RNA–Protein interactions for RNA: YDR266C

HEL2, Transcript of RING finger ubiquitin ligase (E3), yeast

Gene HEL2, Length 1,920 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HEL2	YDR266C	TAF1	P46677	1066 aa		10.43	□□□□□ -0.74
HEL2	YDR266C	TRL1	P09880	827 aa	Known RBP	10.43	□□□□□ -0.74
HEL2	YDR266C	CDC48	P25694	835 aa	Known RBP	10.43	□□□□□ -0.74
HEL2	YDR266C	RTG3	P38165	486 aa		10.43	□□□□□ -0.74
HEL2	YDR266C	SHC1	P39000	512 aa		10.42	□□□□□ -0.74
HEL2	YDR266C	ASI1	P54074	624 aa		10.42	□□□□□ -0.74
HEL2	YDR266C	YML119W	Q03208	357 aa		10.42	□□□□□ -0.74
HEL2	YDR266C	RRP9	Q06506	573 aa	Known RBP	10.42	□□□□□ -0.74
HEL2	YDR266C	TSR1	Q07381	788 aa	Known RBP	10.42	□□□□□ -0.74
HEL2	YDR266C	CHS5	Q12114	671 aa	Known RBP	10.42	□□□□□ -0.74
HEL2	YDR266C	RAV1	P47104	1357 aa		10.42	□□□□□ -0.74
HEL2	YDR266C	RNR2	P09938	399 aa	Known RBP	10.41	□□□□□ -0.74
HEL2	YDR266C	CDC10	P25342	322 aa	Known RBP	10.41	□□□□□ -0.74
HEL2	YDR266C	LHS1	P36016	881 aa		10.41	□□□□□ -0.74
HEL2	YDR266C	TAF5	P38129	798 aa		10.41	□□□□□ -0.74
HEL2	YDR266C	ORM1	P53224	222 aa		10.41	□□□□□ -0.74
HEL2	YDR266C	NOC3	Q07896	663 aa	Predicted RBP	10.41	□□□□□ -0.74
HEL2	YDR266C	DRS2	P39524	1355 aa		10.41	□□□□□ -0.74
HEL2	YDR266C	SWC3	P31376	625 aa		10.41	□□□□□ -0.74
HEL2	YDR266C	YEL1	P34225	687 aa		10.41	□□□□□ -0.74
HEL2	YDR266C	MUD2	P36084	527 aa	Known RBP	10.41	□□□□□ -0.74
HEL2	YDR266C	YIR042C	P40586	236 aa		10.41	□□□□□ -0.74
HEL2	YDR266C	ILM1	P47155	203 aa		10.41	□□□□□ -0.74
HEL2	YDR266C	PMR1	P13586	950 aa		10.4	□□□□□ -0.74
HEL2	YDR266C	CLB4	P24871	460 aa		10.4	□□□□□ -0.74
HEL2	YDR266C	MET4	P32389	672 aa		10.4	□□□□□ -0.74
HEL2	YDR266C	CCT5	P40413	562 aa	Known RBP	10.4	□□□□□ -0.74
HEL2	YDR266C	VID28	P40547	921 aa		10.4	□□□□□ -0.74
HEL2	YDR266C	EIS1	Q05050	843 aa	Known RBP	10.4	□□□□□ -0.74
HEL2	YDR266C	TY1B-DR3	Q99231	1755 aa		10.4	□□□□□ -0.75
HEL2	YDR266C	RME1	P32338	300 aa	Known RBP	10.39	□□□□□ -0.75
HEL2	YDR266C	MRX12	P47084	519 aa		10.39	□□□□□ -0.75
HEL2	YDR266C	RBA50	Q04418	439 aa		10.39	□□□□□ -0.75
HEL2	YDR266C	NKP2	Q06162	153 aa		10.39	□□□□□ -0.75
HEL2	YDR266C	SDH5	Q08230	162 aa		10.39	□□□□□ -0.75
HEL2	YDR266C	RUD3	Q12234	484 aa	Known RBP	10.39	□□□□□ -0.75
HEL2	YDR266C	HXT13	P39924	564 aa		10.39	□□□□□ -0.75
HEL2	YDR266C	STE23	Q06010	1027 aa		10.39	□□□□□ -0.75
HEL2	YDR266C	KRE5	P22023	1365 aa		10.38	□□□□□ -0.75
HEL2	YDR266C	ECM4	P36156	370 aa		10.38	□□□□□ -0.75
HEL2	YDR266C	SRL3	P36167	246 aa		10.38	□□□□□ -0.75
HEL2	YDR266C	BTN2	P53286	410 aa		10.38	□□□□□ -0.75
HEL2	YDR266C	YNL247W	P53852	767 aa	Known RBP	10.38	□□□□□ -0.75
HEL2	YDR266C	SEC5	P89102	971 aa		10.38	□□□□□ -0.75
HEL2	YDR266C	YDR341C	Q05506	607 aa	Known RBP	10.38	□□□□□ -0.75
HEL2	YDR266C	SFH1	Q06168	426 aa		10.38	□□□□□ -0.75
HEL2	YDR266C	TRS33	Q99394	268 aa		10.38	□□□□□ -0.75
HEL2	YDR266C	GAL11	P19659	1081 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	DAL7	P21826	554 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	CSE1	P33307	960 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	TFC3	P34111	1160 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	RTR1	P40084	226 aa	Predicted RBP	10.37	□□□□□ -0.75
HEL2	YDR266C	BET4	Q00618	327 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	DPL1	Q05567	589 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	CLF1	Q12309	687 aa	Predicted RBP	10.37	□□□□□ -0.75
HEL2	YDR266C	PDR11	P40550	1411 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	10.37	□□□□□ -0.75	not detected
HEL2	YDR266C	BUD14	P27637	709 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	PDB1	P32473	366 aa	Known RBP	10.37	□□□□□ -0.75
HEL2	YDR266C	YKR018C	P36114	725 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	YSW1	P38280	609 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	RRP46	P53256	223 aa	Predicted RBP	10.37	□□□□□ -0.75
HEL2	YDR266C	RIA1	P53893	1110 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	FMP30	Q02883	468 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	MMR1	Q06324	491 aa		10.37	□□□□□ -0.75
HEL2	YDR266C	FAR1	P21268	830 aa		10.36	□□□□□ -0.75
HEL2	YDR266C	PTH2	P34222	208 aa		10.36	□□□□□ -0.75
HEL2	YDR266C	DSL1	P53847	754 aa		10.36	□□□□□ -0.75
HEL2	YDR266C	FAR8	Q05040	523 aa		10.36	□□□□□ -0.75
HEL2	YDR266C	MET7	Q08645	548 aa		10.36	□□□□□ -0.75
HEL2	YDR266C	SWI1	P09547	1314 aa		10.36	□□□□□ -0.75
HEL2	YDR266C	PDR12	Q02785	1511 aa		10.36	□□□□□ -0.75
HEL2	YDR266C	PRT1	P06103	763 aa	Known RBP	10.35	□□□□□ -0.75
HEL2	YDR266C	GCD2	P12754	651 aa	Predicted RBP	10.35	□□□□□ -0.75
HEL2	YDR266C	SCT1	P32784	759 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	CCT4	P39078	528 aa	Known RBP	10.35	□□□□□ -0.75
HEL2	YDR266C	OSW7	P43611	510 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	YOR223W	Q12015	292 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	SNT2	P53127	1403 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	SUI3	P09064	285 aa	Known RBP	10.35	□□□□□ -0.75
HEL2	YDR266C	TUP1	P16649	713 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	VPS53	P47061	822 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	NCS2	P53923	493 aa	Predicted RBP	10.35	□□□□□ -0.75
HEL2	YDR266C	HEF3	P53978	1044 aa	Known RBP	10.35	□□□□□ -0.75
HEL2	YDR266C	MFM1	Q02783	413 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	YKU80	Q04437	629 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	CTI6	Q08923	506 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	MAK21	Q12176	1025 aa	Known RBP	10.35	□□□□□ -0.75
HEL2	YDR266C	MCM16	Q12262	181 aa		10.35	□□□□□ -0.75
HEL2	YDR266C	PDR1	P12383	1068 aa		10.34	□□□□□ -0.75
HEL2	YDR266C	SPE2	P21182	396 aa		10.34	□□□□□ -0.75
HEL2	YDR266C	SEC20	P28791	383 aa		10.34	□□□□□ -0.75
HEL2	YDR266C	ECM32	P32644	1121 aa	Known RBP	10.34	□□□□□ -0.75
HEL2	YDR266C	ATG14	P38270	344 aa		10.34	□□□□□ -0.75
HEL2	YDR266C	SYH1	Q02875	849 aa	Known RBP	10.34	□□□□□ -0.75
HEL2	YDR266C	MRD1	Q06106	887 aa	Known RBP	10.34	□□□□□ -0.75
HEL2	YDR266C	SIR4	P11978	1358 aa		10.34	□□□□□ -0.75
HEL2	YDR266C	FRS2	P15625	503 aa	Known RBP	10.33	□□□□□ -0.76
HEL2	YDR266C	RPO26	P20435	155 aa		10.33	□□□□□ -0.76
HEL2	YDR266C	CPS1	P27614	576 aa		10.33	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms