 807 nt16.96■□□□□ 0.3
SWI1P09547 OPI9YLR338W 858 nt16.93■□□□□ 0.3
SWI1P09547 YKL097CYKL097C 411 nt16.92■□□□□ 0.3
SWI1P09547 PUT4YOR348C 1884 nt16.86■□□□□ 0.29
SWI1P09547 TIR1YER011W 765 nt16.84■□□□□ 0.29
SWI1P09547 SAH1YER043C 1350 nt16.84■□□□□ 0.29
SWI1P09547 SHU1YHL006C 453 nt16.79■□□□□ 0.28
SWI1P09547 SSA1YAL005C 1929 nt16.65■□□□□ 0.26
SWI1P09547 ARE1YCR048W 1833 nt16.64■□□□□ 0.25
SWI1P09547 SRB2YHR041C 633 nt16.53■□□□□ 0.24
SWI1P09547 YAL037C-BYAL037C-B 975 nt16.52■□□□□ 0.24
SWI1P09547 YHR049C-AYHR049C-A 297 nt16.45■□□□□ 0.22
SWI1P09547 YJR018WYJR018W 363 nt16.45■□□□□ 0.22
SWI1P09547 PUN1YLR414C 792 nt16.41■□□□□ 0.22
SWI1P09547 POA1YBR022W 534 nt16.38■□□□□ 0.21
SWI1P09547 YJR120WYJR120W 351 nt16.36■□□□□ 0.21
SWI1P09547 YOR139CYOR139C 393 nt16.26■□□□□ 0.19
SWI1P09547 PTC2YER089C 1395 nt16.22■□□□□ 0.19
SWI1P09547 WWM1YFL010C 636 nt16.19■□□□□ 0.18
SWI1P09547 MNP1YGL068W 585 nt16.14■□□□□ 0.17
SWI1P09547 RPP2BYDR382W 333 nt16.13■□□□□ 0.17
SWI1P09547 BUD23YCR047C 828 nt16.09■□□□□ 0.17
SWI1P09547 HOM6YJR139C 1080 nt16.08■□□□□ 0.16
SWI1P09547 YGR021WYGR021W 873 nt16.05■□□□□ 0.16
SWI1P09547 SSA3YBL075C 1950 nt16.01■□□□□ 0.15
SWI1P09547 NPL3YDR432W 1245 nt16.01■□□□□ 0.15
SWI1P09547 BSC6YOL137W 1494 nt15.98■□□□□ 0.15
SWI1P09547 NAB2YGL122C 1578 nt15.93■□□□□ 0.14
SWI1P09547 BDH2YAL061W 1254 nt15.88■□□□□ 0.13
SWI1P09547 RKM5YLR137W 1104 nt15.85■□□□□ 0.13
SWI1P09547 YFL021C-AYFL021C-A 855 nt15.84■□□□□ 0.13
SWI1P09547 FIS1YIL065C 468 nt15.84■□□□□ 0.13
SWI1P09547 FPR4YLR449W 1179 nt15.82■□□□□ 0.12
SWI1P09547 YOL037CYOL037C 354 nt15.81■□□□□ 0.12
SWI1P09547 DAL1YIR027C 1383 nt15.78■□□□□ 0.12
SWI1P09547 INM2YDR287W 879 nt15.76■□□□□ 0.11
SWI1P09547 YBL100CYBL100C 315 nt15.74■□□□□ 0.11
SWI1P09547 PHO4YFR034C 939 nt15.68■□□□□ 0.1
SWI1P09547 LSM3YLR438C-A 270 nt15.66■□□□□ 0.1
SWI1P09547 tM(CAU)CtM(CAU)C 72 nt15.58■□□□□ 0.08
SWI1P09547 IMT4tM(CAU)E 72 nt15.58■□□□□ 0.08
SWI1P09547 IMT3tM(CAU)J3 72 nt15.58■□□□□ 0.08
SWI1P09547 IMT1tM(CAU)O1 72 nt15.58■□□□□ 0.08
SWI1P09547 IMT2tM(CAU)P 72 nt15.58■□□□□ 0.08
SWI1P09547 FUN26YAL022C 1554 nt15.56■□□□□ 0.08
SWI1P09547 TRM9YML014W 840 nt15.5■□□□□ 0.07
SWI1P09547 YLR281CYLR281C 468 nt15.45■□□□□ 0.06
SWI1P09547 PUS2YGL063W 1113 nt15.41■□□□□ 0.06
SWI1P09547 WHI5YOR083W 888 nt15.4■□□□□ 0.06
SWI1P09547 CCT6YDR188W 1641 nt15.36■□□□□ 0.05
SWI1P09547 YPS1YLR120C 1710 nt15.26■□□□□ 0.03
SWI1P09547 ALF1YNL148C 765 nt15.25■□□□□ 0.03
SWI1P09547 YDR095CYDR095C 411 nt15.21■□□□□ 0.03
SWI1P09547 YLR154C-GYLR154C-G 150 nt15.2■□□□□ 0.02
SWI1P09547 SUF2tP(AGG)C 72 nt15.17■□□□□ 0.02
SWI1P09547 SUF10tP(AGG)N 72 nt15.17■□□□□ 0.02
SWI1P09547 YPR011CYPR011C 981 nt15.16■□□□□ 0.02
SWI1P09547 YLR236CYLR236C 324 nt15.15■□□□□ 0.02
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms