Protein–RNA interactions for Protein: P09880

TRL1, tRNA ligase, yeastyeast

Known RBP Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRL1P09880 YML009W-BYML009W-B 477 nt23.76■■□□□ 1.39
TRL1P09880 NSR1YGR159C 1245 nt23.71■■□□□ 1.39
TRL1P09880 NOP1YDL014W 984 nt22.86■■□□□ 1.25
TRL1P09880 MDJ1YFL016C 1536 nt21.45■■□□□ 1.02
TRL1P09880 YKL036CYKL036C 393 nt20.95■□□□□ 0.94
TRL1P09880 SRX1YKL086W 384 nt20.03■□□□□ 0.8
TRL1P09880 Q0297Q0297 156 nt19.99■□□□□ 0.79
TRL1P09880 YJL027CYJL027C 417 nt19.65■□□□□ 0.74
TRL1P09880 YCR051WYCR051W 669 nt19.05■□□□□ 0.64
TRL1P09880 SCS3YGL126W 1143 nt19.02■□□□□ 0.64
TRL1P09880 DBP2YNL112W 1641 nt18.88■□□□□ 0.61
TRL1P09880 TRN1tP(UGG)A 72 nt18.28■□□□□ 0.52
TRL1P09880 SUF9tP(UGG)F 72 nt18.28■□□□□ 0.52
TRL1P09880 SUF8tP(UGG)H 72 nt18.28■□□□□ 0.52
TRL1P09880 tP(UGG)LtP(UGG)L 72 nt18.28■□□□□ 0.52
TRL1P09880 SUF7tP(UGG)M 72 nt18.28■□□□□ 0.52
TRL1P09880 tP(UGG)N1tP(UGG)N1 72 nt18.28■□□□□ 0.52
TRL1P09880 tP(UGG)N2tP(UGG)N2 72 nt18.28■□□□□ 0.52
TRL1P09880 tP(UGG)O1tP(UGG)O1 72 nt18.28■□□□□ 0.52
TRL1P09880 SUF11tP(UGG)O2 72 nt18.28■□□□□ 0.52
TRL1P09880 YOL085CYOL085C 342 nt18.21■□□□□ 0.51
TRL1P09880 YBR190WYBR190W 312 nt18.2■□□□□ 0.5
TRL1P09880 CCC1YLR220W 969 nt18.19■□□□□ 0.5
TRL1P09880 PKP1YIL042C 1185 nt18.06■□□□□ 0.48
TRL1P09880 RPP1BYDL130W 321 nt17.96■□□□□ 0.47
TRL1P09880 RTC3YHR087W 336 nt17.86■□□□□ 0.45
TRL1P09880 SCJ1YMR214W 1134 nt17.58■□□□□ 0.4
TRL1P09880 RVS167YDR388W 1449 nt17.51■□□□□ 0.39
TRL1P09880 PET122YER153C 765 nt17.26■□□□□ 0.35
TRL1P09880 tP(UGG)O3tP(UGG)O3 72 nt17.24■□□□□ 0.35
TRL1P09880 ATS1YAL020C 1002 nt16.93■□□□□ 0.3
TRL1P09880 SHR5YOL110W 714 nt16.9■□□□□ 0.3
TRL1P09880 SCR1SCR1 522 nt16.88■□□□□ 0.29
TRL1P09880 PUT4YOR348C 1884 nt16.8■□□□□ 0.28
TRL1P09880 RRN5YLR141W 1092 nt16.74■□□□□ 0.27
TRL1P09880 DEP1YAL013W 1218 nt16.65■□□□□ 0.26
TRL1P09880 URN1YPR152C 1398 nt16.64■□□□□ 0.25
TRL1P09880 YDJ1YNL064C 1230 nt16.6■□□□□ 0.25
TRL1P09880 SAH1YER043C 1350 nt16.45■□□□□ 0.22
TRL1P09880 ARE1YCR048W 1833 nt16.45■□□□□ 0.22
TRL1P09880 YER088W-BYER088W-B 147 nt16.4■□□□□ 0.22
TRL1P09880 OPI9YLR338W 858 nt16.4■□□□□ 0.22
TRL1P09880 GAR1YHR089C 618 nt16.38■□□□□ 0.21
TRL1P09880 RSB1YOR049C 1065 nt16.29■□□□□ 0.2
TRL1P09880 POA1YBR022W 534 nt16.29■□□□□ 0.2
TRL1P09880 SSA3YBL075C 1950 nt16.22■□□□□ 0.19
TRL1P09880 YHR049C-AYHR049C-A 297 nt16.21■□□□□ 0.19
TRL1P09880 YNL208WYNL208W 600 nt16.21■□□□□ 0.19
TRL1P09880 RPN10YHR200W 807 nt16.18■□□□□ 0.18
TRL1P09880 BSC6YOL137W 1494 nt15.95■□□□□ 0.14
TRL1P09880 PUN1YLR414C 792 nt15.86■□□□□ 0.13
TRL1P09880 BUD23YCR047C 828 nt15.84■□□□□ 0.13
TRL1P09880 YJR018WYJR018W 363 nt15.83■□□□□ 0.12
TRL1P09880 PTC2YER089C 1395 nt15.82■□□□□ 0.12
TRL1P09880 TIR1YER011W 765 nt15.81■□□□□ 0.12
TRL1P09880 SSA1YAL005C 1929 nt15.74■□□□□ 0.11
TRL1P09880 PST2YDR032C 597 nt15.73■□□□□ 0.11
TRL1P09880 Q0182Q0182 405 nt15.69■□□□□ 0.1
TRL1P09880 YJR120WYJR120W 351 nt15.65■□□□□ 0.1
TRL1P09880 NAB2YGL122C 1578 nt15.58■□□□□ 0.08
TRL1P09880 SRB2YHR041C 633 nt15.56■□□□□ 0.08
TRL1P09880 MOT3YMR070W 1473 nt15.42■□□□□ 0.06
TRL1P09880 FIS1YIL065C 468 nt15.41■□□□□ 0.06
TRL1P09880 SPT5YML010W 3192 nt15.4■□□□□ 0.06
TRL1P09880 FPR4YLR449W 1179 nt15.38■□□□□ 0.05
TRL1P09880 RPP2BYDR382W 333 nt15.36■□□□□ 0.05
TRL1P09880 DAL1YIR027C 1383 nt15.34■□□□□ 0.05
TRL1P09880 PHO4YFR034C 939 nt15.23■□□□□ 0.03
TRL1P09880 INM2YDR287W 879 nt15.22■□□□□ 0.03
TRL1P09880 SHU1YHL006C 453 nt15.19■□□□□ 0.02
TRL1P09880 WWM1YFL010C 636 nt15.14■□□□□ 0.01
TRL1P09880 YAL037C-BYAL037C-B 975 nt15.12■□□□□ 0.01
TRL1P09880 YBL100CYBL100C 315 nt15.11■□□□□ 0.01
TRL1P09880 BDH2YAL061W 1254 nt15.06■□□□□ 0
TRL1P09880 YPS1YLR120C 1710 nt15.01□□□□□ -0.01
TRL1P09880 MEP2YNL142W 1500 nt14.97□□□□□ -0.01
TRL1P09880 FUN26YAL022C 1554 nt14.94□□□□□ -0.02
TRL1P09880 YKL097CYKL097C 411 nt14.93□□□□□ -0.02
TRL1P09880 SSA4YER103W 1929 nt14.92□□□□□ -0.02
TRL1P09880 YHR165W-AYHR165W-A 312 nt14.86□□□□□ -0.03
TRL1P09880 YDR095CYDR095C 411 nt14.85□□□□□ -0.03
TRL1P09880 HOM6YJR139C 1080 nt14.85□□□□□ -0.03
TRL1P09880 MNP1YGL068W 585 nt14.84□□□□□ -0.03
TRL1P09880 DCW1YKL046C 1350 nt14.83□□□□□ -0.04
TRL1P09880 YGR021WYGR021W 873 nt14.81□□□□□ -0.04
TRL1P09880 TRM9YML014W 840 nt14.81□□□□□ -0.04
TRL1P09880 LSM3YLR438C-A 270 nt14.79□□□□□ -0.04
TRL1P09880 YFL021C-AYFL021C-A 855 nt14.77□□□□□ -0.05
TRL1P09880 ALF1YNL148C 765 nt14.71□□□□□ -0.05
TRL1P09880 CCT6YDR188W 1641 nt14.69□□□□□ -0.06
TRL1P09880 PTP1YDL230W 1008 nt14.63□□□□□ -0.07
TRL1P09880 RKM5YLR137W 1104 nt14.63□□□□□ -0.07
TRL1P09880 CAC2YML102W 1407 nt14.59□□□□□ -0.07
TRL1P09880 RPP2AYOL039W 321 nt14.56□□□□□ -0.08
TRL1P09880 EMI2YDR516C 1503 nt14.55□□□□□ -0.08
TRL1P09880 SIS1YNL007C 1059 nt14.53□□□□□ -0.08
TRL1P09880 SUF2tP(AGG)C 72 nt14.49□□□□□ -0.09
TRL1P09880 SUF10tP(AGG)N 72 nt14.49□□□□□ -0.09
TRL1P09880 YOR139CYOR139C 393 nt14.49□□□□□ -0.09
TRL1P09880 ART5YGR068C 1761 nt14.42□□□□□ -0.1
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms