Protein–RNA interactions for Protein: Q04437

YKU80, ATP-dependent DNA helicase II subunit 2, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKU80Q04437 NSR1YGR159C 1245 nt19.27■□□□□ 0.68
YKU80Q04437 YML009W-BYML009W-B 477 nt19.11■□□□□ 0.65
YKU80Q04437 NOP1YDL014W 984 nt18.44■□□□□ 0.54
YKU80Q04437 MDJ1YFL016C 1536 nt17.45■□□□□ 0.38
YKU80Q04437 YKL036CYKL036C 393 nt16.75■□□□□ 0.27
YKU80Q04437 YJL027CYJL027C 417 nt16.11■□□□□ 0.17
YKU80Q04437 SRX1YKL086W 384 nt16.07■□□□□ 0.16
YKU80Q04437 Q0297Q0297 156 nt15.98■□□□□ 0.15
YKU80Q04437 SSA3YBL075C 1950 nt15.67■□□□□ 0.1
YKU80Q04437 YCR051WYCR051W 669 nt15.27■□□□□ 0.04
YKU80Q04437 DBP2YNL112W 1641 nt15.24■□□□□ 0.03
YKU80Q04437 SCS3YGL126W 1143 nt15.15■□□□□ 0.02
YKU80Q04437 YBR190WYBR190W 312 nt15.06■□□□□ 0
YKU80Q04437 TRN1tP(UGG)A 72 nt14.71□□□□□ -0.05
YKU80Q04437 SUF9tP(UGG)F 72 nt14.71□□□□□ -0.05
YKU80Q04437 SUF8tP(UGG)H 72 nt14.71□□□□□ -0.05
YKU80Q04437 tP(UGG)LtP(UGG)L 72 nt14.71□□□□□ -0.05
YKU80Q04437 SUF7tP(UGG)M 72 nt14.71□□□□□ -0.05
YKU80Q04437 tP(UGG)N1tP(UGG)N1 72 nt14.71□□□□□ -0.05
YKU80Q04437 tP(UGG)N2tP(UGG)N2 72 nt14.71□□□□□ -0.05
YKU80Q04437 tP(UGG)O1tP(UGG)O1 72 nt14.71□□□□□ -0.05
YKU80Q04437 SUF11tP(UGG)O2 72 nt14.71□□□□□ -0.05
YKU80Q04437 RTC3YHR087W 336 nt14.69□□□□□ -0.06
YKU80Q04437 CCC1YLR220W 969 nt14.66□□□□□ -0.06
YKU80Q04437 YOL085CYOL085C 342 nt14.5□□□□□ -0.09
YKU80Q04437 PUT4YOR348C 1884 nt14.4□□□□□ -0.1
YKU80Q04437 RVS167YDR388W 1449 nt14.35□□□□□ -0.11
YKU80Q04437 RPP1BYDL130W 321 nt14.34□□□□□ -0.11
YKU80Q04437 PKP1YIL042C 1185 nt14.27□□□□□ -0.13
YKU80Q04437 SCJ1YMR214W 1134 nt14.1□□□□□ -0.15
YKU80Q04437 ARE1YCR048W 1833 nt13.86□□□□□ -0.19
YKU80Q04437 SPT5YML010W 3192 nt13.86□□□□□ -0.19
YKU80Q04437 POA1YBR022W 534 nt13.84□□□□□ -0.19
YKU80Q04437 tP(UGG)O3tP(UGG)O3 72 nt13.83□□□□□ -0.2
YKU80Q04437 SSA4YER103W 1929 nt13.75□□□□□ -0.21
YKU80Q04437 PET122YER153C 765 nt13.74□□□□□ -0.21
YKU80Q04437 BSC6YOL137W 1494 nt13.73□□□□□ -0.21
YKU80Q04437 SHR5YOL110W 714 nt13.71□□□□□ -0.21
YKU80Q04437 YHR049C-AYHR049C-A 297 nt13.66□□□□□ -0.22
YKU80Q04437 URN1YPR152C 1398 nt13.58□□□□□ -0.24
YKU80Q04437 SAH1YER043C 1350 nt13.56□□□□□ -0.24
YKU80Q04437 SCR1SCR1 522 nt13.55□□□□□ -0.24
YKU80Q04437 ATS1YAL020C 1002 nt13.51□□□□□ -0.25
YKU80Q04437 DEP1YAL013W 1218 nt13.49□□□□□ -0.25
YKU80Q04437 OPI9YLR338W 858 nt13.42□□□□□ -0.26
YKU80Q04437 YDJ1YNL064C 1230 nt13.37□□□□□ -0.27
YKU80Q04437 BDF1YLR399C 2061 nt13.35□□□□□ -0.27
YKU80Q04437 RRN5YLR141W 1092 nt13.33□□□□□ -0.28
YKU80Q04437 RPN10YHR200W 807 nt13.31□□□□□ -0.28
YKU80Q04437 Q0182Q0182 405 nt13.29□□□□□ -0.28
YKU80Q04437 BUD23YCR047C 828 nt13.23□□□□□ -0.29
YKU80Q04437 YNL208WYNL208W 600 nt13.22□□□□□ -0.29
YKU80Q04437 GAR1YHR089C 618 nt13.17□□□□□ -0.3
YKU80Q04437 TAT1YBR069C 1860 nt13.14□□□□□ -0.31
YKU80Q04437 PUN1YLR414C 792 nt13.06□□□□□ -0.32
YKU80Q04437 YER088W-BYER088W-B 147 nt13.04□□□□□ -0.32
YKU80Q04437 PAC11YDR488C 1602 nt13.02□□□□□ -0.33
YKU80Q04437 PTC2YER089C 1395 nt12.99□□□□□ -0.33
YKU80Q04437 MEP2YNL142W 1500 nt12.98□□□□□ -0.33
YKU80Q04437 RSB1YOR049C 1065 nt12.97□□□□□ -0.33
YKU80Q04437 NAB2YGL122C 1578 nt12.94□□□□□ -0.34
YKU80Q04437 YJR018WYJR018W 363 nt12.93□□□□□ -0.34
YKU80Q04437 DCW1YKL046C 1350 nt12.77□□□□□ -0.37
YKU80Q04437 TIR1YER011W 765 nt12.73□□□□□ -0.37
YKU80Q04437 FIS1YIL065C 468 nt12.73□□□□□ -0.37
YKU80Q04437 NVJ2YPR091C 2313 nt12.72□□□□□ -0.37
YKU80Q04437 YBR220CYBR220C 1683 nt12.67□□□□□ -0.38
YKU80Q04437 FPR4YLR449W 1179 nt12.63□□□□□ -0.39
YKU80Q04437 MOT3YMR070W 1473 nt12.63□□□□□ -0.39
YKU80Q04437 SSA1YAL005C 1929 nt12.62□□□□□ -0.39
YKU80Q04437 RPP2BYDR382W 333 nt12.61□□□□□ -0.39
YKU80Q04437 DAL1YIR027C 1383 nt12.6□□□□□ -0.39
YKU80Q04437 YPS1YLR120C 1710 nt12.59□□□□□ -0.39
YKU80Q04437 YJR120WYJR120W 351 nt12.56□□□□□ -0.4
YKU80Q04437 EMI2YDR516C 1503 nt12.56□□□□□ -0.4
YKU80Q04437 PST2YDR032C 597 nt12.55□□□□□ -0.4
YKU80Q04437 INM2YDR287W 879 nt12.52□□□□□ -0.41
YKU80Q04437 PHO4YFR034C 939 nt12.51□□□□□ -0.41
YKU80Q04437 YMR090WYMR090W 684 nt12.48□□□□□ -0.41
YKU80Q04437 YHR165W-AYHR165W-A 312 nt12.46□□□□□ -0.41
YKU80Q04437 SDH1YKL148C 1923 nt12.42□□□□□ -0.42
YKU80Q04437 PCH2YBR186W 1695 nt12.41□□□□□ -0.42
YKU80Q04437 YDL221WYDL221W 552 nt12.39□□□□□ -0.43
YKU80Q04437 GUT2YIL155C 1950 nt12.39□□□□□ -0.43
YKU80Q04437 YDR095CYDR095C 411 nt12.37□□□□□ -0.43
YKU80Q04437 YBL100CYBL100C 315 nt12.34□□□□□ -0.43
YKU80Q04437 SRB2YHR041C 633 nt12.29□□□□□ -0.44
YKU80Q04437 SEC11YIR022W 504 nt12.29□□□□□ -0.44
YKU80Q04437 CAC2YML102W 1407 nt12.28□□□□□ -0.44
YKU80Q04437 BDH2YAL061W 1254 nt12.25□□□□□ -0.45
YKU80Q04437 PIB2YGL023C 1908 nt12.22□□□□□ -0.45
YKU80Q04437 PTP1YDL230W 1008 nt12.22□□□□□ -0.45
YKU80Q04437 SCC4YER147C 1875 nt12.19□□□□□ -0.46
YKU80Q04437 FUN26YAL022C 1554 nt12.18□□□□□ -0.46
YKU80Q04437 TRM9YML014W 840 nt12.13□□□□□ -0.47
YKU80Q04437 ALF1YNL148C 765 nt12.13□□□□□ -0.47
YKU80Q04437 WWM1YFL010C 636 nt12.11□□□□□ -0.47
YKU80Q04437 RPP2AYOL039W 321 nt12.11□□□□□ -0.47
YKU80Q04437 IRC15YPL017C 1500 nt12.11□□□□□ -0.47
YKU80Q04437 SHU1YHL006C 453 nt12.05□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms