RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C RPL19BP0CX83 189 aaPredicted RBP6.62□□□□□ -1.35
SSK22YCR073C YGL081WP53156 320 aa6.62□□□□□ -1.35
SSK22YCR073C SHM1P37292 490 aaPredicted RBP6.62□□□□□ -1.35
SSK22YCR073C PKH3Q03306 898 aaPredicted RBP6.62□□□□□ -1.35
SSK22YCR073C RPN7Q06103 429 aaKnown RBP6.62□□□□□ -1.35
SSK22YCR073C VAS1P07806 1104 aaKnown RBP6.61□□□□□ -1.35
SSK22YCR073C MRC1P25588 1096 aa6.61□□□□□ -1.35
SSK22YCR073C VPS41P38959 992 aa6.61□□□□□ -1.35
SSK22YCR073C TSR3Q12094 313 aaKnown RBP6.61□□□□□ -1.35
SSK22YCR073C MATALPHA2P0CY08 210 aa6.61□□□□□ -1.35
SSK22YCR073C HMLALPHA2P0CY09 210 aa6.61□□□□□ -1.35
SSK22YCR073C TLG2Q08144 397 aa6.61□□□□□ -1.35
SSK22YCR073C TMA16Q08687 178 aa6.61□□□□□ -1.35
SSK22YCR073C ELG1Q12050 791 aa6.61□□□□□ -1.35
SSK22YCR073C SRP54P20424 541 aaKnown RBP6.6□□□□□ -1.35
SSK22YCR073C YBR287WP38355 427 aa6.6□□□□□ -1.35
SSK22YCR073C MSH4P40965 878 aaPredicted RBP6.6□□□□□ -1.35
SSK22YCR073C MRP7P12687 371 aa6.6□□□□□ -1.35
SSK22YCR073C MUD2P36084 527 aaKnown RBP6.6□□□□□ -1.35
SSK22YCR073C RGD1P38339 666 aa6.6□□□□□ -1.35
SSK22YCR073C VPS4P52917 437 aa6.6□□□□□ -1.35
SSK22YCR073C SPO22P40511 975 aa6.59□□□□□ -1.35
SSK22YCR073C INP54Q08227 384 aaKnown RBP6.59□□□□□ -1.35
SSK22YCR073C SES1P07284 462 aaKnown RBP6.59□□□□□ -1.35
SSK22YCR073C YGL242CP53066 181 aa6.59□□□□□ -1.35
SSK22YCR073C SRC1Q03707 834 aa6.59□□□□□ -1.35
SSK22YCR073C YOR223WQ12015 292 aa6.59□□□□□ -1.35
SSK22YCR073C LPD1P09624 499 aaKnown RBP6.59□□□□□ -1.36
SSK22YCR073C UBP12P39538 1254 aa6.59□□□□□ -1.36
SSK22YCR073C CTF4Q01454 927 aa6.59□□□□□ -1.36
SSK22YCR073C RAD4P14736 754 aa6.58□□□□□ -1.36
SSK22YCR073C AOS1Q06624 347 aa6.58□□□□□ -1.36
SSK22YCR073C DNM1P54861 757 aa6.58□□□□□ -1.36
SSK22YCR073C PGA3Q12746 312 aaKnown RBP6.58□□□□□ -1.36
SSK22YCR073C DCD1P06773 312 aa6.57□□□□□ -1.36
SSK22YCR073C KTR1P27810 393 aaKnown RBP6.57□□□□□ -1.36
SSK22YCR073C FBP26P32604 452 aa6.57□□□□□ -1.36
SSK22YCR073C RTT107P38850 1070 aa6.57□□□□□ -1.36
SSK22YCR073C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
SSK22YCR073C PRP31P49704 494 aaPredicted RBP6.57□□□□□ -1.36
SSK22YCR073C MAL13P53338 473 aa6.57□□□□□ -1.36
SSK22YCR073C ATG9Q12142 997 aa6.57□□□□□ -1.36
SSK22YCR073C PMD1P32634 1753 aa6.57□□□□□ -1.36
SSK22YCR073C ESC2Q06340 456 aa6.57□□□□□ -1.36
SSK22YCR073C UGA3P26370 528 aa6.56□□□□□ -1.36
SSK22YCR073C HSP104P31539 908 aaKnown RBP6.56□□□□□ -1.36
SSK22YCR073C SWE1P32944 819 aa6.56□□□□□ -1.36
SSK22YCR073C FLO1P32768 1537 aa6.56□□□□□ -1.36
SSK22YCR073C UBC1P21734 215 aaKnown RBP6.56□□□□□ -1.36
SSK22YCR073C PTC4P38089 393 aa6.56□□□□□ -1.36
SSK22YCR073C ALF1P53904 254 aa6.55□□□□□ -1.36
SSK22YCR073C UBP16Q02863 499 aa6.55□□□□□ -1.36
SSK22YCR073C BBC1P47068 1157 aa6.55□□□□□ -1.36
SSK22YCR073C AI2P03876 854 aa6.55□□□□□ -1.36
SSK22YCR073C YHL017WP38745 532 aa6.55□□□□□ -1.36
SSK22YCR073C BRE1Q07457 700 aaKnown RBP6.55□□□□□ -1.36
SSK22YCR073C VPS8P39702 1274 aa6.54□□□□□ -1.36
SSK22YCR073C CAF130P53280 1122 aaPredicted RBP6.54□□□□□ -1.36
SSK22YCR073C DEP1P31385 405 aa6.54□□□□□ -1.36
SSK22YCR073C EFM4P40516 257 aa6.54□□□□□ -1.36
SSK22YCR073C UBP10P53874 792 aaPredicted RBP6.54□□□□□ -1.36
SSK22YCR073C VTC3Q02725 835 aa6.54□□□□□ -1.36
SSK22YCR073C ARG8P18544 423 aa6.54□□□□□ -1.36
SSK22YCR073C SAP190P36123 1033 aa6.54□□□□□ -1.36
SSK22YCR073C SEC9P40357 651 aa6.54□□□□□ -1.36
SSK22YCR073C VID28P40547 921 aa6.54□□□□□ -1.36
SSK22YCR073C HUL4P40985 892 aa6.54□□□□□ -1.36
SSK22YCR073C YPR204WQ08995 1032 aa6.53□□□□□ -1.36
SSK22YCR073C DCS2Q12123 353 aa6.53□□□□□ -1.36
SSK22YCR073C PIF1P07271 859 aa6.53□□□□□ -1.36
SSK22YCR073C URA1P28272 314 aaPredicted RBP6.53□□□□□ -1.36
SSK22YCR073C ECM32P32644 1121 aaKnown RBP6.53□□□□□ -1.36
SSK22YCR073C RIM101P33400 625 aa6.53□□□□□ -1.36
SSK22YCR073C RMD1Q03441 430 aa6.53□□□□□ -1.36
SSK22YCR073C ISW2Q08773 1120 aa6.53□□□□□ -1.36
SSK22YCR073C KCC4P25389 1037 aa6.52□□□□□ -1.37
SSK22YCR073C BUD16P39988 312 aa6.52□□□□□ -1.37
SSK22YCR073C CST6P40535 587 aa6.52□□□□□ -1.37
SSK22YCR073C HFM1P51979 1187 aa6.52□□□□□ -1.37
SSK22YCR073C CUE3P53137 624 aaKnown RBP6.52□□□□□ -1.37
SSK22YCR073C SGD1Q06132 899 aa6.52□□□□□ -1.37
SSK22YCR073C SSK22P25390 1331 aaPredicted RBP6.52□□□□□ -1.37
SSK22YCR073C KAR5Q04746 504 aa6.52□□□□□ -1.37
SSK22YCR073C PTC5Q12511 572 aa6.52□□□□□ -1.37
SSK22YCR073C PYC1P11154 1178 aaKnown RBP6.52□□□□□ -1.37
SSK22YCR073C VPS75P53853 264 aa6.52□□□□□ -1.37
SSK22YCR073C RNT1Q02555 471 aa6.52□□□□□ -1.37
SSK22YCR073C RCR1P38212 213 aa6.51□□□□□ -1.37
SSK22YCR073C RFC5P38251 354 aa6.51□□□□□ -1.37
SSK22YCR073C NGL3Q03210 505 aa6.51□□□□□ -1.37
SSK22YCR073C RIF1P29539 1916 aa6.51□□□□□ -1.37
SSK22YCR073C DPB3P27344 201 aa6.51□□□□□ -1.37
SSK22YCR073C MFT1P33441 392 aaKnown RBP6.51□□□□□ -1.37
SSK22YCR073C CLB1P24868 471 aa6.51□□□□□ -1.37
SSK22YCR073C MSH3P25336 1018 aa6.51□□□□□ -1.37
SSK22YCR073C YJR079WP47126 109 aa6.51□□□□□ -1.37
SSK22YCR073C MAK10Q02197 733 aa6.51□□□□□ -1.37
SSK22YCR073C SEC23P15303 768 aaKnown RBP6.5□□□□□ -1.37
SSK22YCR073C SLA1P32790 1244 aa6.5□□□□□ -1.37
SSK22YCR073C PSK2Q08217 1101 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms