Protein–RNA interactions for Protein: P07271

PIF1, ATP-dependent DNA helicase PIF1, yeastyeast

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PIF1P07271 YML009W-BYML009W-B 477 nt24.58■■□□□ 1.53
PIF1P07271 NSR1YGR159C 1245 nt24.18■■□□□ 1.46
PIF1P07271 NOP1YDL014W 984 nt23.96■■□□□ 1.43
PIF1P07271 YKL036CYKL036C 393 nt22.26■■□□□ 1.15
PIF1P07271 MDJ1YFL016C 1536 nt21.32■■□□□ 1
PIF1P07271 Q0297Q0297 156 nt20.97■□□□□ 0.95
PIF1P07271 SRX1YKL086W 384 nt20.89■□□□□ 0.93
PIF1P07271 YJL027CYJL027C 417 nt20.85■□□□□ 0.93
PIF1P07271 SCS3YGL126W 1143 nt20.33■□□□□ 0.85
PIF1P07271 YCR051WYCR051W 669 nt19.91■□□□□ 0.78
PIF1P07271 YOL085CYOL085C 342 nt19.25■□□□□ 0.67
PIF1P07271 PKP1YIL042C 1185 nt18.98■□□□□ 0.63
PIF1P07271 DBP2YNL112W 1641 nt18.87■□□□□ 0.61
PIF1P07271 RPP1BYDL130W 321 nt18.84■□□□□ 0.61
PIF1P07271 TRN1tP(UGG)A 72 nt18.76■□□□□ 0.59
PIF1P07271 SUF9tP(UGG)F 72 nt18.76■□□□□ 0.59
PIF1P07271 SUF8tP(UGG)H 72 nt18.76■□□□□ 0.59
PIF1P07271 tP(UGG)LtP(UGG)L 72 nt18.76■□□□□ 0.59
PIF1P07271 SUF7tP(UGG)M 72 nt18.76■□□□□ 0.59
PIF1P07271 tP(UGG)N1tP(UGG)N1 72 nt18.76■□□□□ 0.59
PIF1P07271 tP(UGG)N2tP(UGG)N2 72 nt18.76■□□□□ 0.59
PIF1P07271 tP(UGG)O1tP(UGG)O1 72 nt18.76■□□□□ 0.59
PIF1P07271 SUF11tP(UGG)O2 72 nt18.76■□□□□ 0.59
PIF1P07271 CCC1YLR220W 969 nt18.66■□□□□ 0.58
PIF1P07271 ATS1YAL020C 1002 nt18.24■□□□□ 0.51
PIF1P07271 SCJ1YMR214W 1134 nt18.22■□□□□ 0.51
PIF1P07271 YBR190WYBR190W 312 nt18.11■□□□□ 0.49
PIF1P07271 PET122YER153C 765 nt17.98■□□□□ 0.47
PIF1P07271 RVS167YDR388W 1449 nt17.91■□□□□ 0.46
PIF1P07271 SCR1SCR1 522 nt17.9■□□□□ 0.46
PIF1P07271 tP(UGG)O3tP(UGG)O3 72 nt17.83■□□□□ 0.44
PIF1P07271 RTC3YHR087W 336 nt17.81■□□□□ 0.44
PIF1P07271 RRN5YLR141W 1092 nt17.49■□□□□ 0.39
PIF1P07271 SHR5YOL110W 714 nt17.27■□□□□ 0.36
PIF1P07271 RSB1YOR049C 1065 nt17.24■□□□□ 0.35
PIF1P07271 YDJ1YNL064C 1230 nt17.22■□□□□ 0.35
PIF1P07271 YER088W-BYER088W-B 147 nt17.13■□□□□ 0.33
PIF1P07271 GAR1YHR089C 618 nt16.88■□□□□ 0.29
PIF1P07271 PST2YDR032C 597 nt16.83■□□□□ 0.28
PIF1P07271 DEP1YAL013W 1218 nt16.77■□□□□ 0.28
PIF1P07271 URN1YPR152C 1398 nt16.69■□□□□ 0.26
PIF1P07271 RPN10YHR200W 807 nt16.53■□□□□ 0.24
PIF1P07271 YNL208WYNL208W 600 nt16.5■□□□□ 0.23
PIF1P07271 OPI9YLR338W 858 nt16.37■□□□□ 0.21
PIF1P07271 YKL097CYKL097C 411 nt16.34■□□□□ 0.21
PIF1P07271 TIR1YER011W 765 nt16.28■□□□□ 0.2
PIF1P07271 SAH1YER043C 1350 nt16.25■□□□□ 0.19
PIF1P07271 PUT4YOR348C 1884 nt16.25■□□□□ 0.19
PIF1P07271 SHU1YHL006C 453 nt16.12■□□□□ 0.17
PIF1P07271 ARE1YCR048W 1833 nt16.02■□□□□ 0.16
PIF1P07271 SSA1YAL005C 1929 nt16■□□□□ 0.15
PIF1P07271 YJR018WYJR018W 363 nt15.93■□□□□ 0.14
PIF1P07271 PUN1YLR414C 792 nt15.93■□□□□ 0.14
PIF1P07271 YHR049C-AYHR049C-A 297 nt15.88■□□□□ 0.13
PIF1P07271 YAL037C-BYAL037C-B 975 nt15.85■□□□□ 0.13
PIF1P07271 POA1YBR022W 534 nt15.82■□□□□ 0.12
PIF1P07271 SRB2YHR041C 633 nt15.73■□□□□ 0.11
PIF1P07271 RPP2BYDR382W 333 nt15.71■□□□□ 0.11
PIF1P07271 PTC2YER089C 1395 nt15.71■□□□□ 0.11
PIF1P07271 YJR120WYJR120W 351 nt15.63■□□□□ 0.09
PIF1P07271 WWM1YFL010C 636 nt15.59■□□□□ 0.09
PIF1P07271 BUD23YCR047C 828 nt15.58■□□□□ 0.08
PIF1P07271 YOR139CYOR139C 393 nt15.58■□□□□ 0.08
PIF1P07271 YGR021WYGR021W 873 nt15.57■□□□□ 0.08
PIF1P07271 NPL3YDR432W 1245 nt15.5■□□□□ 0.07
PIF1P07271 HOM6YJR139C 1080 nt15.48■□□□□ 0.07
PIF1P07271 MNP1YGL068W 585 nt15.47■□□□□ 0.07
PIF1P07271 NAB2YGL122C 1578 nt15.46■□□□□ 0.07
PIF1P07271 SSA3YBL075C 1950 nt15.44■□□□□ 0.06
PIF1P07271 BSC6YOL137W 1494 nt15.42■□□□□ 0.06
PIF1P07271 BDH2YAL061W 1254 nt15.37■□□□□ 0.05
PIF1P07271 FPR4YLR449W 1179 nt15.35■□□□□ 0.05
PIF1P07271 INM2YDR287W 879 nt15.33■□□□□ 0.04
PIF1P07271 YFL021C-AYFL021C-A 855 nt15.33■□□□□ 0.04
PIF1P07271 DAL1YIR027C 1383 nt15.3■□□□□ 0.04
PIF1P07271 YOL037CYOL037C 354 nt15.29■□□□□ 0.04
PIF1P07271 RKM5YLR137W 1104 nt15.28■□□□□ 0.04
PIF1P07271 YBL100CYBL100C 315 nt15.23■□□□□ 0.03
PIF1P07271 FIS1YIL065C 468 nt15.22■□□□□ 0.03
PIF1P07271 LSM3YLR438C-A 270 nt15.2■□□□□ 0.02
PIF1P07271 PHO4YFR034C 939 nt15.15■□□□□ 0.02
PIF1P07271 TRM9YML014W 840 nt15.09■□□□□ 0.01
PIF1P07271 FUN26YAL022C 1554 nt15.05■□□□□ -0
PIF1P07271 tM(CAU)CtM(CAU)C 72 nt14.97□□□□□ -0.01
PIF1P07271 IMT4tM(CAU)E 72 nt14.97□□□□□ -0.01
PIF1P07271 IMT3tM(CAU)J3 72 nt14.97□□□□□ -0.01
PIF1P07271 IMT1tM(CAU)O1 72 nt14.97□□□□□ -0.01
PIF1P07271 IMT2tM(CAU)P 72 nt14.97□□□□□ -0.01
PIF1P07271 YLR281CYLR281C 468 nt14.88□□□□□ -0.03
PIF1P07271 CCT6YDR188W 1641 nt14.86□□□□□ -0.03
PIF1P07271 PUS2YGL063W 1113 nt14.86□□□□□ -0.03
PIF1P07271 ALF1YNL148C 765 nt14.86□□□□□ -0.03
PIF1P07271 WHI5YOR083W 888 nt14.85□□□□□ -0.03
PIF1P07271 SUF2tP(AGG)C 72 nt14.79□□□□□ -0.04
PIF1P07271 SUF10tP(AGG)N 72 nt14.79□□□□□ -0.04
PIF1P07271 YPS1YLR120C 1710 nt14.75□□□□□ -0.05
PIF1P07271 YDR095CYDR095C 411 nt14.69□□□□□ -0.06
PIF1P07271 YLR154C-GYLR154C-G 150 nt14.68□□□□□ -0.06
PIF1P07271 YHR165W-AYHR165W-A 312 nt14.65□□□□□ -0.06
PIF1P07271 YJL152WYJL152W 360 nt14.58□□□□□ -0.08
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms